Briha
Ansari | Karen
Bandeen-Roche | Joshua
Betz | Brian
Caffo | Nilanjan
Chatterjee | Elizabeth
Chin | Gwendolyn
Clemens | Elizabeth Colantuoni (Johnson) | Leonardo
Collado Torres | Ciprian Crainiceanu| Frank
Curriero | Abhirup
Datta | Marie
Diener-West | Lacey
Etzkorn | Constantine
Frangakis | Adrian
Gherman | Andre
Hackman | Kasper
Hansen | Stephanie
Hicks | Hongkai
Ji | Sophia
Li | Ximin
Li | Martin
Lindquist | Thomas
Louis | John
McGready | Babak
Moghadas | John
Muschelli | Akihiko
Nishimura | Daniel
Obeng | Elizabeth
Ogburn | | Chathurangi
Pathiravasan | Michael
Rosenblum | Ingo
Ruczinski | Ahmed
Sabit | Patrick
Sadil | Ziling
Shen | Elizabeth
Stuart | Elizabeth
Sugar | Margaret
Taub | Carol
Thompson | Richard
Thompson | Jiayi
(Jessie) Tong | Jiangxia
Wang | Mei-Cheng
Wang | Erik
Westlund | Gayane
Yenokyan | Scott
Zeger | Ni
Zhao | Weiqiang
(Ken) Zhou | Vadim
Zipunnikov
Briha Ansari (go
to top of document)
Leroux
A, Crainiceanu C, Zeger S, Taub M, Ansari B, Wager TD, Bayman E, Coffey
C, Langefeld C, McCarthy R, Tsodikov A, Brummet C, Clauw DJ, Edwards RR, Lindquist MA, A2CPS Consortium: Statistical modeling of acute
and chronic pain patient-reported outcomes obtained from ecological momentary
assessment. Pain 165(9):1955-1965, 2024.
Karen
Bandeen-Roche (go
to top of document)
Crepeau PK, Sutton W, Sahli Z, Fedorova T, Russell
JO, Zeiger MA, Bandeen-Roche K, Walston JD, Morris-Wiseman LF, Mathur A:
Prevalence and risk factors
for dysphagia in older adults after thyroid and parathyroid surgery. Surgery
175(1):99-106, 2024.
Kitzman DW, Halter JB, Bandeen-Roche K: The Pepper Older Americans
Independence Centers: an NIA-sponsored program for improving physical function
among older persons. J Am Geriatr Soc
72(5):1586-1589, 2024.
Moon KA, Poulsen MN, Bandeen-Roche K, Hirsch
AG, DeWalle J, Pollak J, Schwartz BS: Community profiles in
northeastern and central Pennsylvania characterized by distinct social,
natural, food, and physical activity environments and their relation to type 2
diabetes. Environ Epidemiol 8(5):e328, 2024.
Schumock
G, Bandeen-Roche K, Chia CW, Kalyani RR, Ferrucci L, Varadhan
R: Nonlinear modeling of
oral glucose tolerance test response to evaluate associations with aging
outcomes. PLoS One 19(5):e0302381,
2024.
Sesso J, Walston J, Bandeen-Roche K, Wu C,
Bertoni AG, Shah S, Lima JAC, Ambale-Venkatesh B: Association of cardiovascular
fibrosis, remodeling, and dysfunction with frailty, prefrailty, and functional
performance: the Multi-Ethnic Study of Atherosclerosis. J Gerontol A
Biol Sci Med Sci 79(8):glae142, 2024.
Szanton
SL, Alexander KA, Kim B, Li Q, Gee GC, Bandeen-Roche KJ, Adkins-Jackson
PB, Hladek MD, Samuel LJ, Haozous EA, Okoye SM, Crews DC, Thorpe RJ Jr: Life space and activity space
measurement: making "room" for structural racism. Gerontologist
64(7):gnad160, 2024.
Varadhan
R, Zhu J, Bandeen-Roche K: Identifying predictors of
resilience to stressors in single-arm studies of pre-post change. Biostatistics
25(4):1094-1111, 2024.
Vohra V, Simonsick EM,
Kamath V, Bandeen-Roche K, Agrawal Y, Rowan NR: Physical
function trajectories and mortality in older adults with multisensory
impairment. JAMA Otolaryngol Head Neck Surg
150(3):217-225, 2024.
Abadir PM, Bandeen-Roche K, Bergeman C,
Bennett D, Davis D, Kind A, LeBrasseur N, Stern Y, Varadhan R,
Whitson HE: An overview of
the resilience world: Proceedings of the American Geriatrics Society and
National Institute on Aging State of Resilience Science Conference. J Am
Geriatr Soc 71(8):2381-2392, 2023.
Assi S, Garcia Morales EE, Windham BG, Lin FR, Bandeen-Roche
K, Shukla A, Palta P, Deal JA, Reed NS, Martinez-Amezcua P: Hearing loss and frailty among
older adults: the Atherosclerosis Risk in Communities Study. J Am Med
Dir Assoc 24(11):1683-1689, 2023.
Bandeen-Roche K, Tian J, Buta B, Walston J, Xue
QL: Substitution of
self-reported measures for objectively assessed grip strength and slow walk in
the Physical Frailty Phenotype: ramifications for validity. BMC Geriatr 23(1):451, 2023.
Crane BM, Bandeen-Roche K, Carlson MC: Exploring the relationship
between engagement in enriching early-life activities during adolescence and
cognition in later-life: results from the Health and Retirement Study. Res
Aging 45(2):198-209, 2023.
Goeddel LA, Murphy Z, Owodunni O, Esfandiary T,
Campbell D, Shay J, Tang O, Bandeen-Roche K, Gearhart S, Brown CH 4th: Domains of frailty predict
loss of independence in older adults after noncardiac surgery. Ann Surg 278(2):e226-e233,
2023.
Hirsch AG, Schwartz BS, Nordberg C, Tan BK,
Schleimer RP, Kern RC, Peters AT, Bandeen-Roche K, Lehmann AE: Risk of new-onset and
prevalent disease in chronic rhinosinusitis: A prospective cohort study. Int
Forum Allergy Rhinol 13(9):1715-1725, 2023.
Hladek MD, Wilson DH, Shofner S, Gross
AL, Buta B, Bandeen-Roche K, Schoenborn N: Resilient adaptation
strategies: unveiling older adults' coping dynamics amidst the COVID-19
pandemic. J Gerontol Nurs
49(12):32-39, 2023.
Keita Fakeye MB, Samuel
LJ, Drabo EF, Bandeen-Roche K, Wolff JL: Caregiving-related work
productivity loss among employed family and other unpaid caregivers of older
adults. Value Health 26(5):712-720, 2023.
Roth DL, Bentley JP, Mukaz DK, Haley WE, Walston
JD, Bandeen-Roche K: Transitions
to family caregiving and latent variables of systemic inflammation over time.
Res Aging 45(2):173-184, 2023.
Schwartz BS, Pollak JS, Bandeen-Roche K,
Hirsch AG, Lehmann AE, Kern RC, Tan BK, Kato A, Schleimer RP, Peters AT: Sinus inflammation and chronic
rhinosinusitis are associated with a diagnosis of new onset asthma in the
following year. Allergy 78(10):2659-2668, 2023.
Taylor JL, Clair CA, Gitlin LN, Atkins S, Bandeen-Roche
K, Abshire Saylor M, Hladek MD, Riser TJ, Thorpe RJ Jr, Szanton
SL: Acceptability and
feasibility of a pain and depressive symptoms management intervention in
middle-aged and older African American women. Innov
Aging 7(10):igad096, 2023.
Thornton CP, Bandeen-Roche K, Dolinar M,
Roberts Lavigne LC, George Lansey D, Jones R, Walston J, Varadhan
R, Hladek M, Imus P: Clinical
trial participation predicts improved survival in older adults receiving
allogeneic blood and marrow transplant. BMC Geriatr
23(1):120, 2023.
Walston J, Varadhan R,
Xue
QL, Buta B, Sieber F, Oni J, Imus P, Crews DC, Artz A, Schrack J, Kalyani RR,
Abadir P, Carlson M, Hladek M, McAdams-DeMarco M, Jones R, Johnson A, Shafi T,
Newman AB, Bandeen-Roche K: A Study of Physical Resilience
and Aging (SPRING): Conceptual framework, rationale, and study design. J
Am Geriatr Soc 71(8):2393-2405, 2023.
Wanigatunga AA, Chiu V, Cai Y, Urbanek
JK, Mitchell CM, Miller ER 3rd, Christenson RH, Rebuck H, Michos ED, Juraschek SP, Walston J, Xue
QL, Bandeen-Roche K, Appel LJ, Schrack JA: Patterns of daily physical
movement, chronic inflammation, and frailty incidence. Med Sci Sports Exerc 55(2):281-288, 2023.
Buta B, Zheng S, Langdon J, Adeosun B, Bandeen-Roche
K, Walston J, Xue
QL: Agreement between
standard and self-reported assessments of physical frailty syndrome and its
components in a registry of community-dwelling older adults. BMC Geriatr 22(1):705, 2022.
Clegg A, Bandeen-Roche K, Farrin A, Forster
A, Gill TM, Gladman J, Kerse N, Lindley R, McManus
RJ, Melis R, Mujica-Mota R, Raina P, Rockwood K, Teh
R, van der Windt D, Witham M: New
horizons in evidence-based care for older people: individual participant data
meta-analysis. Age Ageing 51(4):afac090, 2022.
Freedman VA, Bandeen-Roche K, Cornman JC,
Spillman BC, Kasper JD, Wolff JL: Incident care trajectories for
older adults with and without dementia. J Gerontol B Psychol Sci Soc Sci
77(Supplement_1):S21-S30, 2022.
Gorski-Steiner I, Bandeen-Roche K, Volk HE,
O'Dell S, Schwartz BS: The
association of unconventional natural gas development with diagnosis and
treatment of internalizing disorders among adolescents in Pennsylvania using
electronic health records. Environ Res 212(Pt A):113167, 2022.
Gorski-Steiner I, O'Dell S, Bandeen-Roche K,
Volk HE, Goes FS, Schwartz BS: Geographic disparities in new
onset of internalizing disorders in Pennsylvania adolescents using electronic
health records. Spat Spatiotemporal Epidemiol 41:100439, 2022.
Hirsch AG, Nordberg CM, Bandeen-Roche K,
Pollak J, Poulsen MN, Moon KA, Schwartz BS: Urban-rural differences in
health care utilization and COVID-19 outcomes in patients with type 2 diabetes.
Prev Chronic Dis 19:E44, 2022.
Hladek M, Gill JM, Lai C, Bandeen-Roche K, Xue
QL, Allen J, Leyden C, Kanefsky R, Szanton SL: High social coping
self-efficacy associated with lower sweat interleukin-6 in older adults with
chronic illness. J Appl Gerontol 41(2):581-589, 2022.
Hladek MD, Zhu J, Crews DC, McAdams-DeMarco MA,
Buta B, Varadhan
R, Shafi T, Walston JD, Bandeen-Roche K: Physical resilience phenotype
trajectories in incident hemodialysis: characterization and mortality risk
assessment. Kidney Int Rep 7(9):2006-2015, 2022.
Ijaz N, Buta B, Xue
QL, Mohess DT, Bushan A,
Tran H, Batchelor W, deFilippi CR, Walston JD, Bandeen-Roche
K, Forman DE, Resar JR, O'Connor CM, Gerstenblith G, Damluji AA: Interventions for frailty
among older adults with cardiovascular disease: JACC state-of-the-art review.
J Am Coll Cardiol 79(5):482-503, 2022.
Ip EH, Chen SH, Rejeski
WJ, Bandeen-Roche K, Hayden KM, Hugenschmidt
CE, Pierce J, Miller ME, Speiser JL, Kritchevsky SB,
Houston DK, Newton RL, Rapp SR, Kitzman DW: Gradient and acceleration of
decline in physical and cognitive functions in older adults: a disparity
analysis. J Gerontol A Biol Sci Med Sci 77(8):1603-1611, 2022.
LaFave SE, Bandeen-Roche K, Gee G, Thorpe
RJ, Li Q, Crews D, Samuel L, Cooke A, Hladek M, Szanton
SL: Quantifying older Black
Americans' exposure to structural racial discrimination: how can we measure the
water in which we swim? J Urban Health 99(5):794-802, 2022.
Laskow T, Zhu J, Buta B, Oni J, Sieber F, Bandeen-Roche
K, Walston J, Franklin PD, Varadhan
R: Risk factors for nonresilient outcomes in older adults after total knee
replacement. J Gerontol A Biol Sci Med Sci 77(9):1915-1922, 2022.
LeCroy MN, Potter LN, Bandeen-Roche K,
Bianco ME, Cappola AR, Carter EB, Dayan PS, Eckstrom E, Edwards DF, Farabi SS, Fisher SD, Giordano J, Hanson HA, Jenkins E,
Juhn Y, Kaskel F, Stake CE, Reeds DN, Schleiss MR, Wafford QE, McColley SA: Barriers to and solutions for
representative inclusion across the lifespan and in life course research: The
need for structural competency highlighted by the COVID-19 pandemic. J
Clin Transl Sci 7(1):e38, 2022.
Meeker MA, Schwartz BS, Bandeen-Roche K,
Hirsch AG, De Silva SSA, McAlexander TP, Black NC, McClure LA: Assessing measurement
invariance of a land use environment construct across levels of urbanicity.
Geohealth 6(10):e2022GH000667, 2022.
Moored KD, Bandeen-Roche K, Snitz BE, DeKosky ST, Williamson JD, Fitzpatrick AL,
Carlson MC: Risk of
dementia differs across lifestyle engagement subgroups: a latent class and
time-to-event analysis in community-dwelling older adults. J Gerontol B
Psychol Sci Soc Sci 77(5):872-884, 2022.
Nichols E, Deal JA, Swenor BK, Abraham
AG, Armstrong NM, Bandeen-Roche K, Carlson MC, Griswold
M, Lin FR, Mosley TH, Ramulu PY, Reed NS, Sharrett
AR, Gross
AL: The effect of missing
data and imputation on the detection of bias in cognitive testing using
differential item functioning methods. BMC Med Res Methodol
22(1):81, 2022.
Nkimbeng
M, Commodore-Mensah Y, Angel JL, Bandeen-Roche K, Thorpe RJ Jr, Han HR,
Winch PJ, Szanton SL: Longer residence in the United
States is associated with more physical function limitations in African
immigrant older adults. J Appl Gerontol 41(2):411-420, 2022.
Palta P, Griswold
M, Ranadive R, Bandeen-Roche K, Folsom AR, Petruski-Ivleva
N, Burgard S, Kucharska-Newton A, Windham BG: Midlife cardiovascular health
and robust versus frail late-life status: the Atherosclerosis Risk in
Communities Study. J Gerontol A Biol Sci Med Sci 77(6):1222-1229,
2022.
Petrovsky Doan LN, Loizos M, O'Conor R, Prochaska
M, Tsang M, Hopman-Droste R, Klinedinst TC, Mathur A, Bandeen-Roche K,
van der Willik O, Kritchevsky
SB: Key recommendations
from the 2021 "inclusion of older adults in clinical research"
workshop. J Clin Transl Sci 6(1):e55,
2022.
Schwartz BS, Kolak M, Pollak JS, Poulsen MN, Bandeen-Roche
K, Moon KA, DeWalle J, Siegel KR, Mercado CI,
Imperatore G, Hirsch AG: Associations
of four indexes of social determinants of health and two community typologies
with new onset type 2 diabetes across a diverse geography in Pennsylvania. PLoS One 17(9):e0274758, 2022.
Sezgin D, O'Donovan M, Woo J, Bandeen-Roche
K, Liotta G, et al: Early
identification of frailty: developing an international Delphi consensus on
pre-frailty. Arch Gerontol Geriatr
99:104586, 2022.
Chan T, Wanigatunga AA, Terracciano A, Carlson MC, Bandeen-Roche
K, Costa PT, Simonsick EM, Schrack JA: Traits and treadmills:
Association between personality and perceived fatigability in well-functioning
community-dwelling older adults. Psychol Aging 36(6):710-717, 2021.
Chu NM, Bandeen-Roche K, Xue
QL, Carlson MC, Sharrett AR, Gross
AL: Physical frailty
phenotype criteria and their synergistic association on cognitive functioning.
J Gerontol A Biol Sci Med Sci 76(9):1633-1642, 2021.
Chu NM, Xue
QL, McAdams-DeMarco MA, Carlson MC, Bandeen-Roche K, Gross
AL: Frailty-a risk factor
of global and domain-specific cognitive decline among a nationally
representative sample of community-dwelling older adult U.S. Medicare
beneficiaries. Age Ageing 50(5):1569-1577, 2021.
Damluji
AA, Chung
SE, Xue
QL, Hasan RK, Moscucci M, Forman DE, Bandeen-Roche
K, Batchelor W, Walston JD, Resar JR, Gerstenblith G:
Frailty and cardiovascular
outcomes in the National Health and Aging Trends Study. Eur
Heart J 42(37):3856-3865, 2021.
Damluji
AA, Chung SE, Xue
QL, Hasan RK, Walston JD, Forman DE, Bandeen-Roche K, Moscucci M, Batchelor W, Resar JR, Gerstenblith
G: Physical frailty
phenotype and the development of geriatric syndromes in older adults with
coronary heart disease. Am J Med 134(5):662-671, 2021.
Darrow JA, Calabro A, Gannon S, Orusakwe
A, Esquivel R, Traynham CJ, Rao A, Gulyani S, Khingelova K, Bandeen-Roche K, Albert M, Moghekar A: Effect of patient-specific preanalytic variables on CSF Aβ1-42 concentrations
measured on an automated chemiluminescent platform. J Appl Lab Med
6(2):397-408, 2021.
Fried LP, Cohen AA, Xue
QL, Walston J, Bandeen-Roche K, Varadhan
R: The physical frailty
syndrome as a transition from homeostatic symphony to cacophony. Nat
Aging 1(1):36-46, 2021.
Garibaldi BT, Fiksel
J, Muschelli J, Robinson ML, Rouhizadeh M, Perin J, Schumock
G, Nagy P, Gray JH, Malapati H, Ghobadi-Krueger M, Niessen TM, Kim BS, Hill PM,
Ahmed MS, Dobkin ED, Blanding R, Abele J, Woods B, Harkness K, Thiemann DR,
Bowring MG, Shah AB, Wang MC, Bandeen-Roche K, Rosen A, Zeger SL, Gupta
A: Patient trajectories
among persons hospitalized for COVID-19 : a cohort study. Ann Intern Med
174(1):33-41, 2021.
Garibaldi BT, Wang K, Robinson ML, Zeger SL, Bandeen-Roche
K, Wang MC, Alexander GC, Gupta A, Bollinger R, Xu Y: Comparison of time to clinical
improvement with vs without remdesivir treatment in hospitalized patients with
COVID-19. JAMA Netw Open 4(3):e213071,
2021.
Ghachem
A, Fried LP, Legault V, Bandeen-Roche K, Presse N, Gaudreau P, Cohen AA:
Evidence from two cohorts
for the frailty syndrome as an emergent state of parallel dysregulation in
multiple physiological systems. Biogerontology 22(1):63-79, 2021.
Griswold
ME, Talluri R, Zhu X, Su D, Tingle J, Gottesman RF, Deal J, Rawlings AM, Mosley
TH, Windham BG, Bandeen-Roche K: Reflection on modern methods:
shared-parameter models for longitudinal studies with missing data. Int
J Epidemiol 50(4):1384-1393, 2021.
Handing EP, Rapp SR, Chen SH, Rejeski
WJ, Wiberg M, Bandeen-Roche K, Craft S, Kitzman D, Ip EH: Heterogeneity in association
between cognitive function and gait speed among older adults: an integrative
data analysis study. J Gerontol A Biol Sci Med Sci 76(4):710-715,
2021.
Hladek MD, Zhu J, Buta BJ, Szanton
SL, Bandeen-Roche K, Walston JD, Xue
QL: Self-efficacy proxy
predicts frailty incidence over time in non-institutionalized older adults.
J Am Geriatr Soc 69(12):3507-3518, 2021.
Huisingh-Scheetz M, Buta B, Bandeen-Roche K,
Huang ES, Varadhan
R, Walston J, Wroblewski K, Schumm LP, Waite LJ: 2015-2016 Normative Data for
the 3-m usual walk, five repeated chair stands, and static balance components
of the SPPB among U.S. older adults across two nationally representative data
sets: NSHAP and NHATS. J Gerontol B Psychol Sci Soc Sci
76(Supplement_3):S299-S312, 2021.
Schwartz BS, Pollak J, Poulsen MN, Bandeen-Roche
K, Moon K, DeWalle J, Siegel K, Mercado C, Imperatore
G, Hirsch AG: Association
of community types and features in a case-control analysis of new onset type 2
diabetes across a diverse geography in Pennsylvania. BMJ Open
11(1):e043528, 2021.
Scully EP, Schumock
G, Fu
M, Massaccesi G, Muschelli J, Betz J, Klein EY, West
NE, Robinson M, Garibaldi BT, Bandeen-Roche K, Zeger S, Klein SL, Gupta
A: Sex and gender
differences in testing, hospital admission, clinical presentation, and drivers
of severe outcomes from COVID-19. Open Forum Infect Dis
8(9):ofab448, 2021.
Sedhom
R, Kuo
PL, Gupta A, Smith TJ, Chino F, Carducci MA, Bandeen-Roche K: Changes in the place of death
for older adults with cancer: Reason to celebrate or a risk for unintended
disparities? J Geriatr Oncol
12(3):361-367, 2021.
Sutton W, Genberg B, Prescott JD, Segev
DL, Zeiger MA, Bandeen-Roche K, Mathur A: Understanding surgical
decision-making in older adults with differentiated thyroid cancer: a discrete
choice experiment. Surgery 169(1):14-21, 2021.
Usher
T, Buta B, Thorpe RJ, Huang J, Samuel LJ, Kasper JD, Bandeen-Roche K: Dissecting the racial/ethnic
disparity in frailty in a nationally representative cohort study with respect
to health, income, and measurement. J Gerontol A Biol Sci Med Sci
76(1):69-76, 2021.
Wongvibulsin S, Garibaldi BT, Antar AAR, Wen
J, Wang MC, Gupta A, Bollinger R, Xu Y, Wang K, Betz JF, Muschelli J, Bandeen-Roche
K, Zeger SL, Robinson ML: Development
of Severe COVID-19 Adaptive Risk Predictor (SCARP), a calculator to predict
severe disease or death in hospitalized patients with COVID-19. Ann
Intern Med 174(6):777-785, 2021.
Xue
QL, Bandeen-Roche K, Tian J, Kasper JD, Fried LP: Progression of physical
frailty and the risk of all-cause mortality: is there a point of no return?
J Am Geriatr Soc 69(4):908-915, 2021.
Bandeen-Roche K, Gross
AL, Varadhan
R, Buta B, Carlson MC, Huisingh-Scheetz M, Mcadams-Demarco
M, Piggott DA, Brown TT, Hasan RK, Kalyani RR, Seplaki
CL, Walston JD, Xue
QL: Principles
and issues for physical frailty measurement and its clinical application. J
Gerontol A Biol Sci Med Sci 75(6):1107-1112, 2020.
Damluji
AA, Rodriguez G, Noel T, Davis L, Dahya V, Tehrani B, Epps K, Sherwood M, Sarin
E, Walston J, Bandeen-Roche K, Resar JR, Brown TT, Gerstenblith
G, O'Connor CM, Batchelor W: Sarcopenia
and health-related quality of life in older adults after transcatheter aortic
valve replacement. Am Heart J 224:171-181, 2020.
Deal JA, Power MC, Palta P, Alonso A, Schneider
ALC, Perryman K, Bandeen-Roche K, Sharrett AR: Relationship of cigarette
smoking and time of quitting with incident dementia and cognitive decline. J
Am Geriatr Soc 68(2):337-345, 2020.
Ge ML, Carlson MC, Bandeen-Roche K, Chu NM,
Tian J, Kasper JD, Xue
QL: U.S. national profile
of older adults with cognitive impairment alone, physical frailty alone, and
both. J Am Geriatr Soc 68(12):2822-2830,
2020.
Gross
AL, Carlson MC, Chu NM, McAdams-DeMarco MA, Mungas D,
Simonsick EM, Varadhan
R, Xue
QL, Walston J, Bandeen-Roche K: Derivation of a measure of
physiological multisystem dysregulation: Results from WHAS and Health ABC. Mech
Ageing Dev 188:111258, 2020.
Guralnik J, Bandeen-Roche K, Bhasin SAR, Eremenco S, Landi F, Muscedere J,
Perera S, Reginster JY, Woodhouse L, Vellas B: Clinically meaningful
change for physical performance: perspectives of the ICFSR Task Force. J
Frailty Aging 9(1):9-13, 2020.
Hirsch AG, Nordberg C, Bandeen-Roche K, Tan
BK, Schleimer RP, Kern RC, Sundaresan A, Pinto JM, Kennedy TL, Greene JS,
Kuiper JR, Schwartz BS: Radiologic
sinus inflammation and symptoms of chronic rhinosinusitis in a population-based
sample. Allergy 75(4):911-920, 2020.
Hladek MD, Gill J, Bandeen-Roche K, Walston
J, Allen J, Hinkle JL, Lorig K, Szanton SL: High coping self-efficacy
associated with lower odds of pre-frailty/frailty in older adults with chronic
disease. Aging Ment Health 24(12):1956-1962, 2020.
Ip EH, Chen SH, Bandeen-Roche K, Speiser JL,
Cai L, Houston DK: Longitudinal
partially ordered data analysis for preclinical sarcopenia. Stat Med
39(24):3313-3328, 2020.
Jock BWI, Bandeen
Roche K, Caldas SV, Redmond L, Fleischhacker S, Gittelsohn
J: Latent class analysis
offers insight into the complex food environments of Native American
communities: findings from the randomly selected OPREVENT2 trial baseline
sample. Int J Environ Res Public Health 17(4): E1237, 2020.
Lee MJ, Varadaraj V, Tian J, Bandeen-Roche
K, Swenor BK: The
association between frailty and uncorrected refractive error in older adults.
Ophthalmic Epidemiol 27(3):219-225, 2020.
Kuiper JR, Hirsch AG, Bandeen-Roche K,
Sundaresan AS, Tan BK, Kern RC, Schleimer RP, Schwartz BS: A new approach to
categorization of radiologic inflammation in chronic rhinosinusitis. PLoS One 15(6):e0235432, 2020.
McAlexander TP, Bandeen-Roche K, Buckley JP,
Pollak J, Michos ED, McEvoy JW, Schwartz BS: Unconventional natural gas
development and hospitalization for heart failure in Pennsylvania. J Am
Coll Cardiol 76(24):2862-2874, 2020.
Piggott DA, Bandeen-Roche K, Mehta SH, Brown
TT, Yang H, Walston JD, Leng SX, Kirk GD: Frailty transitions,
inflammation, and mortality among persons aging with HIV infection and
injection drug use. AIDS 34(8):1217-1225, 2020.
Swenor BK, Lee MJ, Tian J, Varadaraj V, Bandeen-Roche
K: Visual impairment and
frailty: examining an understudied relationship. J Gerontol A Biol Sci
Med Sci 75(3):596-602, 2020.
Van
Domelen DR, Bandeen-Roche K: A note on proposed estimation
procedures for claims-based frailty indexes. Am J Epidemiol
189(5):369-371, 2020.
Xue
QL, Tian J, Walston JD, Chaves PHM, Newman AB, Bandeen-Roche K: Discrepancy in frailty
identification: move beyond predictive validity. J Gerontol A Biol Sci Med Sci 75(2):387-393, 2020.
Chu NM, Bandeen-Roche
K, Tian J, Kasper JD, Gross
AL, Carlson MC, Xue
QL: Hierarchical
development of frailty and cognitive impairment: clues into etiological
pathways. J Gerontol A Biol Sci Med
Sci 74(11):1761-1770, 2019.
Chu NM, Gross
AL, Shaffer AA, Haugen CE, Norman SP, Xue
QL, Sharrett AR, Carlson MC, Bandeen-Roche
K, Segev
DL, McAdams-DeMarco MA: Frailty
and changes in cognitive function after kidney transplantation. J Am Soc Nephrol 30(2):336-345, 2019.
Clark DV, Banura P, Bandeen-Roche K, Liles WC, Kain KC,
Scheld WM, Moss WJ, Jacob ST: Biomarkers of endothelial
activation/dysfunction distinguish sub-groups of Ugandan patients with sepsis
and differing mortality risks. JCI
Insight 4(10):e127623, 2019.
Damluji
AA, Bandeen-Roche K, Berkower C, Boyd CM, Al-Damluji
MS, Cohen MG, Forman DE, Chaudhary R, Gerstenblith G,
Walston JD, Resar JR, Moscucci M: Percutaneous coronary
intervention in older patients with ST-segment elevation myocardial infarction
and cardiogenic shock. J Am Coll Cardiol 73(15):1890-1900, 2019.
Damluji
AA, Huang J, Bandeen-Roche K, Forman
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among older adults with acute myocardial infarction and outcomes from
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Deal JA, Sharrett AR, Albert M, Bandeen-Roche K, Burgard S, Thomas SD,
Gottesman RF, Knopman D, Mosley T, Klein B, Klein R: Retinal signs and risk of
incident dementia in the Atherosclerosis Risk in Communities study. Alzheimers Dement 15(3):477-486, 2019.
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H, Engelman
M, Bandeen-Roche K: Robust respondents and lost
limitations: the implications of nonrandom missingness for the estimation of
health trajectories. J Aging Health
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J, Bandeen-Roche K: Parametric estimation of
association in bivariate failure-time data subject to competing risks:
sensitivity to underlying assumptions. Lifetime
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Kuiper JR, Hirsch AG, Bandeen-Roche K, Sundaresan AS, Tan BK, Kern RC, Schleimer RP,
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indirect cost impacts of nasal and sinus symptoms and related conditions. J Occup Environ
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Varadaraj V, Lee MJ, Tian J, Ramulu
PY, Bandeen-Roche K, Swenor BK: Near vision impairment and
frailty: evidence of an association. Am
J Ophthalmol 208:234-241, 2019.
Varadhan
R, Russ DW, Gabr RE, Huang J, Kalyani RR, Xue
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of physical frailty to phosphocreatine recovery in muscle after mild exercise
stress in the oldest-old women. J
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Walker KA, Sharrett AR, Wu A, Schneider ALC, Albert
M, Lutsey PL, Bandeen-Roche
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Mosley TH, Gottesman RF: Association
of midlife to late-life blood pressure patterns with incident dementia. JAMA 322(6):535-545, 2019.
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frailty toward clinical practice: NIA Intramural Frailty Science Symposium
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Joshua
Betz (go
to top of document)
Buchholz A, Deme P, Betz JF, Brandt J,
Haughey N, Cervenka MC: A
randomized feasibility trial of the modified Atkins diet in older adults with
mild cognitive impairment due to Alzheimer's disease. Front Endocrinol
15:1182519, 2024.
Cai Y, Martinez-Amezcua P, Betz JF, et al: Hearing impairment and
physical activity and physical functioning in older ddults:
baseline results from the ACHIEVE Trial. J Gerontol A Biol Sci Med Sci 79(7):glae117,
2024.
Major Extremity Trauma Research Consortium (METRC)
(includes Betz J): Cognitive-behavioral-based
physical therapy for improving recovery after a traumatic lower-extremity
injury: the results of a randomized controlled trial. J Bone Joint Surg
Am 106(14):1300-1308, 2024.
Sanchez VA, Arnold ML, Betz JF, Reed NS, Faucette
S, Anderson E, et al: Description
of the baseline audiologic characteristics of the participants enrolled in the
Aging and Cognitive Health Evaluation in Elders Study. Am J Audiol 33(1):1-17, 2024.
Deal JA, Jiang
K, Betz JF, Clemens GD, Zhu J, Reed NS, Garibaldi BT, Swenor BK: COVID-19 clinical outcomes by
patient disability status: A retrospective cohort study. Disabil Health J 16(2):101441, 2023.
Garcia Morales EE, Croll PH, Palta P, Goedegebure A, Reed NS, Betz JF, Lin FR, Deal JA: Association of carotid
atherosclerosis with hearing loss: a cross-sectional analysis of the
Atherosclerosis Risk in Communities Study. JAMA Otolaryngol
Head Neck Surg 149(3):223-230, 2023.
Robinson ML, Morris CP, Betz JF, Zhang Y,
Bollinger R, Wang N, Thiemann DR, Fall A, Eldesouki
RE, Norton JM, Gaston DC, Forman M, Luo CH, Zeger SL, Gupta A, Garibaldi BT,
Mostafa HH: Impact of severe
acute respiratory syndrome coronavirus 2 variants on inpatient clinical outcome.
Clin Infect Dis 76(9):1539-1549, 2023.
Andersen KM, Joseph CS, Mehta HB, Streiff MB, Betz
JF, Bollinger RC Jr, Fisher AM, Gupta A, LeMaistre CF, Robinson ML, Xu Y, Ng
DK, Alexander GC, Garibaldi BT: Thromboprophylaxis in people
hospitalized with COVID-19: Assessing intermediate or standard doses in a
retrospective cohort study. Res Pract Thromb Haemost 6(5):e12753,
2022.
Archer KR, Davidson CA, Alkhoury
D, Vanston SW, Moore TL, Deluca A, Betz JF, Thompson RE, Obremskey WT, Slobogean GP,
Melton DH, Wilken JM, Karunakar MA, Rivera JC, Mir HR, McKinley TO, Frey KP,
Castillo RC, Wegener ST, METRC: Cognitive-Behavioral-Based
Physical Therapy for Improving Recovery After Traumatic Orthopaedic
Lower Extremity Injury (CBPT-Trauma). J Orthop
Trauma 36(Suppl 1):S1-S7, 2022.
Collaco JM, Raraigh KS, Betz
J, Aksit MA, Blau N, Brown J, Dietz HC, MacCarrick G,
Nogee LM, Sheridan MB, Vernon HJ, Beaty TH, Louis TA,
Cutting GR: Accurate
assignment of disease liability to genetic variants using only population data.
Genet Med 24(1):87-99, 2022.
Garcia Morales EE, Ting J, Gross
AL, Betz JF, Jiang K, Du S, Power MC, Reed NS, Sharrett AR, Lin FR, Deal
JA: Association of cigarette
smoking patterns over 30 years with audiometric hearing impairment and
speech-in-noise perception: the Atherosclerosis Risk in Communities Study. JAMA
Otolaryngol Head Neck Surg 148(3):243-251, 2022.
Garibaldi BT, Wang K, Robinson ML, Betz J,
Caleb Alexander G, Andersen KM, Joseph CS, Mehta HB, Korwek K, Sands KE, Fisher
AM, Bollinger RC, Xu Y: Real-world
effectiveness of remdesivir in adults hospitalized with coronavirus disease
2019 (COVID-19): a retrospective, multicenter comparative effectiveness study.
Clin Infect Dis 75(1):e516-e524, 2022.
Han H, Lin Z, Soldan A, Pettigrew C, Betz
JF, Oishi K, Li Y, Liu P, Albert M, Lu H: Longitudinal changes in global
cerebral blood flow in cognitively normal older adults: a phase-contrast MRI
study. J Magn Reson Imaging
56(5):1538-1545, 2022.
Kim AS, Betz JF, Albert M, Deal JA, Faucette
SP, Oh ES, Reed NS, Lin FR, Nieman CL: Accuracy of self- and
proxy-rated hearing among older adults with and without cognitive impairment.
J Am Geriatr Soc 70(2):490-500, 2022.
Kim AS, Betz JF, Reed NS, Ward BK, Nieman
CL: Prevalence of tympanic
membrane perforations among adolescents, adults, and older adults in the United
States. Otolaryngol Head Neck Surg
167(2):356-358, 2022.
Manabe YC, Betz J, Jackson O, Asoala V, et al: Clinical evaluation of the BioFire Global Fever Panel for the identification of
malaria, leptospirosis, chikungunya, and dengue from whole blood: a
prospective, multicentre, cross-sectional diagnostic
accuracy study. Lancet Infect Dis 22(9):1356-1364, 2022.
Nieman CL, Betz J, Garcia Morales EE, Suen
JJ, Trumbo J, Marrone N, Han HR, Szanton SL, Lin FR: Effect of a community health
worker-delivered personal sound amplification device on self-perceived
communication function in older adults with hearing loss: a randomized clinical
trial. JAMA 328(23):2324-2333, 2022.
Smith JR, Betz JF, Garcia EE, Jiang K,
Swenor BK, Reed NS, Deal JA: Self-reported
dual sensory impairment and subjective cognitive complaints among older adults
in the 2019 National Health Interview Survey. Am J Audiol
31(4):1202-1209, 2022.
Standeven LR, Osborne LM, Betz JF, Yenokyan
G, Voegtline K, Hantsoo L,
Payne JL: Allopregnanolone
and depression and anxiety symptoms across the peripartum: an exploratory study.
Arch Womens Ment Health 25(2):521-526, 2022.
Ting J, Jiang K, Du S, Betz J, Reed N, Power
MC, Gottesman R, Sharrett AR, Griswold
ME, Walker KA, Miller ER, Lin FR, Deal JA: Longitudinal blood pressure
patterns from mid- to late life and late-life hearing loss in the
Atherosclerosis Risk in Communities Study. J Gerontol A Biol Sci Med Sci
77(3):640-646, 2022.
Wright WF, Betz JF, Auwaerter PG: Prospective studies comparing
structured vs nonstructured diagnostic protocol evaluations among patients with
fever of unknown origin: a systematic review and meta-analysis. JAMA Netw Open 5(6):e2215000, 2022.
Yi JS, Garcia Morales EE, Betz JF, Deal JA,
Dean LT, Du S, Goman AM, Griswold
ME, Palta P, Rebok GW, Reed NS, Thorpe RJ, Lin FR, Nieman CL: Individual life-course
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2022.
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J): Longitudinal
transcriptomics define the stages of myeloid activation in the living human
brain after intracerebral hemorrhage. Sci Immunol 6(56):eabd6279,
2021.
Bowring MG, Wang
Z, Xu
Y, Betz J, Muschelli J, Garibaldi BT, Zeger SL: Outcome-stratified analysis of
biomarker trajectories for patients infected with severe acute respiratory
syndrome coronavirus 2. Am J Epidemiol 190(10):2094-2106, 2021.
Deal JA, Betz J, Lin
FR, Reed NS: Interpreting
results from epidemiologic studies. Semin Hear 42(1):3-9, 2021.
Goman AM, Gao T, Betz
J, Reed NS, Deal JA, Lin FR, ACHIEVE-P Study Group: Association of hearing loss
with physical, social, and mental activity engagement. Semin Hear
42(1):59-65, 2021.
Kim AS, Betz JF, Nieman CL, Hoyer MR,
Applebaum J, Lin FR, Goman AM: Long-term impact of hearing
aid provision or cochlear implantation on hearing handicap. Laryngoscope
131(5):1122-1126, 2021.
Scully EP, Schumock
G, Fu
M, Massaccesi G, Muschelli J, Betz J, Klein
EY, West NE, Robinson M, Garibaldi BT, Bandeen-Roche K, Zeger S, Klein SL,
Gupta A: Sex and gender
differences in testing, hospital admission, clinical presentation, and drivers
of severe outcomes from COVID-19. Open Forum Infect Dis
8(9):ofab448, 2021.
Steingrimsson
JA, Betz J, Qian
T, Rosenblum M: Optimized
adaptive enrichment designs for three-arm trials: learning which subpopulations
benefit from different treatments. Biostatistics 22(2):283-297,
2021.
Suen JJ, Betz J, Reed NS, Deal JA, Lin FR,
Goman AM: Prevalence of
asymmetric hearing among adults in the United States. Otol
Neurotol 42(2):e111-e113, 2021.
Wongvibulsin S, Garibaldi BT, Antar AAR, Wen
J, Wang MC, Gupta A, Bollinger R, Xu Y, Wang K, Betz JF, Muschelli J,
Bandeen-Roche K, Zeger SL, Robinson ML: Development of Severe COVID-19
Adaptive Risk Predictor (SCARP), a calculator to predict severe disease or
death in hospitalized patients with COVID-19. Ann Intern Med
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Wu HC, Thallmayer
T, Deal JA, Betz JF, Reed NS, Lin FR: Prevalence trends in hearing
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Armstrong NM, Deal JA, Betz J, Kritchevsky S, Pratt S, Harris T, Barry LC, Simonsick EM, Lin FR: Associations of hearing
loss and depressive symptoms with incident disability in older adults: Health,
Aging, and Body Composition Study. J Gerontol A Biol Sci Med Sci
75(3):531-536, 2020.
Kim AS, Betz JF, Goman AM, Poe DS, Reed NS,
Ward BK, Nieman CL: Prevalence
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146(8):763-765, 2020.
Kim SJ, Reed N, Betz JF, Abraham
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Risk in Communities Neurocognitive Study (ARIC-NCS). JAMA Otolaryngol Head Neck Surg 146(2):152-159, 2020.
Shah M, Paradis S, Betz J, Beylis N, Bharadwaj R, Caceres T, Gotuzzo
E, Joloba M, Mave V, Nakiyingi L, Nicol MP, Pradhan
N, King B, Armstrong D, Knecht D, Maus CE, Cooper CK, Dorman SE, Manabe YC: Multicenter study of the
accuracy of the BD MAX multidrug-resistant tuberculosis assay for detection of
Mycobacterium tuberculosis complex and mutations associated with resistance to
rifampin and isoniazid. Clin Infect Dis 71(5):1161-1167, 2020.
Afify A, Betz
JF, Riabinina O, Lahondere
C, Potter CJ: Commonly
used insect repellents hide human odors from anopheles mosquitoes. Curr Biol 29(21):3669-3680, 2019.
Applebaum J, Hoyer M, Betz J, Lin FR, Goman AM: Long-term subjective
loneliness in adults after hearing loss treatment. Int J Audiol 58(8):464-467, 2019.
Bailey CR, Arun A, Towsley M, Choi WK, Betz JF, MacKenzie S, Areda MA, Duvvuri M, Mitchell S, Weiss CR: MVP(TM) micro vascular plug systems for the treatment of pulmonary
arteriovenous malformations. Cardiovasc Intervent
Radiol 42(3):389-395, 2019.
DeLuca A, Betz
J, Bollinger R, Ray S, Manabe Y: Users beware! Biological
variation in complete blood counts over short time intervals. BMJ Evid Based Med 24(6):207-208, 2019.
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..., Betz JF, Sugar EA, et al: Efficacy and safety of
minimally invasive surgery with thrombolysis in intracerebral haemorrhage evacuation (MISTIE III): a randomised,
controlled, open-label, blinded endpoint phase 3 trial. Lancet 393(10175):1021-1032, 2019.
Osborne LM, Betz
JF, Yenokyan G, Standeven LR, Payne JL: The role of
allopregnanolone in pregnancy in predicting postpartum anxiety symptoms. Front Psychol 10:1033, 2019.
Reed NS, Betz
JF, Kucharska-Newton AM, Lin FR, Deal JA: Hearing loss and
satisfaction with healthcare: an unexplored relationship. J Am Geriatr Soc
67(3):624-626, 2019.
Reed NS, Huddle MG, Betz J, Power MC, Pankow JS, Gottesman R, Richey Sharrett A, Mosley
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Steinway SN, Tang
B, Telezing J, Ashok A, Kamal A, Yu CY, Jagtap N, Buxbaum JL, Elmunzer J, Wani SB, Khashab MA, Caffo BS, Akshintala VS: A machine learning-based
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proof-of-concept study. Endoscopy 56(3):165-171, 2024.
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B, Pramanik
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Tamashiro KL: Timing
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Crasta JE, Nebel MB, Svingos
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Beheshtian E, Jalilianhasanpour R, Modir
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Faria AV, Zhao Y,
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Gill RE, Tang
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Koenecke A, Powell M, Xiong R, Shen Z, Fischer N,
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Kelly JTD, Colantuoni E,
Robinson C, Decker MR: Quantifying
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Dougherty GB, Golden SH, Gross
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LA, Vasishta S, Haut ER, Colantuoni E, Needham DM, Dinglas
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in trauma intensive care unit (ICU) follow-up studies: a post-hoc analysis of a
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Gibbs SE, Kusunoki Y, Colantuoni E, Moreau C: Sexual activity and weekly
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violence in post-conflict Liberia. Glob
Public Health 14(12):1639-1652, 2019.
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DF, Mongodin EF, White JR, Voskertchian A, Hittle L, Colantuoni E, Milstone AM: Association between the
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CM, Colantuoni E, Needham DM,
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of acute respiratory failure. Thorax
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of a blood culture utilization intervention on antibiotic use in a pediatric
intensive care unit. Infect Control
Hosp Epidemiol 40(4):482-484, 2019.
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to work and lost earnings after acute respiratory distress syndrome: a 5-year
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E, Robinson C, Decker MR: From
the battlefield to the bedroom: a multilevel analysis of the links between
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Mroz TM, Meadow A, Colantuoni E, Leff B, Wolff JL: Home health agency
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Leonardo
Collado Torres (go
to top of document)
Benjamin KJM, Arora R, Feltrin
AS, Pertea G, Giles HH, Stolz JM, D'Ignazio L, Collado-Torres
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AE, Han S, Weinberger DR: Analysis
of gene expression in the postmortem brain of neurotypical Black Americans
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Emani PS, Liu JJ, Clarke D, ..., PsychENCODE Consortium (includes Collado Torres L): Single-cell genomics and
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dissection of the schizophrenia transcriptome. Science
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gene expression landscape of the human locus coeruleus revealed by
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in postmortem brain samples from patients with psychiatric disorders. Sci
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Eagles NJ, Wilton R, Jaffe
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a comprehensive database of introns across human tissues. Nucleic Acids
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B, Huuki-Myers LA, Grant-Peters M, Collado-Torres
L, Hicks SC: escheR: unified multi-dimensional visualizations with
Gestalt principles. Bioinform Adv
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LA, Montgomery KD, Kwon SH, Page SC, Hicks SC, Maynard KR, Collado-Torres
L: Data-driven
identification of total RNA expression genes for estimation of RNA abundance in
heterogeneous cell types highlighted in brain tissue. Genome Biol
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Hicks SC, Maynard KR: Challenges
and opportunities to computationally deconvolve heterogeneous tissue with
varying cell sizes using single-cell RNA-sequencing datasets. Genome
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an R/Bioconductor package to visualize spatially-resolved transcriptomics data.
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spatial gene expression in the human dorsolateral prefrontal cortex. Nat
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Wilton R, Collado-Torres L, Tao R, Eagles NJ, Szalay AS, Hyde TM,
Weinberger DR, Kleinman JE, Jaffe
AE: Characterizing the
dynamic and functional DNA methylation landscape in the developing human cortex.
Epigenetics 16(1):1-13, 2021.
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A, Huuki LA, Montgomery KD, Sadashivaiah
V, Tippani M, Barry BK, Hancock DB, Hicks SC,
Kleinman JE, Hyde TM, Collado-Torres L, Jaffe
AE, Martinowich K: Single-nucleus
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reward circuitry in the human brain. Neuron 109(19):3088-3103, 2021.
Wilks C, Ahmed O, Baker DN,
Zhang D, Collado-Torres L, Langmead B: Megadepth:
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SC, Chen FY, Charles R, Solomon B, Ling JP, Imada EL, Zhang D, Joseph L, Leek
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Burke EE, Chenoweth JG, Shin JH, Collado-Torres
L, et al: Dissecting
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Chavez J, Barberena-Jonas C, Sotelo-Fonseca JE,
Alquicira-Hernandez J, Salgado H, Collado-Torres L, Reyes A: Programmatic access to
bacterial regulatory networks with regutools. Bioinformatics
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Guelfi S, D'Sa KD, Botia
JA, ..., Collado-Torres L, et al: Regulatory sites for splicing
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Imada EL, Sanchez DF, Collado-Torres L, ..., Jaffe
AE, Leek JT, et al: Recounting
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and its genetic risk. Nat Neurosci
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Semick SA, Collado-Torres L, Markunas CA,
Shin JH, Deep-Soboslay A, Tao R, Huestis MA, Bierut LJ, Maher BS, Johnson EO,
Hyde TM, et al: Developmental
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transcriptome. Mol Psychiatry 25(12):3267-3277, 2020.
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L, et al: Incomplete
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complex neurogenetic disorders. Sci Adv 6(24):eaay8299, 2020.
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Shin JH, et al: Regional
heterogeneity in gene expression, regulation, and coherence in the frontal
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Madugundu AK, Na CH, Nirujogi RS, Renuse S, Kim KP,
Burns KH, Wilks C, Langmead B, Ellis
SE, Collado-Torres L, Halushka
MK, Kim MS, Pandey A: Integrated
transcriptomic and proteomic analysis of primary human umbilical vein
endothelial cells. Proteomics 19(15):e1800315, 2019.
Price AJ, Collado-Torres L, Ivanov NA, Xia W, et
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and a unique role of CpH methylation. Genome
Biol 20(1):196, 2019.
Semick SA, Bharadwaj RA, Collado-Torres L, Tao R, Shin JH,
Deep-Soboslay A, Weiss JR, Weinberger DR, Hyde TM, Kleinman JE, Jaffe
AE, Mattay
VS: Integrated DNA
methylation and gene expression profiling across multiple brain regions
implicate novel genes in Alzheimer's disease. Acta Neuropathol
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Wright C, Rajpurohit A, Burke EE, Williams C, Collado-Torres
L, Kimos M, Brandon NJ, Cross AJ, Jaffe
AE, Weinberger DR, Shin JH: Comprehensive assessment of
multiple biases in small RNA sequencing reveals significant differences in the
performance of widely used methods. BMC
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Ciprian
Crainiceanu
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to top of document)
Ballard ED, Greenstein D, Reiss PT, Crainiceanu
CM, Cui
E, Duncan WC Jr, Hejazi NS, Zarate CA Jr.: Functional changes in
sleep-related arousal after ketamine administration in individuals with
treatment-resistant depression. Transl
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Etzkorn LH, Heravi AS, Knuth ND, Wu KC, Post WS, Urbanek JK, Crainiceanu CM: Classification
of free-living body posture with ECG patch accelerometers: application to the
Multicenter AIDS Cohort Study. Stat Biosci
16:25-44, 2024.
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and chronic pain patient-reported outcomes obtained from ecological momentary
assessment. Pain 165(9):1955-1965, 2024.
Leroux
A, Cui
E, Smirnova E, Muschelli J, Schrack JA, Crainiceanu CM: NHANES 2011-2014: Objective
physical activity is the strongest predictor of all-cause mortality. Med
Sci Sports Exerc 56(10):1926-1934, 2024.
Marino FR, Wu HT, Etzkorn L, Rooney MR,
Soliman EZ, Deal JA, Crainiceanu C, Spira AP, Wanigatunga AA, Schrack
JA, Chen LY: Associations
of physical activity and heart rate variability from a two-week ECG monitor
with cognitive function and dementia: The ARIC Neurocognitive Study. Sensors
24(13):4060, 2024.
Yang KK, Rattsev
I, Lkhagvajav Z, Flaks-Manov N, Gorman K, Epstein JA,
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the pandemic at Johns Hopkins Medicine. JAMIA Open 7(4):ooae093,
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Cui
E, Li R, Crainiceanu CM, Xiao L:
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LJ, Crainiceanu CM, Roemmich RT, French MA: Identifying unique subgroups
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activity. J Am Heart Assoc 12(18):e030577, 2023.
Koffman
L, Zhang
Y, Harezlak J, Crainiceanu C, Leroux
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using wrist-worn accelerometers. Gait Posture 103:92-98, 2023.
Meng
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between objectively measured physical activity and multiple sclerosis in the UK
Biobank. Med Sci Sports Exerc
55(12):2194-2202, 2023.
Sergazinov R, Leroux
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I: A case study of glucose
levels during sleep using multilevel fast function on scalar regression
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Siddharthan T, Blair PW, Cui
E, Pearce J, Herrera P, Liu G, East J, Crainiceanu C, Clark DV, CCPSEI
Research Team, Clinical Characterisation Protocol for
Severe Infectious Diseases (CCPSEI) Research Team: Additive value of lung
ultrasound to clinical parameters for prognosticating COVID-19. ERJ Open
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Torbati ME, Minhas DS, Laymon CM,
Maillard P, Wilson JD, Chen CL, Crainiceanu CM, DeCarli CS, Hwang SJ, Tudorascu DL: MISPEL: A supervised deep
learning harmonization method for multi-scanner neuroimaging data. Med
Image Anal 89:102926, 2023.
Zhao
A, Cui
E, Leroux
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Hu M, Crainiceanu C, Schindler
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Stinner DJ, Bosse MJ, Karunakar MA, O'Toole RV, Carroll EA, Hak DJ, Hayda R, Alkhoury D, Schmidt AH, METRC: Defining incidence of acute
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Smirnova E, Mallow C, Muschelli J, Shao
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2022.
Cui
E, Crainiceanu CM, Leroux
A: Additive functional Cox
model. J Comput Graph Stat 30(3):780-793,
2021.
Durfee AZ, Sheppard SM, Meier EL,
Bunker L, Cui
E, Crainiceanu C, Hillis AE: Explicit training to improve
affective prosody recognition in adults with acute right hemisphere stroke.
Brain Sci 11(5):667, 2021.
Eshaghzadeh Torbati M, Minhas DS, Ahmad G,
O'Connor EE, Muschelli J, Laymon CM, Yang Z, Cohen AD, Aizenstein
HJ, Klunk WE, Christian BT, Hwang SJ, Crainiceanu CM, Tudorascu DL: A multi-scanner neuroimaging
data harmonization using RAVEL and ComBat. Neuroimage
245:118703, 2021.
Karas
M, Straczkiewicz M, Fadel W, Harezlak
J, Crainiceanu CM, Urbanek
JK: Adaptive empirical
pattern transformation (ADEPT) with application to walking stride segmentation.
Biostatistics 22(2):331-347, 2021.
Karas
M, Urbanek
JK, Illiano VP, Bogaarts G, Crainiceanu CM, Dorn JF: Estimation of free-living
walking cadence from wrist-worn sensor accelerometry data and its association
with SF-36 quality of life scores. Physiol
Meas 42(6):065006, 2021.
Kaufman MR, Dey
D, Crainiceanu C, Dredze M: #MeToo and Google inquiries
into sexual violence: a hashtag campaign can sustain information seeking. J
Interpers Violence 36(19-20):9857-9867, 2021.
Lambe J, Fitzgerald KC, Murphy OC, Filippatou AG, Sotirchos ES,
Kalaitzidis G, Vasileiou E, Pellegrini N, Ogbuokiri
E, Toliver B, Luciano NJ, Davis S, Fioravante N, Kwakyi
O, Risher H, Crainiceanu CM, Prince JL, Newsome SD, Mowry EM, Saidha S, Calabresi PA: Association
of spectral-domain OCT with long-term disability worsening in multiple
sclerosis. Neurology 96(16):e2058-e2069, 2021.
Leroux
A, Rzasa-Lynn R, Crainiceanu C, Sharma T: Wearable devices: current
status and opportunities in pain assessment and management. Digit Biomark 5(1):89-102, 2021.
Leroux
A, Xu
S, Kundu
P, Muschelli J, Smirnova E, Chatterjee N, Crainiceanu C: Quantifying the predictive
performance of objectively measured physical activity on mortality in the UK
Biobank. J Gerontol A Biol Sci Med Sci 76(8):1486-1494, 2021.
Malone SK, Patterson F, Grunin L,
Melkus GD, Riegel B, Punjabi N, Yu G, Urbanek
J, Crainiceanu C, Pack A: Habitual physical activity
patterns in a nationally representative sample of U.S. adults. Transl Behav Med
11(2):332-341, 2021.
Solhjoo S, Punjabi NM, Ivanescu
AE, Crainiceanu C, Gaynanova I, Wicken C, Buckenmaier C 3rd, Haigney MC: Methadone destabilizes cardiac
repolarization during sleep. Clin Pharmacol
Ther 110(4):1066-1074, 2021.
Yu X, Hao L, Crainiceanu C, Leroux
A: Occupational
determinants of physical activity at work: Evidence from wearable accelerometer
in 2005-2006 NHANES. SSM Popul Health
17:100989, 2021.
Benjamin-Neelon SE, Bai
J, Ostbye T, Neelon B, Pate RR, Crainiceanu C:
Physical activity and
adiposity in a racially diverse cohort of US infants. Obesity
28(3):631-637, 2020.
Carass A, Roy S, Gherman A, Reinhold JC,
Jesson A, Arbel T, Maier O, Handels H, Ghafoorian M, Platel B, Birenbaum A, Greenspan H, Pham DL, Crainiceanu
CM, Calabresi PA, Prince JL, Roncal WRG, Shinohara
RT, Oguz I: Evaluating
white matter lesion segmentations with refined Sorensen-Dice analysis. Sci
Rep 10(1):8242, 2020.
Crainiceanu CM, Crainiceanu A: The upstrap.
Biostatistics 21(2):e164-e166, 2020.
Filippatou AG, Lambe J, Sotirchos
ES, Fitzgerald KC, Aston A, Murphy OC, Pellegrini N, Fioravante N, Risher H, Ogbuokiri E, Kwakyi O, Toliver B,
Davis S, Luciano N, Crainiceanu C, Prince JL, Mowry EM, Calabresi PA, Saidha S: Association of body mass index
with longitudinal rates of retinal atrophy in multiple sclerosis. Mult
Scler 26(7):843-854, 2020.
Gherman A, Muschelli J, Caffo B, Crainiceanu
C: Rxnat:
An open-source R package for XNAT-based repositories. Front Neuroinform 14:572068, 2020.
Hannawi Y, Muschelli J, Mulder M, Sharrock M,
Storm C, Leithner C, Crainiceanu CM, Stevens RD: Postcardiac arrest neurological
prognostication with quantitative regional cerebral densitometry. Resuscitation
154:101-109, 2020.
Heravi AS, Etzkorn LH, Urbanek
JK, Crainiceanu CM, Punjabi NM,
Ashikaga H, Brown TT, Budoff MJ, D'Souza G, Magnani JW, Palella FJ Jr, Berger
RD, Wu KC, Post WS: HIV
infection is associated with variability in ventricular repolarization: the
Multicenter AIDS Cohort Study (MACS). Circulation
141(3):176-187, 2020.
Punjabi NM, Patil S, Crainiceanu
C, Aurora RN: Variability
and misclassification of sleep apnea severity based on multi-night testing.
Chest 158(1):365-373, 2020.
Smirnova E, Leroux
A, Cao Q, Tabacu L, Zipunnikov V, Crainiceanu C, Urbanek
JK: The predictive
performance of objective measures of physical activity derived from
accelerometry data for 5-year all-cause mortality in older adults: National
Health and Nutritional Examination Survey 2003-2006. J Gerontol A Biol
Sci Med Sci 75(9):1779-1785, 2020.
Sotirchos ES, Gonzalez-Caldito
N, Dewey BE, Fitzgerald KC, Glaister J, Filippatou A,
Ogbuokiri E, Feldman S, Kwakyi
O, Risher H, Crainiceanu C, Pham DL, Van Zijl PC, Mowry EM, Reich DS,
Prince JL, Calabresi PA, Saidha S: Effect of disease-modifying
therapies on subcortical gray matter atrophy in multiple sclerosis. Mult
Scler 26(3):312-321, 2020.
Sotirchos ES, Gonzalez Caldito
N, Filippatou A, Fitzgerald KC, Murphy OC, Lambe J,
Nguyen J, Button J, Ogbuokiri E, Crainiceanu
CM, Prince JL, Calabresi PA, Saidha S, International
Multiple Sclerosis Visual System (IMSVISUAL) Consortium: Progressive
multiple sclerosis is associated with faster and specific retinal layer atrophy.
Ann Neurol 87(6):885-896, 2020.
Tabacu L, Ledbetter M, Leroux
A, Crainiceanu C, Smirnova E: Quantifying the varying
predictive value of physical activity measures obtained from wearable
accelerometers on all-cause mortality over short to medium time horizons in
NHANES 2003-2006. Sensors 21(1):E4, 2020.
Ding T, Cohen AD, O'Connor EE, Karim
HT, Crainiceanu A, Muschelli J, Lopez O, Klunk WE, Aizenstein
HJ, Krafty R, Crainiceanu
CM, Tudorascu DL: An improved algorithm of
white matter hyperintensity detection in elderly adults. Neuroimage Clin 25:102151, 2019.
Johns
JT, Crainiceanu C, Zipunnikov V, Gellar
J: Variable-domain
functional principal component analysis. J Comp Graph Stat
28(4):993-1006, 2019.
Karas
M, Bai J, Straczkiewicz M, Harezlak
J, Glynn NW, Harris T, Zipunnikov V, Crainiceanu
C, Urbanek
JK: Accelerometry data
in health research: challenges and opportunities. Stat Biosci 11(2):210-237, 2019.
Kudchadkar SR, Aljohani
O, Johns
J, Leroux
A, Alsafi E, Jastaniah E, Gottschalk A, Shata NJ,
Al-Harbi A, Gergen D, Nadkarni A, Crainiceanu
C: Day-night activity in
hospitalized children after major surgery: an analysis of 2271 hospital days.
J Pediatr
209:190-197, 2019.
Leroux
A, Di
J, Smirnova E, McGuffey EJ, Cao Q, Bayatmokhtari E,
Tabacu L, Zipunnikov V, Urbanek
JK, Crainiceanu C: Organizing
and analyzing the activity data in NHANES. Stat Biosci 11(2):262-287, 2019.
Merikangas KR, Swendsen J, Hickie IB,
Cui L, Shou
H, Merikangas AK, Zhang J, Lamers F, Crainiceanu
C, Volkow ND, Zipunnikov V: Real-time mobile monitoring
of the dynamic associations among motor activity, energy, mood, and sleep in
adults with bipolar disorder. JAMA
Psychiatry 76(2):190-198, 2019.
Muschelli J, Gherman A, Fortin
JP, Avants B, Whitcher B, Clayden JD, Caffo BS, Crainiceanu CM: Neuroconductor:
an R platform for medical imaging analysis. Biostatistics 20(2):218-239, 2019.
Nguyen J, Rothman A, Gonzalez N, Avornu A, Ogbuokiri E, Balcer LJ,
Galetta SL, Frohman EM, Frohman T, Crainiceanu
C, Calabresi PA, Saidha S: Macular ganglion cell and
inner plexiform layer thickness is more strongly associated eith
visual function in multiple sclerosis than Bruch membrane opening-minimum rim
width or peripapillary retinal nerve fiber layer thicknesses. J Neuroophthalmol
39(4):444-450, 2019.
Oh J, Ontaneda D, Azevedo C, Klawiter
EC, Absinta M, Arnold DL, Bakshi R, Calabresi PA, Crainiceanu C, ..., Shinohara
RT, et al: Imaging
outcome measures of neuroprotection and repair in MS: A consensus statement
from NAIMS. Neurology
92(11):519-533, 2019.
Rothman A, Murphy OC, Fitzgerald KC,
Button J, Gordon-Lipkin E, Ratchford JN, Newsome SD, Mowry EM, Sotirchos ES, Syc-Mazurek SB,
Nguyen J, Caldito NG, Balcer LJ, Frohman EM, Frohman
TC, Reich DS, Crainiceanu C, Saidha S, Calabresi PA: Retinal measurements
predict 10-year disability in multiple sclerosis. Ann Clin Transl Neurol 6(2):222-232,
2019.
Sotirchos ES, Fitzgerald KC, Crainiceanu CM: Reporting of R2 statistics
for mixed-effects regression models. JAMA
Neurol 76(4):507, 2019.
Frank
Curriero (go
to top of document)
Brooks MM, Salvatore AL, Khanal P, Curriero
FC: Mapping cumulative risk
in Delaware: approach and implications for health equity. J Public
Health Manag Pract 30(3):E112-E123, 2024.
Crane BM, Moored KD, Donahue PT,
Corrigan AE, Curriero FC, Shields TM, Desjardins MR, Richards EA, Rosso
AL, Lovasi GS, Odden MC, Lopez OL, Biggs ML, Newman AB, Andrews RM, Carlson MC:
Associations between
toxicity-weighted concentrations and dementia risk: Results from the
Cardiovascular Health Cognition Study. Sci Total Environ 945:173706,
2024.
Desjardins MR, Davis BJK, Curriero
FC: Evaluating the
performance of Bayesian geostatistical prediction with physical barriers in the
Chesapeake Bay. Environ Monit Assess 196(3):255, 2024.
Desjardins MR, Kanarek NF, Nelson WG,
Bachman J, Curriero FC: Disparities in cancer stage
outcomes by catchment areas for a comprehensive cancer center. JAMA Netw Open 7(5):e249474, 2024.
Greene E, Walcott M, Guerra L, Tieu HV,
Nandi V, Soler J, Diaz J, Curriero F, Latkin
C, Bosompem A, Frye V, NNHIV Study Team: Correlates of concordance
between self-reported and lab-confirmed viral load among Black and Latine men
who have sex with men (BLMSM) living with HIV in New York City. AIDS
Care 36(5):661-671, 2024.
Makhni MC, Curriero FC, Yeung CM,
Leung E, Kvit A, Ahmad CS, Lehman RA Jr: The burden of back and neck
strains and sprains in professional baseball players. Clin Spine Surg 37(7):305-309,
2024.
Siegel SD, Zhang Y, Lynch SM, Rowland
J, Curriero FC: A
novel approach for conducting a catchment area analysis of breast cancer by age
and stage for a community cancer center. Cancer Epidemiol Biomarkers
Prev 33(5):646-653, 2024.
Tao XG, Curriero FC, Mahesh M: Low dose radiation and solid
tumors mortality risk. J Occup Environ Med
66(6):e230-e237, 2024.
Tao XG, Curriero FC, Mahesh M: Low-dose radiation risks of
lymphohematopoietic cancer mortality in U.S. shipyard workers. Radiat Res 201(6):586-603, 2024.
Aune KT, Zaitchik BF, Curriero
FC, Davis MF, Smith GS: Agreement
in extreme precipitation exposure assessment is modified by race and social
vulnerability. Front Epidemiol 3:1128501, 2023.
Coyle CR, Desjardins MR, Curriero
FC, Rudolph J, Astemborski J, Falade-Nwulia O, Kirk
GD, Thomas DL, Mehta SH, Genberg BL: Geographic variation in HCV
treatment penetration among people who inject drugs in Baltimore, MD. J
Viral Hepat 30(10):810-818, 2023.
Desjardins MR, Desravines N, Fader AN,
Wethington SL, Curriero FC: Geographic disparities in
potential accessibility to gynecologic oncologists in the United States from
2001 to 2020. Obstet Gynecol 142(3):688-697, 2023.
Freelander L, Rickless
DS, Anderson C, Curriero F, Rockhill S, Mirsajedin
A, Colon CJ, Lusane J, Vigo-Valentin A, Wong D: The impact of COVID-19 on
healthcare coverage and access in racial and ethnic minority populations in the
United States. Geospat Health 18(2),
2023.
Harfouche MN, Shields T, Curriero FC: Geospatial analysis of firearm
injuries in an urban setting: Individual rather than community characteristics
affect firearm injury risk. Am J Surg 225(6):1062-1068, 2023.
Hauser M, Kabuya JB, Mantus M, Kamavu LK, Sichivula JL, Matende
WM, Fritschi N, Shields T, Curriero F, Kvit A, Chongwe G, Moss WJ, Ritz
N, Ippolito MM: Malaria in
refugee children resettled to a holoendemic area of sub-Saharan Africa. Clin
Infect Dis 76(3):e1104-e1113, 2023.
Makhni MC, Curriero FC, Yeung CM, Kvit
A, Ahmad CS, Lehman RA Jr.: Epidemiology
of lumbar spine conditions in professional baseball players. Clin Spine
Surg 36(7):E283-E287, 2023.
Siegel SD, Brooks MM, Berman JD, Lynch
SM, Sims-Mourtada J, Schug ZT, Curriero FC: Neighborhood factors and
triple negative breast cancer: The role of cumulative exposure to area-level
risk factors. Cancer Med 12(10):11760-11772, 2023.
Brooks MM, Siegel SD, Corrigan AE, Curriero
FC: Aggregated spatial
intensity as a method for estimating point-level exposures within area-level
units: The case of tobacco retailer exposure in census tracts. Spat
Spatiotemporal Epidemiol 41:100482, 2022.
Carr JB 2nd, McElheny KD, Corrigan A,
Rowe D, Ma K, Curriero FC: The most common type,
severity, and expected frequency of injuries vary by defensive position in
professional baseball players. Am J Sports Med 50(9):2534-2541,
2022.
Chalmers PN, Mcelheny K, D'Angelo J,
Rowe D, Ma K, Curriero FC, Kvit A, Erickson BJ: Effect of weather and game
factors on injury rates in professional baseball players. Am J Sports
Med 50(4):1130-1136, 2022.
Francis L, Perrin N, Curriero
FC, Black MM, Allen JK: Food
desert status of family child care homes: relationship
to young children's food quality. Int J Environ Res Public Health
19(11):6393, 2022.
Fries B, Davis BJK, Corrigan AE,
DePaola A, Curriero FC: Nested spatial and temporal
modeling of environmental conditions associated with genetic markers of Vibrio
parahaemolyticus in Washington State Pacific oysters. Front Microbiol 13:849336, 2022.
Haeberle HS, Ramkumar PN, Frantz TL,
Jones GL, Curriero FC, Corrigan A, Soloff L, Schickendantz
MS, Frangiamore SJ: Pectoralis muscle injuries in
major and minor league baseball. J Shoulder Elbow Surg
31(8):e363-e368, 2022.
Kvik A, Rose J, Curriero FC, Crifasi
CK, Pollack CE: The
association between vacant housing demolition and safety and health in
Baltimore, MD. Prev Med 164:107292, 2022.
Makhni MC, Curriero FC, Yeung CM,
Leung E, Kvit A, Mroz T, Ahmad CS, Lehman RA Jr: Epidemiology of spine-related
neurologic injuries in professional baseball players. Spine
47(6):E265-E271, 2022.
Shannon KL, Shields T, Ahmed S, Rahman
H, Prue CS, Khyang J, Ram M, Haq MZ, Akter J, Alam
MS, Glass GE, Nyunt MM, Sack DA, Sullivan DJ, Khan WA, Curriero FC: Temporal and spatial
differences between symptomatic and asymptomatic malaria infections in the
Chittagong Hill Districts, Bangladesh. Am J Trop Med Hyg
107(6):1210-1217, 2022.
Siegel SD, Brooks M, Bourke J, Curriero
FC: Reducing exposure to
tobacco retailers with residential zoning policy: insights from a geospatial
analysis of Wilmington, Delaware. Cities Health 6(4):752-764, 2022.
Siegel SD, Brooks MM, Lynch SM, Sims-Mourtada J, Schug ZT, Curriero FC: Racial disparities in triple
negative breast cancer: toward a causal architecture approach. Breast
Cancer Res 24(1):37, 2022.
Siegel SD, Brooks MM, Sims-Mourtada J, Schug ZT, Leonard DJ, Petrelli N, Curriero
FC: A population health
assessment in a community cancer center catchment area: triple-negative breast
cancer, alcohol use, and obesity in New Castle County, Delaware. Cancer
Epidemiol Biomarkers Prev 31(1):108-116, 2022.
Tao XG, Curriero FC, Chee EM,
Mahesh M: Updated
standardized mortality ratio evaluation of disease risks of shipyard workers
exposed to low dose ionizing radiation. J Occup
Environ Med 64(4):e224-e230, 2022.
Brooks MM, Siegel SD, Curriero
FC: Characterizing the
spatial relationship between smoking status and tobacco retail exposure:
implications for policy development and evaluation. Health Place
68:102530, 2021.
Conway JJ, Curriero FC, Camp CL,
Toresdahl BG, Coleman S, Kinderknecht JJ: Time out of play due to
illness in major and minor league baseball. Clin J Sport Med
31(3):e137-e143, 2021.
Curriero FC, Wychgram
C, Rebman AW, Corrigan AE, Kvit A, Shields T, Aucott
JN: The Lyme and Tickborne
Disease Dashboard: A map-based resource to promote public health awareness and
research collaboration. PLoS One
16(12):e0260122, 2021.
Davis BJK, Corrigan AE, Sun Z, Atherly
E, DePaola A, Curriero FC: A case-control analysis of
traceback investigations for Vibrio parahaemolyticus infections (vibriosis) and
pre-harvest environmental conditions in Washington State, 2013-2018. Sci
Total Environ 752:141650, 2021.
Fakunle DO, Curriero FC, Leaf PJ,
Furr-Holden DM, Thorpe RJ: Black,
white, or green? The effects of racial composition and socioeconomic status on
neighborhood-level tobacco outlet density. Ethn
Health 26(7):1012-1027, 2021.
Fletcher KM, Espey J, Grossman MK,
Sharpe JD, Curriero FC, Wilt GE, Sunshine G, Moreland A, Howard-Williams
M, Ramos JG, Giuffrida D, Garcia MC, Hartnett WM, Foster S: Social vulnerability and
county stay-at-home behavior during COVID-19 stay-at-home orders, United
States, April 7-April 20, 2020. Ann Epidemiol 64:76-82, 2021.
Frantz T, Ramkumar PN, Frangiamore S, Jones G, Soloff L, Kvit A, Curriero
FC, Schickendantz M: Epidemiology
of acromioclavicular joint injuries in professional baseball: analysis from the
Major League Baseball Health and Injury Tracking System. J Shoulder
Elbow Surg 30(1):127-133, 2021.
Green G, Pollack Porter KM, Kvit A,
Conte S, D'Angelo J, Valadka A, Curriero FC: Examining batting performance
after a sports-related concussion among Major League Baseball position players.
Am J Sports Med 49(3):790-797, 2021.
Green GA, Porter KP, Conte S, Valadka AB, Soloff L, Curriero FC: Preventing concussions from
foul tips and backswings in professional baseball: catchers' perceptions of and
experiences with conventional and hockey-style masks. Clin J Sport Med
31(1):e1-e7, 2021.
Guemes A, Ray S, Aboumerhi
K, Desjardins MR, Kvit A, Corrigan AE, Fries B, Shields T, Stevens RD, Curriero
FC, Etienne-Cummings R: A
syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms
in the United States. Sci Rep 11(1):4660, 2021.
Siegel SD, Brooks M, Curriero
FC: Operationalizing the
population health framework: clinical characteristics, social context, and the
built environment. Popul Health Manag
24(4):454-462, 2021.
Siegel SD, Brooks M, Ragozine-Bush HE, Schnoll RA, Curriero FC: The co-occurrence of smoking
and alcohol use disorder in a hospital-based population: Applying a
multimorbidity framework using geographic information system methods. Addict
Behav 118:106883, 2021.
Bhondoekhan FRP, Searle KM, Hamapumbu
H, Lubinda M, Matoba J, Musonda M, Katowa B, Shields TM, Kobayashi T, Norris
DE, Curriero FC, Stevenson JC, Thuma PE, Moss WJ, Southern and Central
Africa International Centers of Excellence for Malaria Research: Improving the efficiency of
reactive case detection for malaria elimination in southern Zambia: a
cross-sectional study. Malar J 19(1):175, 2020.
Hultman K, Szukics PF, Grzenda A, Curriero
FC, Cohen SB: Gastrocnemius
injuries in professional baseball players: an epidemiological study. Am
J Sports Med 48(10):2489-2498, 2020.
Johnson KA, Jones-Smith J, Curriero
FC, Cheskin LJ, Benjamin-Neelon SE, Perin J, Caicedo MR, Thornton RLJ: Low-income black and Hispanic
children's neighborhood food environments and weight trajectories in early
childhood. Acad Pediatr
20(6):784-792, 2020.
Rubenstein WJ, Allahabadi
S, Curriero F, Feeley BT, Lansdown DA: Fracture epidemiology in
professional baseball from 2011 to 2017. Orthop
J Sports Med 8(8):2325967120943161, 2020.
Spaur M, Davis BJK, Kivitz
S, DePaola A, Bowers JC, Curriero FC, Nachman KE: A systematic review of
post-harvest interventions for Vibrio parahaemolyticus in raw oysters. Sci
Total Environ 745:140795, 2020.
Stojan G, Kvit A, Curriero FC,
Petri M: A spatiotemporal
analysis of organ-specific lupus flares in relation to atmospheric variables
and fine particulate matter pollution. Arthritis Rheumatol
72(7):1134-1142, 2020.
Tieu HV, Koblin
BA, Latkin C, Curriero FC, Greene ER, Rundle
A, Frye V: Neighborhood and
network characteristics and the HIV care continuum among gay, bisexual, and
other men who have sex with men. J Urban Health 97(5):592-608, 2020.
Berman JD, Jin L, Bell ML, Curriero FC: Developing a geostatistical
simulation method to inform the quantity and placement of new monitors for a
follow-up air sampling campaign. J
Expo Sci Environ Epidemiol 29(2):248-257, 2019.
Davis BJK, Curriero FC: Development
and evaluation of geostatistical methods for non-Euclidean-based spatial
covariance matrices. Math Geosci 51(6):767-791, 2019.
Davis BJK, Jacobs JM, Zaitchik B,
DePaola A, Curriero FC: Vibrio parahaemolyticus in
the Chesapeake Bay: Operational in situ prediction and forecast models can
benefit from inclusion of lagged water quality measurements. Appl Environ Microbiol
85(17):e01007-19, 2019.
DePriest K, Butz A, Curriero FC, Perrin N, Gross D: Associations among
neighborhood greenspace, neighborhood violence, and children's asthma control
in an urban city. Ann Allergy Asthma
Immunol 123(6):608-610, 2019.
DePriest KN, Shields TM, Curriero FC: Returning to our roots: the
use of geospatial data for nurse-led community research. Res Nurs Health
42(6):467-475, 2019.
Esquivel A, Freehill MT, Curriero FC, Rand KL, Conte S, Tedeschi
T, Lemos SE: Analysis of
non-game injuries in major league baseball. Orthop J Sports Med 7(12):2325967119888499, 2019.
Fakunle DO, Thorpe RJ Jr, Furr-Holden CDM, Curriero FC, Leaf PJ: Does tobacco outlet
inequality extend to high-white mid-Atlantic jurisdictions? A study of
socioeconomic status and density. J
Racial Ethn Health Disparities 6(2):409-418,
2019.
Feingold BJ, Augustino KL, Curriero FC, Udani PC, Ramsey KM: Evaluation of
methicillin-resistant Staphylococcus
aureus carriage and high livestock production areas in North Carolina
through active case finding at a tertiary care hospital. Int J Environ Res Public Health
16(18):E3418, 2019.
Flynn A, Davis BJK, Atherly E, Olson G,
Bowers JC, DePaola A, Curriero FC: Associations of
environmental conditions and Vibrio parahaemolyticus genetic markers in
Washington State Pacific oysters. Front Microbiol
10:2797, 2019.
Hansel NN, Romero KM, Pollard SL, Bose
S, Psoter
KJ, J Underhill L, Johnson C, Williams D, Curriero
FC, Breysse P, Koehler K, Checkley
W, GASP Study Investigators: Ambient
air pollution and variation in multiple domains of asthma morbidity among
Peruvian children. Ann Am Thorac Soc 16(3):348-355, 2019.
Jarman MP, Pollack Porter K, Curriero FC, Castillo RC: Factors mediating
demographic determinants of injury mortality. Ann Epidemiol 34:58-64, 2019.
Klassen AC, Hsieh S, Pankiewicz A, Kabbe A, Hayes J, Curriero
F: The association of
neighborhood-level social class and tobacco consumption with adverse lung
cancer characteristics in Maryland. Tob
Induc Dis 17:06, 2019.
Kvit A, Davis B, Jacobs J, Curriero FC: Adjusted, non-Euclidean
cluster detection of Vibrio parahaemolyticus in the Chesapeake Bay, USA. Geospat Health 14(2):10.4081, 2019.
Majd E, McCormack M, Davis M, Curriero F, Berman J, Connolly F, Leaf
P, Rule A, Green T, Clemons-Erby D, Gummerson C, Koehler K: Indoor air quality in
inner-city schools and its associations with building characteristics and
environmental factors. Environ Res
170:83-91, 2019.
Nesoff ED, Milam AJ, Pollack KM, Curriero
FC, Bowie JV, Knowlton AR, Gielen AC, Furr-Holden DM: Neighbourhood
alcohol environment and injury risk: a spatial analysis of pedestrian injury in
Baltimore City. Inj Prev
25(5):350-356, 2019.
Sapkota A, Murtugudde R, Curriero FC, Upperman CR, Ziska L,
Jiang C: Associations
between alteration in plant phenology and hay fever prevalence among US adults:
Implication for changing climate. PLoS One
14(3):e0212010, 2019.
Trangenstein PJ, Curriero FC, Jennings JM, Webster D, Latkin
C, Eck RH, Jernigan DH: Methods
for evaluating the association between alcohol outlet density and violent crime.
Alcohol Clin Exp Res 43(8):1714-1726,
2019.
Abhirup
Datta (go
to top of document)
Gilbert
B, Datta A: Visibility
graph-based covariance functions for scalable spatial analysis in non-convex
partially Euclidean domains. Biometrics 80(3):ujae089, 2024.
Rosenblum M, Chin ET, Ogburn EL, Nishimura A,
Westreich D, Datta A, et al: Misuse of
statistical method results in highly biased interpretation of forensic evidence
in Guyll et al. Law Prob Risk 23(1):mgad010, 2024.
Rosenblum M, Chin ET, Ogburn EL, Nishimura A,
Westreich D, Datta A, et al: Incorrect statistical
reasoning in Guyll et al leads to biased claims about strength of forensic
evidence. Proc Natl Acad Sci USA
121(45):e2315431121, 2024.
Tang
B, Pramanik
S, Zhao
Y, Caffo B, Datta A: Direct
Bayesian linear regression for distribution-valued covariates. Electron
J Stat 18(2): 3327-3375, 2024.
Wang
G, Datta A, Lindquist MA: Improved fMRI-based pain
prediction using Bayesian group-wise functional registration. Biostatistics
25(3):885-903, 2024.
Dey
D, Datta A, Banerjee S: Modeling multivariate spatial
dependencies using graphical models. N Engl J Stat Data Sci
1(2):283-295, 2023.
Fiksel
J, Gilbert
B, Wilson E, Kalter H, Kante A, Akum A, Blau D,
Bassat Q, Macicame I, Samo Gudo E, Black R, Zeger S, Amouzou
A, Datta A: Correcting
for verbal autopsy misclassification bias in cause-specific mortality estimates.
Am J Trop Med Hyg 108(5_Suppl):66-77, 2023.
Gilbert
B, Fiksel
J, Wilson E, Kalter H, Kante A, Akum A, Blau D, Bassat Q, Macicame
I, Samo Gudo E, Black R, Zeger S, Amouzou
A, Datta A: Multi-cause
calibration of verbal autopsy-based cause-specific mortality estimates of
children and neonates in Mozambique. Am J Trop Med Hyg
108(5_Suppl):78-89, 2023.
Heffernan
C, Peng R, Gentner DR, Koehler K, Datta A: A
dynamic spatial filtering approach to mitigate underestimation bias in field
calibrated low-cost sensor air pollution data. Ann Appl Stat 17(4):
3056-3087, 2023.
Koehler K, Wilks M, Green T, Rule AM,
Zamora ML, Buehler C, Datta A, Gentner DR, Putcha N, Hansel NN, Kirk GD,
Raju S, McCormack M: Evaluation
of calibration approaches for indoor deployments of PurpleAir
monitors. Atmos Environ 310:119944, 2023.
Lin JJY, Buehler C, Datta A,
Gentner DR, Koehler K, Zamora ML: Laboratory and field
evaluation of a low-cost methane sensor and key environmental factors for
sensor calibration. Environ Sci Atmos 3(4):683-694, 2023.
Macicame I, Kante AM, Wilson E, Gilbert
B, Koffi A, Nhachungue S, Monjane C, Duce P, Adriano A, Chicumbe
S, Jani I, Kalter HD, Datta A, Zeger S, Black RE, Gudo ES, Amouzou
A, COMSA-Mozambique Study Team: Countrywide mortality
surveillance for action in Mozambique: results from a national sample-based
vital statistics system for mortality and cause of death. Am J Trop Med Hyg 108(5_Suppl):5-16, 2023.
Saha
A, Basu S, Datta A: Random
forests for spatially dependent data. JASA 118(541):665-683, 2023.
Weber
LM, Saha
A, Datta A, Hansen KD, Hicks SC: nnSVG
for the scalable identification of spatially variable genes using
nearest-neighbor Gaussian processes. Nat Commun
14(1):4059, 2023.
Wikle CK, Datta A, Vyasa Hari B,
Boone EL, Sahoo I, Kavila I, Castruccio S, Simmons
SJ, Burr WS, Chang W: An illustration of
model agnostic explainability methods applied to environmental data. Environmetrics 34(1):e2772, 2023.
Zamora ML, Buehler C, Datta A,
Gentner DR, Koehler K: Identifying
optimal co-location calibration periods for low-cost sensors. Atmos Meas
Tech 16(1):169-179, 2023.
Datta A: Nearest-neighbor
sparse Cholesky matrices in spatial statistics. WIREs Comp Stat
14(5):e1574, 2022.
Dey
D, Datta A, Banerjee S: Graphical
Gaussian process models for highly multivariate spatial data. Biometrika 109(4):993-1014, 2022.
Fiksel
J, Datta A, Amouzou
A, Zeger S: Generalized
Bayes quantification learning under dataset shift. JASA
117(540):2163-2181, 2022.
Fiksel
J, Zeger S, Datta A: A
transformation-free linear regression for compositional outcomes and predictors.
Biometrics 78(3):974-987, 2022.
Finley AO, Datta A, Banerjee S: spNNGP
R package for nearest neighbor Gaussian process models. J Stat Softw 103(5):1-40, 2022.
Gao L, Datta A, Banerjee S: Hierarchical multivariate
directed acyclic graph autoregressive models for spatial diseases mapping. Stat
Med 41(16):3057-3075, 2022.
Patton A, Datta A, Zamora ML,
Buehler C, Xiong F, Gentner DR, Koehler K: Non-linear probabilistic
calibration of low-cost environmental air pollution sensor networks for
neighborhood level spatiotemporal exposure assessment. J Expo Sci
Environ Epidemiol 32(6):908-916, 2022.
Saha
A, Datta A, Banerjee S: Scalable
predictions for spatial probit linear mixed models using nearest neighbor
Gaussian processes. J Data Sci 20(4): 533-544, 2022.
Seal S, Datta A, Basu S: Efficient estimation of SNP
heritability using Gaussian predictive process in large scale cohort studies.
PLoS Genet 8(4):e1010151, 2022.
Wang
G, Datta A, Lindquist MA: Bayesian
functional registration of fMRI activation maps. Ann Appl Stat 16
(3), 1676-1699, 2022.
Zamora ML, Buehler C, Lei H, Datta
A, Xiong F, Gentner DR, Koehler K: Evaluating the performance of
using low-cost sensors to calibrate for cross-sensitivities in a multipollutant
network. ACS ES&T Engineering 2(5):780-793, 2022.
Datta A, Fiksel
J, Amouzou
A, Zeger SL: Regularized
Bayesian transfer learning for population-level etiological distributions. Biostatistics
22(4):836-857, 2021.
Datta A, Pita
A, Rao A, Sithole B, Mnisi Z, Baral S: Size estimation of key
populations in the HIV epidemic in eSwatini using incomplete and misaligned
capture-recapture data. Ann Appl Stat 14(3):1207-1241, 2020.
Datta A, Saha
A, Zamora ML, Buehler C, Hao L, Xiong F, Gentner DR, Koehler K: Statistical field calibration
of a low-cost PM 2.5 monitoring network in Baltimore. Atmos Environ
242:117761, 2020.
Datta A, Banerjee S, Hodges JS, Gao L: Spatial disease mapping
using Directed Acyclic Graph Auto-Regressive (DAGAR) models. Bayesian
Anal 14(4):1221-1244, 2019.
Datta A, Lin
W, Rao A, Diouf D, Kouame A, Edwards JK, Bao L, Louis TA, Baral S: Bayesian estimation of MSM
population size in Cote d'Ivoire. Stat
Public Policy 6(1):1-13, 2019.
Datta A, Zou H, Banerjee S: Bayesian high-dimensional regression for
change point analysis. Statistics
and Its Interface 12(2):253-264, 2019.
Finley AO, Datta A, Cook BD, Morton DC, Andersen HE, Banerjee S: Efficient algorithms for Bayesian nearest neighbor Gaussian processes. J Comp Graph Stat 28(2):401-414, 2019.
Heaton MJ, Datta A, Finley AO, Furrer R, Guinness J, Guhaniyogi
R, Gerber F, Gramacy RB, Hammerling D, Katzfuss M,
Lindgren F, Nychka DW, Sun F, Zammit-Mangion: A case study competition
among methods for analyzing large spatial data. J Agric Biol Environ Stat 24(3):398-425, 2019.
Marie
Diener-West (go
to top of document)
Donahue SP, Chandler DL, Wu R, Marsh
JD, Law C, Areaux RG Jr, Ghasia
FF, Li Z, Kraker RT, Cotter SA, Holmes JM, Pediatric Eye Disease Investigator
Group (includes Diener-West M): Eight-year outcomes of
bilateral lateral rectus recessions versus unilateral recession-resection in
childhood basic-type intermittent exotropia. Ophthalmology
131(1):98-106, 2024.
Wang S, Repka MX, Sutherland DR, Hatt
SR, Traboulsi EI, Lambert SR, Melia
BM, Kraker RT, Holmes JM, Cotter SA, Pediatric Eye Disease Investigator Group
(includes Diener-West M): Complications, visual acuity,
and refractive error 3 years after secondary intraocular lens implantation for
pediatric aphakia. Ophthalmology 131(10):1196-1206, 2024.
Writing Committee for the Pediatric Eye
Disease Investigator Group, Pediatric Eye Disease Investigator Group (includes Diener-West
M), Chen AM, Erzurum SA, et al: Refractive error change and overminus lens therapy for childhood intermittent exotropia.
JAMA Ophthalmol 142(5):417-428, 2024.
Bothun ED, Repka MX, Kraker RT, Wu R,
Leske DA, Hatt SR, Li Z, Freedman SF, Astle WF, Cotter SA, Holmes JM, Pediatric
Eye Disease Investigator Group (includes Diener-West M): Incidence of glaucoma-related
adverse events in the first 5 years after pediatric lensectomy. JAMA
Ophthalmol 141(4):324-331, 2023.
Jenewein EC, Cotter S, Roberts T, Kulp
M, Mitchell GL, Jones-Jordan LA, Chen AM, Hopkins K, Huang K, Amster D, Fecho
G, Tyler J, Meiyeppen S, Scheiman M, Convergence
Insufficiency Treatment Trial-Attention and Reading Trial (CITT-ART)
Investigator Group (includes Diener-West M): Vergence/accommodative therapy
for symptomatic convergence insufficiency in children: time course of
improvements in convergence function. Ophthalmic Physiol
Opt 43(1):105-115, 2023.
Ng JH, Yang W, Dember LM, HFM Study
Group (includes Diener-West M): Performance characteristics of
candidate criteria for hemodialysis arteriovenous fistula maturation. Clin
J Am Soc Nephrol 18(10):1321-1332, 2023.
Periyakoil D, Periyakoil
P, Tee CA, Spanos CJ, Diener-West M, Tee M, Prata N: Are there differences between
the stress responses of Philippine men and women to the COVID-19 pandemic? Int
J Environ Res Public Health 20(3):2326, 2023.
Repka MX, Weise KK, Chandler DL, Wu R, Melia BM,
Manny RE, Kehler LAF, Jordan CO, Raghuram A, Summers AI, Lee KA, Petersen DB,
Erzurum SA, Pang Y, Lenhart PD, Ticho BH, Beck RW, Kraker RT, Holmes JM, Cotter
SA, Pediatric Eye Disease Investigator Group (includes Diener-West M): Low-dose 0.01% atropine eye
drops vs placebo for myopia control: a randomized clinical trial. JAMA
Ophthalmol 141(8):756-765, 2023.
Yen KG, Repka MX, Sutherland DR, Haider
KM, Hatt SR, Kraker RT, Galvin JA, Li Z, Cotter SA, Holmes JM, Pediatric Eye
Disease Investigator Group (includes Diener-West M): Complications occurring
through 5 years following primary intraocular lens implantation for pediatric
cataract. JAMA Ophthalmol 141(8):705-714, 2023.
Coffman VR, Hall DJ, Pisanic N, Wiesner-Friedman C, Rogers S, Rule A, McCormack
M, Diener-West M, Davis MF, Heaney CD: Assessing residential exposure
to microbes from industrial hog operations in rural North Carolina: methods and
lessons learned. Prog Community Health Partnersh
16(1):61-72, 2022.
Freedman SF, Hercinovic
A, Wallace DK, Kraker RT, Li Z, Bhatt AR, Boente CS, Crouch ER, Hubbard GB,
Rogers DL, VanderVeen D, Yang MB, Cheung NL, Cotter SA, Holmes JM, Pediatric
Eye Disease Investigator Group (includes Diener-West M): Low- and very low-dose
bevacizumab for retinopathy of prematurity: reactivations, additional
treatments, and 12-month outcomes. Ophthalmology 129(10):1120-1128,
2022.
Kulp MT, Sinnott LT, Cotter SA, Borsting E, Toole AJ, Chen AM, Jenewein EC, Morrison AM, Plaumann MD, Jones-Jordan L, Mitchell GL, Tea YC, Scheiman
MM, Convergence Insufficiency Treatment Trial (CITT) Investigator Group,
Convergence Insufficiency Treatment Trial - Attention, Reading Trial (CITT-ART)
Investigator Group (includes Diener-West M): Does coexisting accommodative
dysfunction impact clinical convergence measures, symptoms and treatment
success for symptomatic convergence insufficiency in children? Ophthalmic
Physiol Opt
42(1):59-70, 2022.
Li Y, He Y, Falzon I, Fairbourn B,
Tingey S, Imrey PB, Radeva MK, Beck GJ, Gassman JJ,
Roy-Chaudhury P, Berceli SA, Cheung AK, Shiu YT, Hemodialysis Fistula
Maturation Study (includes Diener-West M): Dynamic remodeling of human
arteriovenous fistula wall obtained from magnetic resonance imaging during the
first 6 months after creation. Kidney Int Rep 7(8):1905-1909, 2022.
Pineles SL, Henderson RJ, Repka MX, ...,
Pediatric Eye Disease Investigator Group (includes Diener-West M): The Pediatric Optic Neuritis
Prospective Outcomes Study: Two-year results. Ophthalmology
129(8):856-864, 2022.
Repka MX, Dean TW, Kraker RT, ...,
Pediatric Eye Disease Investigator Group (includes Diener-West M): Visual acuity and ophthalmic
outcomes 5 years after cataract surgery among children younger than 13 years.
JAMA Ophthalmol 140(3):269-276, 2022.
Zia N, Bachani
AM, Kajungu D, Galiwango E, Loeb M, Diener-West
M, Wegener S, Pariyo G, Hyder AA: Understanding child
disability: Factors associated with child disability at the Iganga-Mayuge Health and Demographic Surveillance Site in Uganda.
PLoS One 17(4):e0267182, 2022.
Chen AM, Roberts TL, Cotter SA, Kulp
MT, Sinnott LT, Borsting EJ, Tea YC, Jones-Jordan LA,
Hertle R, Mitchell GL, Eugene Arnold L, Chase C, Scheiman MM, Convergence
Insufficiency Treatment Trial - Attention and Reading Trial (CITT-ART)
Investigator Group (includes Diener-West M): Effectiveness of
vergence/accommodative therapy for accommodative dysfunction in children with
convergence insufficiency. Ophthalmic Physiol Opt 41(1):21-32, 2021.
Coffman VR, Hall DJ, Pisanic N, Love DC, Nadimpalli M, McCormack M, Diener-West
M, Davis MF, Heaney CD: Self-reported
work activities, eye, nose, and throat symptoms, and respiratory health
outcomes among an industrial hog operation worker cohort, North Carolina, USA.
Am J Ind Med 64(5):403-413, 2021.
Coffman VR, Hall DJ, Pisanic N, Nadimpalli M, McCormack M, Diener-West M,
Davis MF, Heaney CD: Personal
protective equipment use during industrial hog operation work activities and
acute lung function changes in a prospective worker cohort, North Carolina
2014-2015. Am J Ind Med 64(8):688-698, 2021.
Kraker RT, Wallace DK, Beck RW,
Saunders CT, Lorenzi E, Melia BM, Li Z, Pediatric Eye Disease Investigator
Group (includes Diener-West M): Choice of dose level for a
randomized clinical trial of low-dose bevacizumab vs laser for type 1
retinopathy of prematurity. JAMA Ophthalmol 139(10):1143-1144, 2021.
Oh J, Chen M, Cybulsky
K, Suthiphosuwan S, Seyman
E, Dewey B, Diener-West M, van Zijl P, Prince J, Reich DS, Calabresi PA:
Five-year longitudinal
changes in quantitative spinal cord MRI in multiple sclerosis. Mult
Scler 27(4):549-558, 2021.
Writing Committee for the Pediatric Eye
Disease Investigator Group (PEDIG) (includes Diener-West M), Bothun ED,
Repka MX, Dean TW, Gray ME, Lenhart PD, Li Z, Morrison DG, Wallace DK, Kraker
RT, Cotter SA, Holmes JM: Visual
outcomes and complications after lensectomy for traumatic cataract in children.
JAMA Ophthalmol 139(6):647-653, 2021.
Zia N, Bachani
AM, Kajungu D, Galiwango E, Loeb M, Diener-West
M, Wegener S, Pariyo G, Hyder AA: Measuring child functioning:
Assessing correlation and agreement between caregiver and child responses at
the Iganga-Mayuge health and demographic surveillance
site in Uganda. Disabil Health J
14(2):101022, 2021.
McAdams-DeMarco MA, Chu NM, Steckel M,
Kunwar S, Gonzalez Fernandez M, Carlson MC, Fine DM, Appel LJ, Diener-West
M, Segev
DL: Interventions Made to
Preserve Cognitive Function Trial (IMPCT) study protocol: a multi-dialysis
center 2x2 factorial randomized controlled trial of intradialytic cognitive and
exercise training to preserve cognitive function. BMC Nephrol
21(1):383, 2020.
Zia N, Loeb M, Kajungu
D, Galiwango E, Diener-West M, Wegener S, Pariyo G, Hyder AA, Bachani AM: Adaptation and validation of
UNICEF/Washington group child functioning module at the Iganga-Mayuge health and demographic surveillance site in Uganda.
BMC Public Health 20(1):1334, 2020.
Dezube R, Jennings MT, Rykiel M, Diener-West M, Boyle MP, Chmiel JF, Dasenbrook EC: Eradication of persistent
methicillin-resistant Staphylococcus aureus infection in cystic fibrosis. J Cyst Fibros
18(3):357-363, 2019.
Kubiak RW, Zelnick LR, Hoofnagle AN,
Alpers CE, Terry CM, Shiu YT, Cheung AK, de Boer IH, Robinson-Cohen C, Allon M,
Dember LM, Feldman HI, Himmelfarb J, Huber TS, Roy-Chaudhury P, Vazquez MA,
Kusek JW, Beck GJ, Imrey PB, Kestenbaum B, Hemodialysis Fistula Maturation
Study Group (includes Diener-West
M): Mineral metabolism
disturbances and arteriovenous fistula maturation. Eur J Vasc Endovasc
Surg 57(5):719-728, 2019.
Nelson CS, Vera Cruz D, Su M, Xie G,
Vandergrift N, Pass RF, Forman M, Diener-West
M, Koelle K, Arav-Boger R, Permar SR: Intrahost
dynamics of human cytomegalovirus variants acquired by seronegative
glycoprotein B vaccinees. J Virol
93(5):e01695-18, 2019.
Resnick BA, Morlock L, Diener-West M, Stuart EA, Spencer M,
Sharfstein JM: PH WINS
and the future of public health education. J Public Health Manag Pract 25(Suppl 2):S10-S12, 2019.
Varadaraj V, Ranjit A, Nwadiuko J, Canner J, Diener-West
M, Schneider EB, Thyagarajan SP, Shrestha R, Nagarajan N: Towards diaspora-driven
research capacity strengthening in low- and middle-income countries: results
from India and Nepal. Int Health
11(3):221-228, 2019.
Lacey Etzkorn (go
to top of document)
Davoudi A, Urbanek JK, Etzkorn L, Parikh R, Soliman EZ, Wanigatunga AA, Gabriel
KP, Coresh
J, Schrack JA, Chen LY: Validation
of a Zio XT Patch accelerometer for the objective assessment of physical
activity in the Atherosclerosis Risk in Communities (ARIC) Study. Sensors
24(3):761, 2024.
Etzkorn LH, Heravi AS, Knuth ND, Wu KC, Post
WS, Urbanek JK, Crainiceanu CM: Classification
of free-living body posture with ECG patch accelerometers: application to the
Multicenter AIDS Cohort Study. Stat Biosci
16:25-44, 2024.
Etzkorn LH, Le
Coent Q, van den Boogaard M, Rondeau V, Colantuoni E: A joint frailty model for
recurrent and competing terminal events: application to delirium in the ICU.
Stat Med 43(12):2389-2402, 2024.
Marino FR, Wu HT, Etzkorn L,
Rooney MR, Soliman EZ, Deal JA, Crainiceanu C, Spira AP, Wanigatunga AA,
Schrack JA, Chen LY: Associations
of physical activity and heart rate variability from a two-week ECG monitor
with cognitive function and dementia: The ARIC Neurocognitive Study. Sensors
24(13):4060, 2024.
Dougherty RJ, Liu
F, Etzkorn L, Wanigatunga AA, Walter PJ, Knuth ND, Schrack JA, Ferrucci
L: Validation of
accelerometer placement to capture energy expenditure using doubly labeled
water. Appl Physiol Nutr
Metab 47(10):1045-1049, 2022.
Etzkorn LH, Liu F, Urbanek JK, Heravi AS, Magnani JW, Plankey MW, Margolich JB, Witt MD, Palella FJ Jr, Haberlen SA, Wu KC, Post WS, Schrack JA, Crainiceanu CM: Patterns of objectively measured physical activity differ
between men living with and without HIV. AIDS 36(11):1553-1562, 2022.
Wesner E, Etzkorn L, Bakre S, Chen J, Davis A, Zhang
Y, Yasar S, Rao A, Luciano M, Wang J, Moghekar A: The clinical utility of the MOCA in iNPH assessment. Front Neurol 13:887669, 2022.
Heravi AS, Etzkorn LH, Urbanek JK, Crainiceanu CM, Punjabi NM, Ashikaga H, Brown TT, Budoff MJ,
D'Souza G, Magnani JW, Palella FJ Jr, Berger RD, Wu KC, Post WS: HIV infection is associated with variability in
ventricular repolarization: the Multicenter AIDS Cohort Study (MACS). Circulation 141(3):176-187, 2020.
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Chen JS, Hutton HE, Tran HV, Quang VN, Nguyen MX, Sripaipan T, Dowdy DW, Latkin CA,
Chander G, Frangakis C, Go VF: Efficacy of two evidence-based
alcohol consumption interventions on positive, negative, and neutral days among
hazardous alcohol users living with HIV in Vietnam. AIDS Behav 28(2):421-428, 2024.
Chen JS, Chander G, Tran HV, Sripaipan
T, Hoa NTK, Miller WC, Latkin CA, Dowdy DW, Hutton
HE, Frangakis C, Go VF: Phosphatidylethanol
and self-reported alcohol consumption among people living with HIV in Thai
Nguyen, Vietnam. Alcohol 47(6):1100-1108, 2023.
Nguyen MX, Reyes HL, Pence BW, Muessig KE, Hutton
H, Latkin CA, Dowdy D, Chander G, Lancaster KE, Frangakis C, Sripaipan T,
Tran HV, Go VF: Alcohol use
as a mediator of the effect of two alcohol reduction interventions on mental
health symptoms of ART clients in Vietnam. AIDS Care
35(11):1691-1699, 2023.
Nguyen MX, Zimmer C, Latkin
CA, Lancaster KE, Dowdy DW, Hutton H, Chander G, Frangakis
C, Gaynes BN, Sripaipan T, Tran HV, Go VF: Validation of the combined
Patient Health Questionnaire Anxiety and Depression Scale among people with HIV
in Vietnam. Int J STD AIDS 34(12):832-840, 2023.
Smith MK, Latkin CA,
Hutton HE, Chander G, Enns EA, Ha TV, Frangakis
C, Sripaipan T, Go VF: Longitudinal trajectories of
alcohol use in Vietnamese adults with hazardous alcohol use and HIV. AIDS
Behav 27(6):1972-1980, 2023.
Tao Y, Afthinos A,
Gallegos J, Herrmann O, Frangakis C, Tsapkini
K: Transcranial direct
current stimulation to the left angular gyrus improves verbal learning in
amnestic mild cognitive impairment: a case report. Brain Stimul 16(5):1458-1460, 2023.
Wang Z,
Ficek BN, Webster KT, Herrmann O, Frangakis
CE, Desmond JE, Onyike CU, Caffo B, Hillis AE,
Tsapkini K: Specificity in
generalization effects of transcranial direct current stimulation over the left
inferior frontal gyrus in primary progressive aphasia. Neuromodulation
26(4):850-860, 2023.
Alexandris AS, Wang Y, Frangakis
CE, Lee Y, Ryu J, Alam Z, Koliatsos VE: Long-term changes in axon
calibers after injury: observations on the mouse corticospinal tract. Int
J Mol Sci 23(13):7391, 2022.
Frangakis C, Kohler B, Georgiades CS: CT-guided celiac ganglion
block for neurogenic gastrointestinal dysmotility. J Vasc
Interv Radiol
33(12):1492-1499, 2022.
Herrmann O, Ficek B, Webster KT, Frangakis C, Spira AP, Tsapkini K: Sleep as a predictor of tDCS and language therapy outcomes. Sleep
45(3):zsab275, 2022.
Nguyen MX, Hershow RB,
Blackburn NA, Bui QX, Latkin CA, Hutton H, Chander G,
Dowdy D, Lancaster KE, Frangakis C, Sripaipan T, Tran HV, Go VF: "I refused to drink but
they still forced me": A mixed-methods approach to understanding the
pathways to reduce alcohol use among Vietnamese people with HIV. Soc Sci
Med 301:114902, 2022.
Nguyen MX, Reyes HL, Pence BW, Muessig KE, Hutton
HE, Latkin CA, Dowdy D, Chander G, Lancaster KE, Frangakis C, Sripaipan T,
Tran HV, Go VF: Effects of
two alcohol reduction interventions on depression and anxiety symptoms of ART
clients in Vietnam. AIDS Behav
26(6):1829-1840, 2022.
Blackburn NA, Go VF, Bui Q, Hutton H, Tampi RP, Sripaipan T, Ha TV, Latkin CA, Golden S, Golin C, Chander G, Frangakis C, Gottfredson N, Dowdy DW: The cost-effectiveness of
adapting and implementing a brief intervention to target frequent alcohol use
among persons with HIV in Vietnam. AIDS Behav
25(7):2108-2119, 2021.
Frangakis C, Sohn JH, Bas A, Chapiro J, Schernthaner
RE, Lin M, Hamilton JP, Pawlik TM, Hong K, Duran R: Longitudinal analysis of the
effect of repeated transarterial chemoembolization
for liver cancer on portal venous pressure. Front Oncol 11:639235,
2021.
Hershow
RB, Reyes HLMN, Ha TV, Chander G, Mai NVT, Sripaipan
T, Dowdy DW, Latkin C, Hutton HE, Pettifor
A, Maman S, Frangakis C, Go VF: Evaluating the effects of two
alcohol reduction counseling interventions on intimate partner violence
perpetration: secondary analysis of a three-arm randomized controlled trial
among Vietnamese men with HIV. Addiction 116(10):2712-2723, 2021.
Kolarich A, Frangakis
C, Yarchoan M, Hong K, Georgiades C: Transarterial
chemoembolization in patients with hepatocellular carcinoma with intra-atrial
tumor extension: imaging response and oncologic outcomes. J Vasc Interv Radiol
32(8):1203-1208, 2021.
Nguyen MX, McNaughton Reyes HL, Pence BW, Muessig
K, Hutton HE, Latkin CA, Dowdy D, Chander G,
Lancaster KE, Frangakis C, Sripaipan
T, Ha Tran V, Go VF: The
longitudinal association between depression, anxiety symptoms and HIV outcomes,
and the modifying effect of alcohol dependence among ART clients with hazardous
alcohol use in Vietnam. J Int AIDS Soc 24 Suppl 2:e25746, 2021.
Riello M, Frangakis
CE, Ficek B, Webster KT, Desmond JE, Faria AV, Hillis AE, Tsapkini K: Neural correlates of letter
and semantic fluency in primary progressive aphasia. Brain Sci
12(1):1, 2021.
Zhao Y,
Ficek B, Webster K, Frangakis C, Caffo B,
Hillis AE, Faria A, Tsapkini K: White matter integrity
predicts electrical stimulation (tDCS) and language
therapy effects in primary progressive aphasia. Neurorehabil
Neural Repair 35(1):44-57, 2021.
Blackburn NA, Go VF, Bui Q, Hutton H, Tampi RP, Sripaipan T, Ha TV, Latkin C, Golden S, Golin C, Chander G, Frangakis
C, Gottfredson N, Dowdy DW: Implementation
of two alcohol reduction interventions among persons with hazardous alcohol use
who are living with HIV in Thai Nguyen, Vietnam: a micro-costing analysis. Glob
Health Action 13(1):1814035, 2020.
de Aguiar V, Zhao Y,
Faria A, Ficek B, Webster KT, Wendt H, Wang
Z, Hillis AE, Onyike CU, Frangakis C, Caffo B, Tsapkini
K: Brain volumes as
predictors of tDCS effects in primary progressive
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Shah YS, Zhu AY, Zafar SI, Sarezky
D, Li X, Liu TYA, Sachdeva MM, Woreta FA: Clinical outcomes of secondary
scleral-sutured foldable hydrophilic acrylic intraocular lens placement by
trainees: a single-site analysis. Clin Ophthalmol 15:783-790, 2021.
Ansah DO, Li X, Gehlbach PL, Jun AS, Soiberman US: Prediction error in iris
suture fixated intraocular lenses and long-term stability. Clin Exp
Ophthalmol 48(9):1175-1182, 2020.
Ong SS, Linz MO, Li X, Liu TYA, Han IC, Scott AW: Retinal thickness and
microvascular changes in children with sickle cell disease evaluated by optical
coherence tomography (OCT) and OCT angiography. Am J Ophthalmol 209:88-98, 2020.
Ellenbogen MI, Brotman DJ, Prichett L, Li X, Feldman LS: Contemporary rates of
preoperative cardiac testing prior to inpatient hip fracture surgery. J Hosp Med 14(4):224-228, 2019.
Hosey MM, Leoutsakos
JS, Li X, Dinglas
VD, Bienvenu OJ, Parker AM, Hopkins RO, Needham DM, Neufeld KJ: Screening for posttraumatic
stress disorder in ARDS survivors: validation of the Impact of Event Scale-6
(IES-6). Crit Care 23(1):276,
2019.
Hutton HE, Lesko CR, Li X, Thompson CB, Lau
B, Napravnik S, Mayer KH, Mathews WC, McCaul ME,
Crane HM, Fredericksen RJ, Cropsey KL, Saag M, Christopoulos K, Chander G: Alcohol use patterns and
subsequent sexual behaviors among women, men who have sex with men and men who
have sex with women engaged in routine HIV care in the United States. AIDS Behav
23(6):1634-1646, 2019.
Lewis JF, Zeger SL, Li X, Mann NC, Newgard CD, Haynes S, Wood SF, Dai M, Simon AE,
McCarthy ML: Gender
differences in the quality of EMS care nationwide for chest pain and
out-of-hospital cardiac arrest. Womens Health Issues
29(2):116-124, 2019.
McCarthy ML, Haynes S, Li X, Mann NC, Newgard CD, Lewis JF, Simon AE, Wood SF, Zeger SL: "Make the Call, Don't
Miss a Beat" campaign: effect on emergency medical services use in women
with heart attack signs. Womens Health Issues
29(5):392-399, 2019.
Martin
Lindquist (go
to top of document)
Bailey DH, Jung AJ, Beltz AM, Eronen MI, Gische C, Hamaker EL, Kording KP,
Lebel C, Lindquist MA, Moeller J, Razi A, Rohrer JM, Zhang B, Murayama
K: Causal inference on
human behaviour. Nat Hum Behav
8(8):1448-1459, 2024.
Botvinik-Nezer
R, Petre B, Ceko M, Lindquist MA, Friedman NP, Wager TD: Placebo treatment affects
brain systems related to affective and cognitive processes, but not nociceptive
pain. Nat Commun 15(1):6017, 2024.
Leroux
A, Crainiceanu C, Zeger S, Taub M, Ansari B, Wager TD, Bayman E, Coffey C,
Langefeld C, McCarthy R, Tsodikov A, Brummet C, Clauw DJ, Edwards RR, Lindquist MA, A2CPS
Consortium: Statistical
modeling of acute and chronic pain patient-reported outcomes obtained from
ecological momentary assessment. Pain 165(9):1955-1965, 2024.
Lopez Naranjo C, Razzaq FA, Li M, Wang Y,
Bosch-Bayard JF, Lindquist MA, et al: EEG functional connectivity as
a Riemannian mediator: an application to malnutrition and cognition. Hum
Brain Mapp 45(7):e26698, 2024.
Stewart BW, Keaser ML, Lee H, Margerison SM, Cormie
MA, Moayedi M, Lindquist MA, Chen S, Mathur BN, Seminowicz
DA: Pathological claustrum
activity drives aberrant cognitive network processing in human chronic pain.
Curr Biol 34(9):1953-1966, 2024.
Wang
G, Datta A, Lindquist MA: Improved fMRI-based pain
prediction using Bayesian group-wise functional registration. Biostatistics
25(3):885-903, 2024.
Andreella
A, Finos L, Lindquist MA: Enhanced hyperalignment via spatial prior information. Hum
Brain Mapp 4(4):1725-1740, 2023.
Bogaerts K, Van Den Houte M, Jongen
D, Ly HG, Coppens E, Schruers K, Van Diest I, Jan T,
Van Wambeke P, Petre B, Kragel PA, Lindquist MA, Wager TD, Van Oudenhove L, Van den Bergh O: Brain mediators of negative
affect-induced physical symptom reporting in patients with functional somatic
syndromes. Trans Psychiatry 13(1):285, 2023.
Chin EM, Gorny N, Pekar JJ, Campbell CM, Lindquist
M, Lenz C, Hoon AH Jr, Jantzie LL, Robinson S: A second dimension of
somatosensory system injury? Thalamic volume loss and neuropathic pain in
adults with cerebral palsy and periventricular white matter injury. Ann
Child Neurol Soc 1(4):305-311, 2023.
Gujar SK, Manzoor K, Wongsripuemtet
J, Wang
G, Ryan D, Agarwal S, Lindquist M, Caffo B, Pillai JJ, Sair HI: Identification of the language
network from resting-state fMRI in patients with brain tumors: how accurate are
experts? AJNR Am J Neuroradiol
44(3):274-282, 2023.
Kim J, Andrews-Hanna JR, Eisenbarth H, Lux BK, Kim
HJ, Lee E, Lindquist MA, Losin EAR, Wager TD, Woo CW: A dorsomedial prefrontal
cortex-based dynamic functional connectivity model of rumination. Nat Commun 14(1):3540, 2023.
Meng
Q, Cui
E, Leroux
A, Mowry EM, Lindquist MA, Crainiceanu CM: Quantifying the association
between objectively measured physical activity and multiple sclerosis in the UK
Biobank. Med Sci Sports Exerc
55(12):2194-2202, 2023.
Murtha K, Larsen B, Pines A, Parkes L, Moore TM,
Adebimpe A, Bertolero M, Alexander-Bloch A, Calkins
ME, Davila DG, Lindquist MA, Mackey AP, Roalf
DR, Scott JC, Wolf DH, Gur RC, Gur RE, Barzilay R, Satterthwaite TD: Associations between
neighborhood socioeconomic status, parental education, and executive system
activation in youth. Cereb Cortex 33(4):1058-1073, 2023.
Nath
T, Caffo B, Wager T, Lindquist MA: A machine learning based
approach towards high-dimensional mediation analysis. Neuroimage
268:119843, 2023.
Robinson ML, Garibaldi BT, Lindquist MA: When clinical prediction is
steering the ship, beware the drift of its wake. Ann Intern Med
176(10):1424-1425, 2023.
Sluka KA, Wager TD, ..., Caffo B, ..., Lindquist
M, et al: Predicting
chronic postsurgical pain: current evidence and a novel program to develop
predictive biomarker signatures. Pain 164(9):1912-1926, 2023.
Smith
BB, Zhao
Y, Lindquist MA, Caffo B: Regression models for
partially localized fMRI connectivity analyses. Front Neuroimaging
2:1178359, 2023.
Tang
B, Zhao
Y, Venkataraman A, Tsapkini K, Lindquist MA, Pekar J, Caffo B: Differences in functional
connectivity distribution after transcranial direct-current stimulation: a
connectivity density point of view. Hum Brain Mapping 44(1):170-185,
2023.
Zhao
A, Cui
E, Leroux
A, Lindquist MA, Crainiceanu CM: Evaluating the prediction
performance of objective physical activity measures for incident Parkinson's
disease in the UK Biobank. J Neurol 270(12):5913-5923, 2023.
Zorina-Lichtenwalter K, Bango CI, Van Oudenhove L, Ceko M, Lindquist MA, Grotzinger AD,
Keller MC, Friedman NP, Wager TD: Genetic risk shared across 24
chronic pain conditions: identification and characterization with genomic
structural equation modeling. Pain 164(10):2239-2252, 2023.
Berardi G, Frey-Law L, ..., Lindquist M,
Caffo BS, Crainiceanu C, Zeger S, ..., Taub M, et al: Multi-site observational study
to assess biomarkers for susceptibility or resilience to chronic pain: The
Acute to Chronic Pain Signatures (A2CPS) study protocol. Front Med
9:849214, 2022.
Cheng JC, Anzolin A,
Berry M, Honari H, Paschali M, Lazaridou A, Lee J,
Ellingsen DM, Loggia ML, Grahl A, Lindquist MA, Edwards RR, Napadow V: Dynamic functional brain
connectivity underlying temporal summation of pain in fibromyalgia. Arthritis
Rheumatol 74(4):700-710, 2022.
Honari H, Lindquist MA: Mode decomposition-based
time-varying phase synchronization for fMRI. Neuroimage 261:119519,
2022.
Krimmel SR, DeSouza DD, Keaser ML, Sanjanwala BM, Cowan RP, Lindquist MA, Haythornthwaite JA, Seminowicz
DA: Three dimensions of
association link migraine symptoms and functional connectivity. J Neurosci 42(31):6156-6166, 2022.
Langenecker SA, Westlund Schreiner M, Thomas LR,
Bessette KL, DelDonno SR, Jenkins LM, Easter RE, Stange JP, Pocius SL,
Dillahunt A, Love TM, Phan KL, Koppelmans V, Paulus
M, Lindquist MA, Caffo B, Mickey BJ, Welsh RC: Using network parcels and
resting-state networks to estimate correlates of mood disorder and related
research domain criteria constructs of reward responsiveness and inhibitory
control. Biol Psychiatry Cogn Neurosci Neuroimaging 7(1):76-84, 2022.
Santhanam P, Nath
T, Lindquist MA, Cooper DS: Relationship between TSH
levels and cognition in the young adult: an analysis of the human connectome
project data. J Clin Endocrinol Metab
107(7):1897-1905, 2022.
Wang
G, Datta A, Lindquist MA: Bayesian
functional registration of fMRI activation maps. Ann Appl Stat 16
(3), 1676-1699, 2022.
Weaver C, Xiao
L, Lindquist MA: Single-index
models with functional connectivity network predictors. Biostatistics
24(1):52-67, 2022.
Zhu X, Suarez-Jimenez B, Lazarov A, Such S, Marohasy C, Small SS, Wager TD, Lindquist MA, Lissek S, Neria Y: Sequential fear generalization
and network connectivity in trauma exposed humans with and without
psychopathology. Commun Biol
5(1):1275, 2022.
Barber AD, Hegarty CE, Lindquist M, Karlsgodt KH: Heritability of functional
connectivity in resting state: assessment of the dynamic mean, dynamic
variance, and static connectivity across networks. Cereb Cortex
31(6):2834-2844, 2021.
Beheshtian E, Jalilianhasanpour R, Modir
Shanechi A, Sethi V, Wang
G, Lindquist MA, Caffo BS, Agarwal S, Pillai JJ, Gujar SK, Sair HI: Identification of the somatomotor network from language task-based fMRI compared
with resting-state fMRI in patients with brain lesions. Radiology
301(1):178-184, 2021.
Choe AS, Tang
B, Smith KR, Honari H, Lindquist MA, Caffo BS, Pekar JJ: Phase-locking of resting-state
brain networks with the gastric basal electrical rhythm. PLoS One 16(1):e0244756, 2021.
Duffy KA, Fisher ZF, Arizmendi CA, Molenaar PCM,
Hopfinger J, Cohen JR, Beltz AM, Lindquist MA, Hallquist MN, Gates KM: Detecting task-dependent
functional connectivity in group iterative multiple model estimation with
person-specific hemodynamic response functions. Brain Connect
11(6):418-429, 2021.
Duffy KA, Rosch KS, Nebel MB, Seymour KE, Lindquist
MA, Pekar JJ, Mostofsky SH, Cohen JR: Increased integration between
default mode and task-relevant networks in children with ADHD is associated
with impaired response control. Dev Cogn Neurosci 50:100980, 2021.
Honari H, Choe AS, Lindquist MA: Evaluating phase
synchronization methods in fMRI: a comparison study and new approaches. Neuroimage
228:117704, 2021.
Kragel PA, Ceko M, Theriault J, Chen D, Satpute AB,
Wald LW, Lindquist MA, Feldman Barrett L, Wager TD: A human
colliculus-pulvinar-amygdala pathway encodes negative emotion. Neuron
109(15):2404-2412, 2021.
Ma W, Xiao L,
Liu B, Lindquist MA: A
functional mixed model for scalar on function regression with application to a
functional MRI study. Biostatistics 22(3):439-454, 2021.
Shappell
HM, Duffy KA, Rosch KS, Pekar JJ, Mostofsky SH, Lindquist
MA, Cohen JR: Children with
attention-deficit/hyperactivity disorder spend more time in hyperconnected
network states and less time in segregated network states as revealed by
dynamic connectivity analysis. Neuroimage 229:117753, 2021.
Wang
G, Muschelli J, Lindquist MA: Moderated t-tests for
group-level fMRI analysis. Neuroimage 237:118141, 2021.
Geuter
S, Reynolds Losin EA, Roy M, Atlas LY, Schmidt L, Krishnan A, Koban L, Wager
TD, Lindquist MA: Multiple
brain networks mediating stimulus-pain relationships in humans. Cereb
Cortex 30(7):4204-4219, 2020.
Lindquist
M: Neuroimaging
results altered by varying analysis pipelines. Nature
582(7810):36-37, 2020.
Lurie DJ, Kessler D, Bassett DS, Betzel RF,
Breakspear M, Kheilholz S, Kucyi
A, Liegeois R, Lindquist MA, McIntosh AR,
Poldrack RA, Shine JM, Thompson WH, Bielczyk NZ, Douw
L, Kraft D, Miller RL, Muthuraman M, Pasquini L, Razi A, Vidaurre D, Xie H,
Calhoun VD: Questions
and controversies in the study of time-varying functional connectivity in
resting fMRI. Netw Neurosci
4(1):30-69, 2020.
Mejia
AF, Yue YR, Bolin D, Lindgren F, Lindquist MA: A
Bayesian general linear modeling approach to cortical surface fMRI data
analysis. JASA 115(530):501-520, 2020.
Sobel ME, Lindquist MA: Estimating causal
effects in studies of human brain function: New models, methods and estimands. Ann Appl Stat 14(1): 452-472, 2020.
Zhao Y, Lindquist
MA, Caffo BS: Sparse
principal component based high-dimensional mediation analysis. Comput Stat Data Anal 142: 106835, 2020.
Branscheidt M, Kassavetis P, Anaya M, Rogers D, Huang HD,
Lindquist MA, Celnik P: Fatigue induces long-lasting
detrimental changes in motor-skill learning. Elife 8:e40578, 2019.
Honari H, Choe AS, Pekar JJ, Lindquist MA: Investigating
the impact of autocorrelation on time-varying connectivity. Neuroimage 197:37-48, 2019.
Krause AJ, Prather AA, Wager TD, Lindquist MA, Walker MP: The pain of sleep loss: a
brain characterization in humans. J Neurosci 39(12):2291-2300, 2019.
Lindquist MA, Geuter
S, Wager TD, Caffo BS: Modular
preprocessing pipelines can reintroduce artifacts into fMRI data. Hum Brain Mapp 40(8):2358-2376, 2019.
Schambra
HM, Xu J, Branscheidt M, Lindquist M, Uddin J, Steiner L, Hertler B, Kim N, Berard J, Harran
MD, Cortes JC, Kitago T, Luft A, Krakauer JW, Celnik
PA: Differential poststroke
motor recovery in an arm versus hand muscle in the absence of motor evoked
potentials. Neurorehabil Neural Repair 33(7):568-580, 2019.
Seminowicz DA, Remeniuk B, Krimmel SR, Smith MT, Barrett
FS, Wulff AB, Furman AJ, Geuter
S, Lindquist MA, Irwin MR, Finan PH:
Pain-related nucleus accumbens function: modulation by reward and sleep
disruption. Pain
160(5):1196-1207, 2019.
Shappell
H, Caffo BS, Pekar JJ, Lindquist MA:
Improved state change
estimation in dynamic functional connectivity using hidden semi-Markov models.
Neuroimage 191:243-257, 2019.
van der Miesen MM, Lindquist MA, Wager TD: Neuroimaging-based
biomarkers for pain: state of the field and current directions. Pain Rep 4(4):e751, 2019.
Xu J, Branscheidt M, Schambra H, Steiner L, Widmer M, Diedrichsen J, Goldsmith
J, Lindquist M, Kitago
T, Luft AR, Krakauer JW, Celnik PA, SMARTS Study Group: Rethinking interhemispheric
imbalance as a target for stroke neurorehabilitation. Ann Neurol 85(4):502-513, 2019.
Thomas Louis (go
to top of document)
Berube
S, Kobayashi T, Norris DE, Ruczinski I, Moss WJ, Wesolowski A, Louis TA:
Novel bioinformatic methods
and machine learning approaches reveal candidate biomarkers of the intensity
and timing of past exposure to Plasmodium falciparum. PLoS
Glob Public Health 3(8):e0001840, 2023.
Berube
S, Kobayashi T, Wesolowski A, Norris DE, Ruczinski I, Moss WJ, Louis TA:
A Bayesian hierarchical
model for signal extraction from protein microarrays. Stat Med
42(9):1445-1460, 2023.
Habermann H, Louis TA, Reeder F: Is
autonomy possible and is it a good thing? Stat Public Policy
10(1):2221314, 2023.
Henderson NC, Varadhan
R, Louis T: Improved
small domain estimation via compromise regression weights. JASA
118(544):2793-2809, 2023.
Berube
S, Kobayashi T, Wesolowski A, Norris DE, Ruczinski I, Moss WJ, Louis TA:
A pre-processing pipeline
to quantify, visualize, and reduce technical variation in protein microarray
studies. Proteomics 22(3):e2100033, 2022.
Collaco JM, Raraigh KS,
Betz J, Aksit MA, Blau N, Brown J, Dietz HC,
MacCarrick G, Nogee LM, Sheridan MB, Vernon HJ, Beaty
TH, Louis TA, Cutting GR: Accurate assignment of disease
liability to genetic variants using only population data. Genet Med
24(1):87-99, 2022.
Ippolito MM, Kabuya JB, Hauser M, Kamavu LK, Banda PM, Yanek LR, Malik R, Mulenga M, Bailey
JA, Chongwe G, Louis TA, Shapiro TA, Moss WJ, Southern and Central
Africa International Centers of Excellence for Malaria Research: Whole blood transfusion for
severe malarial anemia in a high plasmodium falciparum transmission setting.
Clin Infect Dis 75(11):1893-1902, 2022.
Louis
TA: Discussion of The
Statistician in Medicine, by Professor Sir Austin Bradford Hill. Stat
Med 40(1):35-36, 2021.
Rothmann M, Crown W, Louis TA, Permutt T,
Ruberg S, Segal J, Scott J: Assessing
and communicating heterogeneity of treatment effects for patient
subpopulations: Panel discussion on considerations in design and analysis. Pharm
Stat 20(5):952-964, 2021.
Daumit
GL, Janssen EM, Jerome GJ, Dalcin AT, Charleston J, Clark JM, Coughlin JW, Yeh
HC, Miller ER, Durkin N, Louis TA, Frick KD, Wang
NY, Appel LJ: Cost of
behavioral weight loss programs implemented in clinical practice: The POWER
trial at Johns Hopkins. Transl Behav Med 10(1):103-113, 2020.
Henderson NC, Louis TA, Rosner GL, Varadhan
R: Individualized
treatment effects with censored data via fully nonparametric Bayesian
accelerated failure time models. Biostatistics 21(1):50-68, 2020.
Brownstein NC, Louis
TA, O'Hagan A, Pendergast J: The role of expert judgment
in statistical inference and evidence-based decision-making. The American Statistician 73(S1):56-68,
2019.
Datta A, Lin
W, Rao A, Diouf D, Kouame A, Edwards JK, Bao L, Louis TA, Baral S: Bayesian estimation of MSM
population size in Cote d'Ivoire. Stat
Public Policy 6(1):1-13, 2019.
Franco C, Little RJA, Louis TA, Slud EV: Comparative study of
confidence intervals for proportions in complex sample surveys. J Surv Stat Methodol 7(3):334-364, 2019.
Li
Q, Louis TA, Liu L,
Wang C, Tsui AO: Subnational
estimation of modern contraceptive prevalence in five sub-Saharan African
countries: a Bayesian hierarchical approach. BMC Public Health 19(1):216, 2019.
Rosenblum MA, Miller P, Reist B, Stuart EA, Thieme
M, Louis TA: Adaptive
design in surveys and clinical trials: similarities, differences and
opportunities for cross‐fertilization. JRSS-A 182(3):963-982, 2019.
John McGready (go
to top of document)
Abusamaan
MS, Ballreich J, Dobs A, Kane B, Maruthur N, McGready
J, Riekert K, Wanigatunga AA, Alderfer M, Alver D, Lalani B, Ringham B, Vandi
F, Zade D, Mathioudakis NN: Effectiveness of artificial
intelligence vs. human coaching in diabetes prevention: a study protocol for a
randomized controlled trial. Trials 25(1):325, 2024.
Graham E, Thorne-Lyman AL, McGready J, Mui
Y, Manohar S, Neupane S, Fanzo J, West KP Jr: Measuring community urbanicity
and its influence on household food security across Nepal's agroecological
zones. Curr Dev Nutr 8(6):103773, 2024.
Gavigan C, Abbey EJ, McGready J, Simonsick EM, Mammen JS: Levothyroxine dosing in older
adults: recommendations derived from the Baltimore Longitudinal Study of Aging.
Endocr Pract
29(8):612-617, 2023.
Kuo SE, Atayeva R, McGready J, Cooney CM, Lifchez SD: Scleroderma and Raynaud
phenomenon: the cold truth regarding the use of operative management. Plast Reconstr Surg
152(2):369e-370e, 2023.
Pasqualino MM, Shaikh S, Islam MT, Parvin S, Ali H,
McGready J, Labrique AB, Hossain MI, Palmer
AC: Household animal
ownership is associated with infant animal source food consumption in
Bangladesh. Matern Child Nutr 19(3):e13495,
2023.
Pasqualino MM, Shaikh S, McGready J, Islam
MT, Ali H, Ahmed T, West KP Jr, Alam M, Hossain MI, Labrique
AB, Palmer AC: An egg
intervention improves dietary intakes but does not fill intake gaps for
multiple micronutrients among infants in rural Bangladesh. J Nutr 153(4):1199-1210, 2023.
Zale AD, Abusamaan MS, McGready
J, Mathioudakis N: Prediction of next glucose
measurement in hospitalized patients by comparing various regression methods:
retrospective cohort study. JMIR Form Res 7:e41577, 2023.
Abbey EJ, McGready J, Oh E, Simonsick EM, Mammen JSR: Thyroid hormone use and
overuse in dementia: results from the Health, Aging and Body Composition Study.
J Am Geriatr Soc 70(11):3308-3311, 2022.
Abbey EJ, McGready J, Sokoll LJ, Simonsick EM, Mammen JSR: Free thyroxine distinguishes
subclinical hypothyroidism from other aging-related changes in those with
isolated elevated thyrotropin. Front Endocrinol 13:858332, 2022.
Zale AD, Abusamaan MS, McGready
J, Mathioudakis N: Development and validation of
a machine learning model for classification of next glucose measurement in
hospitalized patients. EClinicalMedicine
44:101290, 2022.
Abbey EJ, McGready J, Ferrucci L, Simonsick EM, Mammen JSR: Thyroid hormone supplementation
and all-cause mortality in community-dwelling older adults: results from the
Baltimore Longitudinal Study of Aging. J Am Geriatr
Soc 69(5):1283-1290, 2021.
Beres LK, Mody A, Sikombe K, Nicholas LH, Schwartz
S, Eshun-Wilson I, Somwe P, Simbeza
S, Pry JM, Kaumba P, McGready J, Holmes CB, Bolton-Moore C, Sikazwe I,
Denison JA, Geng EH: The
effect of tracer contact on return to care among adult, "lost to
follow-up" patients living with HIV in Zambia: an instrumental variable
analysis. J Int AIDS Soc 24(12):e25853, 2021.
Beres LK, Schwartz S, Simbeza
S, McGready J, Eshun-Wilson I, Mwamba C, Sikombe K, Topp SM, Somwe P, Mody A, Mukamba N, Ehrenkranz PD, Padian N, Pry J,
Moore CB, Holmes CB, Sikazwe I, Denison JA, Geng E: Patterns and predictors of
incident return to HIV care among traced, disengaged patients in Zambia:
analysis of a prospective cohort. J Acquir
Immune Defic Syndr 86(3):313-322, 2021.
Hoover-Fong JE, Alade AY, Hashmi SS, Hecht JT,
Legare JM, Little ME, Liu C, McGready J, Modaff P, Pauli RM,
Rodriguez-Buritica DF, Schulze KJ, Serna ME, Smid CJ, Bober MB: Achondroplasia Natural History
Study (CLARITY): a multicenter retrospective cohort study of achondroplasia in
the United States. Genet Med 23(8):1498-1505, 2021.
Hoover-Fong JE, Schulze KJ, Alade AY, Bober MB,
Gough E, Hashmi SS, Hecht JT, Legare JM, Little ME, Modaff P, Pauli RM,
Rodriguez-Buritica DF, Serna ME, Smid C, Liu C, McGready J: Growth in achondroplasia
including stature, weight, weight-for-height and head circumference from
CLARITY: achondroplasia natural history study-a multi-center retrospective
cohort study of achondroplasia in the US. Orphanet
J Rare Dis 16(1):522, 2021.
Mathioudakis NN, Abusamaan MS, Shakarchi
AF, Sokolinsky S, Fayzullin S, McGready J, Zilbermint M, Saria S, Golden SH: Development and validation of
a machine learning model to predict near-term risk of iatrogenic hypoglycemia
in hospitalized patients. JAMA Netw Open
4(1):e2030913, 2021.
Merrill KG, Campbell JC, Decker MR, McGready
J, Burke VM, Mwansa JK, Miti S, Frimpong C, Kennedy CE, Denison JA: Past-year violence
victimization is associated with viral load failure among HIV-positive
adolescents and young adults. AIDS Behav
25(5):1373-1383, 2021.
Mustafa Ali MK, Sabha MM, Mustafa SK, Banifadel M, Ghazaleh S, Aburayyan
KM, Ghanim MT, Awad MT, Gekonde DN, Ambati AR, Ramahi
A, Elzanaty AM, Nesheiwat Z, Shastri PM, Al-Sarie M, McGready
J: Hospitalization and
post-hospitalization outcomes among teaching internal medicine, employed
hospitalist, and locum tenens hospitalist services in a tertiary center: a
prospective cohort study. J Gen Intern Med 36(10):3040-3051, 2021.
Beres LK, Merrill KG, McGready J, Denison
JA, Schwartz S, Sikazwe I, Decker MR: Intimate partner violence polyvictimisation and HIV among coupled women in Zambia:
Analysis of a population-based survey. Glob Public Health
15(4):558-570, 2020.
Hoover-Fong J, Alade AY, Ain M, Berkowitz I, Bober
M, Carter E, Hecht J, Hoerschemeyer D, Krakow D,
MacCarrick G, Mackenzie WG, Mendoza R, Okenfuss E,
Popplewell D, Raggio C, Schulze K, McGready
J: Blood pressure in
adults with short stature skeletal dysplasias. Am J Med Genet A 182(1):150-161, 2020.
Merrill KG, Campbell JC, Decker MR, McGready
J, Burke VM, Mwansa JK, Miti S, Frimpong C, Kennedy CE, Denison JA: Prevalence of physical and
sexual violence and psychological abuse among adolescents and young adults
living with HIV in Zambia. PLoS One
15(6):e0235203, 2020.
Verma S, Zegar J, Hoge C, McGready J, Sidana
A: Multiparametric
MRI-ultrasound fusion prostate biopsy in patients without prior diagnosis of
prostate cancer: beyond centers of excellence. Aging Male
23(5):1570-1575, 2020.
Wood SN, Kennedy SR, Akumu I, Tallam
C, Asira B, Hameeduddin Z, McGready J,
Zimmerman LA, Kennedy CE, Glass N, Decker MR: Reproductive coercion among
intimate partner violence survivors in Nairobi. Stud Fam Plann 51(4):343-360, 2020.
Babak Moghadas (go
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Moghadas B, Bharadwaj VN, Tobey JP, Tian Y, Stabenfeldt SE, Kodibagkar VD: GdDO3NI enhanced magnetic
resonance imaging allows imaging of hypoxia after brain injury. J Magn Reson Imaging 55(4):1161-1168, 2022.
Veldhuizen J, Chavan R, Moghadas
B, Park JG, Kodibagkar VD, Migrino
RQ, Nikkhah M: Cardiac
ischemia on-a-chip to investigate cellular and molecular response of myocardial
tissue under hypoxia. Biomaterials 281:121336, 2022.
Moghadas B, Solouk A,
Sadeghi D: Development
of chitosan membrane using non-toxic crosslinkers for potential wound dressing
applications. Polymer Bulletin 78: 4919-4929, 2021.
Gupta S, Singh P, Moghadas B,
Grim BJ, Kodibagkar VD, Green MD: Synthesis of PEG and
quaternary ammonium grafted silicone copolymers as nanoemulsifiers.
ACS Applied Polymer Materials 2(5):1856-1864, 2020.
John
Muschelli (go
to top of document)
Leroux
A, Cui
E, Smirnova E, Muschelli J, Schrack JA, Crainiceanu CM: NHANES 2011-2014: Objective
physical activity is the strongest predictor of all-cause mortality. Med
Sci Sports Exerc 56(10):19261934, 2024.
Wright C, Meng
Q, Breshock MR, Atta L, Taub MA, Jager LR, Muschelli
J, Hicks SC: Open
case studies: statistics and data science education through real-world
applications. J Stat Data Sci Educ 32(4):331-344, 2024.
Savonen C, Wright C, Hoffman AM, Muschelli
J, Cox K, Tan FJ, Leek JT: Open-source
Tools for Training Resources - OTTR. J Stat Data Sci Educ
31(1):57-65, 2023.
Zhao C, Tapera TM, Bagautdinova
J, Bourque J, Covitz S, Gur RE, Gur RC, Larsen B, Mehta K, Meisler SL, Murtha
K, Muschelli J, Roalf DR, Sydnor VJ, Valcarcel
AM, Shinohara
RT, Cieslak M, Satterthwaite TD: ModelArray:
An R package for statistical analysis of fixel-wise
data. Neuroimage 271:120037, 2023.
Karas
M, Muschelli J, Leroux
A, Urbanek
JK, Wanigatunga AA, Bai
J, Crainiceanu CM, Schrack JA: Comparison of
accelerometry-based measures of physical activity: retrospective observational
data analysis study. JMIR mHealth uHealth
10(7):e38077, 2022.
Pham DD, Muschelli J, Mejia
AF: ciftiTools:
A package for reading, writing, visualizing, and manipulating CIFTI files in R.
Neuroimage 250:118877, 2022.
Qi
G, Dutta
D, Leroux
A, Ray D, Muschelli J, Crainiceanu C, Chatterjee N: Genome-wide association
studies of 27 accelerometry-derived physical activity measurements identified
novel loci and genetic mechanisms. Genet Epidemiol 46(2):122-138,
2022.
Redd AD, Peetluk LS,
Jarrett BA, Hanrahan C, Schwartz S, Rao A, Jaffe
AE, ..., Muschelli J, et al: Curating the evidence about
COVID-19 for frontline public health and clinical care: the Novel Coronavirus
Research Compendium. Public Health Rep 137(2):197-202, 2022.
Sharrock MF, Mould WA,
Hildreth M, Ryu EP, Walborn N, Awad IA, Hanley DF, Muschelli J: Bayesian deep learning
outperforms clinical trial estimators of intracerebral and intraventricular
hemorrhage volume. J Neuroimaging 32(5):968-976, 2022.
Smirnova E, Mallow C, Muschelli J, Shao Y,
Thiboutot J, Lam A, Rule AM, Crainiceanu C, Yarmus L:
Predictive performance of
selected breath volatile organic carbon compounds in stage 1 lung cancer. Transl Lung Cancer Res 11(6):1009-1018, 2022.
Bennett TD, Moffitt RA,
Hajagos JG, ..., Muschelli J, et al: Clinical characterization and
prediction of clinical severity of SARS-CoV-2 infection among US adults using
data from the US National COVID Cohort Collaborative. JAMA Netw Open (7):e2116901, 2021.
Bowring MG, Wang
Z, Xu
Y, Betz J, Muschelli J, Garibaldi BT, Zeger SL: Outcome-stratified analysis of
biomarker trajectories for patients infected with severe acute respiratory
syndrome coronavirus 2. Am J Epidemiol 190(10):2094-2106, 2021.
Broll S, Urbanek
J, Buchanan D, Chun E, Muschelli J, Punjabi NM, Gaynanova
I: Interpreting blood GLUcose data with R package iglu. PLoS
One 16(4):e0248560, 2021.
Eshaghzadeh Torbati M, Minhas DS, Ahmad G, O'Connor EE, Muschelli J, Laymon
CM, Yang Z, Cohen AD, Aizenstein HJ, Klunk WE,
Christian BT, Hwang SJ, Crainiceanu CM, Tudorascu DL:
A multi-scanner
neuroimaging data harmonization using RAVEL and ComBat.
Neuroimage 245:118703, 2021.
Garibaldi BT, Fiksel
J, Muschelli J, Robinson ML, Rouhizadeh M,
Perin J, Schumock
G, Nagy P, Gray JH, Malapati H, Ghobadi-Krueger M, Niessen TM, Kim BS, Hill PM,
Ahmed MS, Dobkin ED, Blanding R, Abele J, Woods B, Harkness K, Thiemann DR,
Bowring MG, Shah AB, Wang MC, Bandeen-Roche K, Rosen A, Zeger SL, Gupta A: Patient trajectories among
persons hospitalized for COVID-19 : a cohort study. Ann Intern Med
174(1):33-41, 2021.
Leroux
A, Xu
S, Kundu
P, Muschelli J, Smirnova E, Chatterjee N, Crainiceanu C: Quantifying the predictive
performance of objectively measured physical activity on mortality in the UK
Biobank. J Gerontol A Biol Sci Med Sci 76(8):1486-1494, 2021.
Scully EP, Schumock
G, Fu
M, Massaccesi G, Muschelli J, Betz J, Klein
EY, West NE, Robinson M, Garibaldi BT, Bandeen-Roche K, Zeger S, Klein SL,
Gupta A: Sex and gender
differences in testing, hospital admission, clinical presentation, and drivers
of severe outcomes from COVID-19. Open Forum Infect Dis
8(9):ofab448, 2021.
Sharrock MF, Mould WA,
Ali H, Hildreth M, Awad IA, Hanley DF, Muschelli J: 3D deep neural network
segmentation of intracerebral hemorrhage: development and validation for
clinical trials. Neuroinformatics 19(3):403-415, 2021.
Tustison NJ, Cook PA, Holbrook AJ, Johnson HJ, Muschelli
J, Devenyi GA, Duda JT, Das SR, Cullen NC, Gillen DL,
Yassa MA, Stone JR, Gee JC, Avants BB: The ANTsX
ecosystem for quantitative biological and medical imaging. Sci Rep
11(1):9068, 2021.
Wang
G, Muschelli J, Lindquist MA: Moderated t-tests for
group-level fMRI analysis. Neuroimage 237:118141, 2021.
Wongvibulsin S, Garibaldi BT, Antar AAR, Wen
J, Wang MC, Gupta A, Bollinger R, Xu Y, Wang K, Betz JF, Muschelli J,
Bandeen-Roche K, Zeger SL, Robinson ML: Development of Severe COVID-19
Adaptive Risk Predictor (SCARP), a calculator to predict severe disease or
death in hospitalized patients with COVID-19. Ann Intern Med
174(6):777-785, 2021.
Wrobel J, Muschelli J, Leroux
A: Diurnal physical
activity patterns across ages in a large UK based cohort: the UK Biobank study.
Sensors 21(4):1545, 2021.
Gherman A, Muschelli J, Caffo B, Crainiceanu
C: Rxnat:
An open-source R package for XNAT-based repositories. Front Neuroinform 14:572068, 2020.
Hannawi
Y, Muschelli J, Mulder M, Sharrock M, Storm C, Leithner C, Crainiceanu
CM, Stevens RD: Postcardiac
arrest neurological prognostication with quantitative regional cerebral
densitometry. Resuscitation 154:101-109, 2020.
Hansen BM, Ullman N, Muschelli J, Norrving B, Dlugash R, Avadhani
R, Awad I, Zuccarello M, Ziai WC, Hanley DF, Thompson RE, Lindgren A, MISTIE
and CLEAR Investigators: Relationship
of white matter lesions with intracerebral hemorrhage expansion and functional
outcome: MISTIE II and CLEAR III. Neurocrit
Care 33(2):516-524, 2020.
Muschelli
J: ROC and AUC with a
binary predictor: a potentially misleading metric. J Classif
37(3):696-708, 2020.
Rothstein JD, Caulfield LE, Broaddus-Shea ET, Muschelli J, Gilman RH, Winch PJ: "The doctor said
formula would help me": Health sector influences on use of infant formula
in peri-urban Lima, Peru. Soc Sci Med
244:112324, 2020.
Ryan SM, Vestal B, Maier LA, Carlson NE, Muschelli
J: Template creation for
high-resolution computed tomography scans of the lung in R software. Acad Radiol
27(8):e204-e215, 2020.
Valcarcel AM, Muschelli J, Pham DL, Martin
ML, Yushkevich P, Brandstadter R, Patterson KR,
Schindler MK, Calabresi PA, Bakshi R, Shinohara
RT: TAPAS:
A Thresholding Approach for Probability Map Automatic Segmentation in Multiple
Sclerosis. Neuroimage Clin 27:102256, 2020.
Ding T, Cohen AD, O'Connor EE, Karim HT,
Crainiceanu A, Muschelli J, Lopez O,
Klunk WE, Aizenstein HJ, Krafty
R, Crainiceanu CM, Tudorascu DL: An improved algorithm of
white matter hyperintensity detection in elderly adults. Neuroimage Clin 25:102151, 2019.
Muschelli J: Recommendations for
processing head CT data. Front Neuroinform 13:61, 2019.
Muschelli J, Gherman A, Fortin
JP, Avants B, Whitcher B, Clayden JD, Caffo BS, Crainiceanu CM: Neuroconductor:
an R platform for medical imaging analysis. Biostatistics 20(2):218-239, 2019.
Akihiko
Nishimura (go
to top of document)
Bu F, Schuemie MJ, Nishimura
A, Smith LH, Kostka K, Falconer T, McLeggon JA, Ryan
PB, Hripcsak G, Suchard MA:
Bayesian safety
surveillance with adaptive bias correction. Stat Med 43(2):395-418,
2024.
Cai CX, Nishimura A, Bowring MG, Westlund E,
..., Zeger S, et al: Similar
risk of kidney failure among patients with blinding diseases who receive
ranibizumab, aflibercept, and bevacizumab: an Observational Health Data
Sciences and Informatics Network Study. Ophthalmol Retina
8(8):733-743, 2024.
Ding X, Kharrazi H, Nishimura A: Assessing the impact of social
determinants of health on diabetes severity and management. JAMIA Open
7(4):ooae107, 2024.
Khera R, Aminorroaya A,
Dhingra LS, Thangaraj PM, Pedroso Camargos A, Bu F,
Ding X, Nishimura A, et al: Comparative effectiveness of
second-line antihyperglycemic agents for cardiovascular outcomes: a
multinational, federated analysis of LEGEND-T2DM. J Am Coll Cardiol 84(10):904-917, 2024.
Rosenblum M, Chin ET, Ogburn EL, Nishimura
A, Westreich D, Datta A, et al: Misuse of
statistical method results in highly biased interpretation of forensic evidence
in Guyll et al. Law Prob Risk 23(1):mgad010, 2024.
Rosenblum M, Chin ET, Ogburn EL, Nishimura
A, Westreich D, Datta A, et al: Incorrect statistical
reasoning in Guyll et al leads to biased claims about strength of forensic
evidence. Proc Natl Acad Sci USA
121(45):e2315431121, 2024.
Fisher AA, Ji X, Nishimura A, Baele G, Lemey P, Suchard MA: Shrinkage-based random local
clocks with scalable inference. Mol Biol Evol 40(11):msad242,
2023.
Khera R, Dhingra LS, Aminorroaya
A, Li K, Zhou JJ, ..., Nishimura A, et al: Multinational patterns of
second line antihyperglycaemic drug initiation across
cardiovascular risk groups: federated pharmacoepidemiological
evaluation in LEGEND-T2DM. BMJ Med 2(1):e000651, 2023.
Nishimura
A, Suchard MA: Prior-preconditioned
conjugate gradient method for accelerated Gibbs sampling in "Large n,
Large p" Bayesian sparse regression. JASA
118(544):2468-2481, 2023.
Nishimura
A, Suchard MA: Shrinkage
with shrunken shoulders: Gibbs sampling shrinkage model posteriors with
guaranteed convergence rates. Bayesian Analysis 18(2): 367-390,
2023.
Schuemie
MJ, Bu F, Nishimura A, Suchard MA: Adjusting for both sequential
testing and systematic error in safety surveillance using observational data:
empirical calibration and MaxSPRT. Stat Med
42(5):619-631, 2023.
Zhang Z, Nishimura A, Trovao
NS, Cherry JL, Holbrook AJ, Ji X, Lemey P, Suchard MA: Accelerating Bayesian
inference of dependency between mixed-type biological traits. PLoS Comput Biol
19(8):e1011419, 2023.
Nishimura
A, Xie J, Kostka K, Duarte-Salles T, et al: International cohort study
indicates no association between alpha-1 blockers and susceptibility to
COVID-19 in benign prostatic hyperplasia patients. Front Pharmacol 13:945592, 2022.
Wang
Z, Bowring MG, Rosen A, Garibaldi B, Zeger S, Nishimura A: Learning and predicting from
dynamic models for COVID-19 patient monitoring. Stat Sci
37(2):251-265, 2022.
Koenecke A, Powell M, Xiong R, Shen Z, Fischer N,
Huq S, Khalafallah AM, Trevisan M, Sparen P, Carrero
JJ, Nishimura A, Caffo B, Stuart EA, Bai R, Staedtke
V, Thomas DL, Papadopoulos N, Kinzler KW, Vogelstein B, Zhou S, Bettegowda C, Konig MF, Mensh BD, Vogelstein JT, Athey S: Alpha-1 adrenergic receptor
antagonists to prevent hyperinflammation and death from lower respiratory tract
infection. Elife 10:e61700, 2021.
Powell M, Koenecke A, Byrd JB,
Nishimura A, Konig MF, Xiong R, Mahmood S, Mucaj V, Bettegowda
C, Rose L, Tamang S, Sacarny A, Caffo B, Athey S,
Stuart EA, Vogelstein JT: Ten
rules for conducting retrospective pharmacoepidemiological
analyses: example COVID-19 study. Front Pharmacol
12:700776, 2021.
Zhang Z, Nishimura A,
Bastide P, Ji X, Payne RP, Goulder P, Lemey P, Suchard MA: Large-scale
inference of correlation among mixed-type biological traits with phylogenetic
multivariate probit models. Ann Appl Stat 15(1):230-251, 2021.
Duan LL, Young AL, Nishimura A, Dunson DB: Bayesian constraint relaxation.
Biometrika 107(1):191-204, 2020.
Ji X, Zhang Z, Holbrook A, Nishimura A,
Baele G, Rambaut A, Lemey P, Suchard
MA: Gradients do grow on
trees: a linear-time O(N)-dimensional gradient for statistical phylogenetics.
Mol Biol Evol 37(10):3047-3060, 2020.
Nishimura
A, Dunson D: Recycling
intermediate steps to improve Hamiltonian Monte Carlo. Bayesian Analysis
15(4):1087-1108, 2020.
Nishimura
A, Dunson DB, Lu J: Discontinuous
Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods.
Biometrika 107(2):365-380, 2020.
Daniel Obeng (go
to top of document)
Ermer J, Aguiar D, Boden A, Ding B, Obeng
D, Rose M, Vokrot J: Lifecycle management in
pharmaceutical analysis: how to establish an efficient and relevant continued
performance monitoring program. J Pharm Biomed Anal 181:113051,
2020.
Elizabeth
Ogburn (go
to top of document)
Nguyen
TQ, Stuart EA, Scharfstein DO, Ogburn EL: Sensitivity analysis for
principal ignorability violation in estimating
complier and noncomplier average causal effects. Stat Med
43(19):3664-3688, 2024.
Ogburn
EL, Sofrygin O, Diaz
I, van der Laan MJ: Causal
inference for social network data. JASA 119(545):597-611, 2024.
Rosenblum M, Chin ET, Ogburn EL, Nishimura
A, Westreich D, Datta A, et al: Misuse of
statistical method results in highly biased interpretation of forensic evidence
in Guyll et al. Law Prob Risk 23(1):mgad010, 2024.
Rosenblum M, Chin ET, Ogburn EL, Nishimura
A, Westreich D, Datta A, et al: Incorrect statistical
reasoning in Guyll et al leads to biased claims about strength of forensic
evidence. Proc Natl Acad Sci USA
121(45):e2315431121, 2024.
Avolio LN, Smith TJS, Navas-Acien
A, Kruczynski K, Pisanic N, Randad
PR, Detrick B, Fry RC, van Geen A, Goessler W, Karron
RA, Klein SL, Ogburn EL, et al: The Pregnancy, Arsenic, and
Immune Response (PAIR) Study in rural northern Bangladesh. Paediatr Perinat Epidemiol 37(2):165-178,
2023.
Lee
Y, Buchanan AL, Ogburn EL, Friedman SR, Halloran ME, Katenka NV, Wu J,
Nikolopoulos GK: Finding
influential subjects in a network using a causal framework. Biometrics
79(4):3715-3727, 2023.
Miao W, Hu W, Ogburn EL, Zhou XH: Identifying
effects of multiple treatments in the presnece of
unmeasured confounding. JASA 119(543):1953-1967, 2023.
Casey JA, Kioumourtzoglou
MA, Ogburn EL, Melamed A, Shaman J, Kandula S, Neophytou A, Darwin KC,
Sheffield JS, Gyamfi-Bannerman C: Long-term fine particulate
matter concentrations and prevalence of severe acute respiratory syndrome
coronavirus 2: differential relationships by socioeconomic status among
pregnant individuals in New York City. Am J Epidemiol
191(11):1897-1905, 2022.
Di
Stefano L, Ogburn EL, Ram M, Scharfstein DO, Li
T, et al: Hydroxychloroquine/chloroquine
for the treatment of hospitalized patients with COVID-19: An individual
participant data meta-analysis. PLoS
One 17(9):e0273526, 2022.
Ogburn
EL, Cai J, Kuchibhotla AK, Berk RA, Buja A: Contribution
to the discussion of 'Assumption-lean inference for generalised
linear model parameters' by Vansteelandt and Dukes.
JRSS-B 84(3):715-716, 2022.
Thorpe LE, Adhikari S, Lopez P, ..., Ogburn
EL, et al: Neighborhood
socioeconomic environment and risk of type 2 diabetes: associations and
mediation through food environment pathways in three independent study samples.
Diabetes Care 45(4):798-810, 2022.
Clipman
SJ, Mehta SH, Srikrishnan AK, Zook KJ, Duggal P, Mohapatra S, Shanmugam S,
Nandagopal P, Kumar MS, Ogburn E, Lucas GM, Latkin
CA, Solomon SS: Role of
direct and indirect social and spatial ties in the diffusion of HIV and HCV
among people who inject drugs: A cross-sectional community-based network
analysis in New Delhi, India. Elife 10:e69174, 2021.
Haendel MA, Chute CG, Bennett TD, ..., N3C
Consortium (includes Ogburn E): The National COVID Cohort
Collaborative (N3C): Rationale, design, infrastructure, and deployment. J
Am Med Inform Assoc 28(3):427-443, 2021.
Lee
Y, Ogburn EL: Network
dependence can lead to spurious associations and invalid inference. JASA
116(535):1060-1074, 2021.
Ogburn
EL, Rudolph
KE, Morello-Frosch R, Khan A, Casey JA: A warning about using
predicted values from regression models for epidemiologic inquiry. Am J
Epidemiol 190(6):1142-1147, 2021.
Ogburn
EL, Shpitser I: Causal modelling:
the two cultures. Observational Studies 7(1):179-183, 2021.
Kimmel SE, Califf RM, Dean NE, Goodman
SN, Ogburn EL: Editorial:
COVID-19 clinical trials: a teachable moment for improving our research
infrastructure and relevance. Ann Intern Med 173(8):652-653, 2020.
Ogburn
EL, Bierer BE, Brookmeyer R, Choirat C, Dean NE, De Gruttola V, Ellenberg SS, Halloran ME, Hanley DF Jr, Lee
JK, Wang R, Scharfstein DO: Comment:
Aggregating data from COVID-19 trials. Science 368(6496):1198-1199,
2020.
Ogburn
EL, Shpitser I, Lee
Y: Causal
inference, social networks and chain graphs. JRSS-A
183(4):1659-1676, 2020.
Solomon SS, Solomon S, McFall AM, Srikrishnan AK,
Anand S, Verma V, Vasudevan CK, Balakrishnan P, Ogburn EL, Moulton
LH, Kumar MS, Sachdeva KS, Laeyendecker O, Celentano
DD, Lucas GM, Mehta SH, Indian National Collaboration on AIDS Study: Integrated HIV testing,
prevention, and treatment intervention for key populations in India: a cluster-randomised trial. Lancet
HIV 6(5):e283-e296, 2019.
Wang
B, Ogburn EL, Rosenblum M: Analysis of covariance in
randomized trials: More precision and valid confidence intervals, without model
assumptions. Biometrics
75(4):1391-1400, 2019.
Chathurangi
Pathiravasan (go
to top of document)
Ellenbogen MI, Marine JE, Arbab-Zadeh
A, Pathiravasan CH, Swann J, Brotman DJ: Relationship between insurance
status and receipt of cardiac tests and procedures during hospitalization: a
cross-sectional study. J Am Heart Assoc 13(19):e035797, 2024.
Kishan A, Pearson ZC, Li SS, Pressman
Z, Ahiarakwe U, Pathiravasan CH, Srikumaran U: How low can we go? a
randomized controlled trial of low-quantity initial opioid prescriptions for
shoulder surgery. J Shoulder Elbow Surg 33(6):1211-1218, 2024.
Lee J, Wang X, Liu C, Pathiravasan
CH, Benjamin EJ, McManus DD, Murabito JM: Depressive symptoms are not
associated with clinically important levels of digital home blood pressure in
the electronic Framingham Heart Study. Cardiovasc Digit Health J
5(2):50-58, 2024.
Spartano NL, Zhang Y, Liu C, Chernofsky A, Lin H, Trinquart L,
Borrelli B, Pathiravasan CH, Kheterpal V,
Nowak C, Vasan RS, Benjamin EJ, McManus DD, Murabito JM: Agreement between Apple watch
and Actical step counts in a community setting:
cross-sectional investigation from the Framingham Heart Study. JMIR
Biomed Eng 9:e54631, 2024.
Wang X, Zhang Y, Pathiravasan
CH, Ukonu NC, Rong J, Benjamin EJ, McManus DD, Larson
MG, Vasan RS, Hamburg NM, Murabito JM, Liu C, Mitchell GF: Association of arterial
stiffness with mid- to long-term home blood pressure variability in the
Electronic Framingham Heart Study: Cohort Study. JMIR Cardio
8:e54801, 2024.
Zhang Y, Wang X, Pathiravasan
CH, Spartano NL, Lin H, Borrelli B, Benjamin EJ,
McManus DD, Larson MG, Vasan RS, Shah RV, Lewis GD, Liu C, Murabito JM, Nayor M: Association
of smartwatch-based heart rate and physical activity with cardiorespiratory
fitness measures in the community: cohort study. J Med Internet Res
26:e56676, 2024.
Shapira-Daniels A, Kornej
J, Spartano NL, Wang X, Zhang Y, Pathiravasan
CH, Liu C, Trinquart L, Borrelli B, McManus DD,
Murabito JM, Benjamin EJ, Lin H: Step count, self-reported
physical activity, and predicted 5-year risk of atrial fibrillation:
cross-sectional analysis. J Med Internet Res 25:e43123, 2023.
Wang X, Pathiravasan CH, Zhang
Y, Trinquart L, Borrelli B, Spartano
NL, Lin H, Nowak C, Kheterpal V, Benjamin EJ, McManus
DD, Murabito JM, Liu C: Association
of depressive symptom trajectory with physical activity collected by mHealth
devices in the Electronic Framingham Heart Study: cohort study. JMIR
Ment Health 10:e44529, 2023.
Hammond MM, Zhang Y, Pathiravasan
CH, Lin H, Sardana M, Trinquart L, Benjamin EJ,
Borrelli B, Manders ES, Fusco K, Kornej J, Spartano NL, Kheterpal V, Nowak
C, McManus DD, Liu C, Murabito JM: Relations between BMI
trajectories and habitual physical activity measured by a smartwatch in the
electronic cohort of the Framingham Heart Study: Cohort Study. JMIR
Cardio 6(1):e32348, 2022.
Pathiravasan CH, Zhang Y, Wang X, Trinquart L, Benjamin EJ, Borrelli B, McManus DD, Kheterpal V, Lin H, Spartano NL,
Schramm E, Liu C, Murabito JM: Factors associated with
long-term use of digital devices in the electronic Framingham Heart Study. NPJ
Digit Med 5(1):195, 2022.
Zhang Y, Pathiravasan CH,
Hammond MM, Liu H, Lin H, Sardana M, Trinquart L,
Borrelli B, Manders ES, Kornej J, Spartano
NL, Nowak C, Kheterpal V, Benjamin EJ, McManus DD,
Murabito JM, Liu C: Comparison
of daily routines between middle-aged and older participants with and those
without diabetes in the electronic Framingham Heart Study: Cohort Study. JMIR
Diabetes 7(1):e29107, 2022.
Ding EY, Pathiravasan CH,
Schramm E, Borrelli B, Liu C, Trinquart L, Kornej J, Benjamin EJ, Murabito JM, McManus DD: Design, deployment, and
usability of a mobile system for cardiovascular health monitoring within the
electronic Framingham Heart Study. Cardiovasc Digit Health J
2(3):171-178, 2021.
Pathiravasan CH, Zhang Y, Trinquart
L, Benjamin EJ, Borrelli B, McManus DD, Kheterpal V,
Lin H, Sardana M, Hammond MM, Spartano NL, Dunn AL,
Schramm E, Nowak C, Manders ES, Liu H, Kornej J, Liu
C, Murabito JM: Adherence
of mobile app-based surveys and comparison with traditional surveys: eCohort Study. J Med Internet Res 23(1):e24773,
2021.
Kornej J, Murabito JM, Zhang Y, Liu C, Trinquart L, Sardana M, Manders ES, Hammond MM, Spartano NL, Pathiravasan CH, Wang X, Borrelli B,
McManus DD, Benjamin EJ, Lin H: No evidence of association
between habitual physical activity and ECG traits: Insights from the electronic
Framingham Heart Study. Cardiovasc Digit Health 3(1):56-58, 2021.
Sardana M, Lin H, Zhang Y, Liu C, Trinquart L, Benjamin EJ, Manders ES, Fusco K, Kornej J, Hammond MM, Spartano N,
Pathiravasan CH, Kheterpal V, Nowak C,
Borrelli B, Murabito JM, McManus DD: Association of habitual
physical activity with home blood pressure in the electronic Framingham Heart
Study (eFHS): Cross-sectional Study. J Med
Internet Res 23(6):e25591, 2021.
Lin H, Sardana M, Zhang Y, Liu C, Trinquart L, Benjamin EJ, Manders ES, Fusco K, Kornej J, Hammond MM, Spartano
NL, Pathiravasan CH, Kheterpal V, Nowak C,
Borrelli B, Murabito JM, McManus DD: Association of habitual
physical activity with cardiovascular disease risk. Circ Res
127(10):1253-1260, 2020.
Michael
Rosenblum
(go
to top of document)
Mohs R, Bakker A, Rosenzweig-Lipson S, Rosenblum
M, Barton RL, Albert MS, Cohen S, Zeger S, Gallagher M: The HOPE4MCI study: A
randomized double-blind assessment of AGB101 for the treatment of MCI due to AD.
Alzheimers Dement 10(1):e12446, 2024.
Rosenblum
M, Chin ET, Ogburn EL, Nishimura A, Westreich D, Datta A, et al: Misuse of
statistical method results in highly biased interpretation of forensic evidence
in Guyll et al. Law Prob Risk 23(1):mgad010, 2024.
Rosenblum
M, Chin ET, Ogburn EL, Nishimura A, Westreich D, Datta A, et al: Incorrect statistical
reasoning in Guyll et al leads to biased claims about strength of forensic
evidence. Proc Natl Acad Sci USA
121(45):e2315431121, 2024.
Coleman JS, Diniz CP, Fuchs EJ, Marzinke
MA, Aung W, Bakshi RP, Farzadegan H, Bream JH, Nilles
TL, Hudson S, Bumpus NN, Schwartz GJ, Rosenblum MA, Rooney JF, Hendrix
CW: Interaction of depot
medroxyprogesterone acetate and tenofovir disoproxil fumarate/emtricitabine on
peripheral blood mononuclear cells and cervical tissue susceptibility to HIV
infection and pharmacokinetics. J Acquir
Immune Defic Syndr 92(1):89-96, 2023.
Imai K, Rosenblum M, Rothmann M: 14th Annual University of
Pennsylvania Conference on statistical issues in clinical trials/subgroup
analysis in clinical trials: Opportunities and challenges (afternoon panel
discussion). Clin Trials 20(4):405-415, 2023.
Wang
B, Susukida R, Mojtabai R, Amin-Esmaeili M, Rosenblum
M: Model-robust
inference for clinical trials that improve precision by stratified
randomization and covariate adjustment. JASA 118(542):1152-1163,
2023.
Williams N, Rosenblum M, Diaz
I: Optimising precision and power by machine learning in randomised trials with ordinal and time-to-event outcomes
with an application to COVID-19. JRSS-A 185(4):2156-2178, 2022.
Askenase
MH, Goods BA, Beatty HE, Steinschneider AF, ..., Thompson RE, ..., ICHseq Investigators MISTIE III Investigators (includes Rosenblum
M): Longitudinal
transcriptomics define the stages of myeloid activation in the living human
brain after intracerebral hemorrhage. Sci Immunol 6(56):eabd6279,
2021.
Benkeser
D, Diaz
I, Luedtke A, Segal J, Scharfstein D, Rosenblum M: Improving precision and power
in randomized trials for COVID-19 treatments using covariate adjustment, for
binary, ordinal, and time-to-event outcomes. Biometrics
77(4):1467-1481, 2021.
Steingrimsson
JA, Betz J, Qian
T, Rosenblum M: Optimized
adaptive enrichment designs for three-arm trials: learning which subpopulations
benefit from different treatments. Biostatistics 22(2):283-297,
2021.
Canto MI, Trindade AJ, Abrams J, Rosenblum
M, Dumot J, Chak A, Iyer P, Diehl D, Khara HS,
Corbett FS, McKinley M, Shin EJ, Waxman I, Infantolino A, Tofani C, Samarasena J, Chang K, Wang
B, Goldblum J, Voltaggio L, Montgomery E, Lightdale
CJ, Shaheen NJ: Multifocal cryoballoon ablation for eradication of Barrett's
esophagus-related neoplasia: a prospective multicenter clinical trial.
Am J Gastroenterol 115(11):1879-1890, 2020.
McGinty EE, Stone EM, Kennedy-Hendricks A, Bandara
S, Murphy KA, Stuart EA, Rosenblum MA, Daumit
GL: Effects of Maryland's
Affordable Care Act Medicaid health home waiver on quality of cardiovascular
care among people with serious mental illness. J Gen Intern Med
35(11):3148-3158, 2020.
Rosenblum
M, Fang EX, Liu H: Optimal,
two‐stage,
adaptive enrichment designs for randomized trials, using sparse linear
programming. JRSS-B 82(3):749-772, 2020.
Diaz
I, Colantuoni E, Hanley DF, Rosenblum
M: Improved precision in
the analysis of randomized trials with survival outcomes, without assuming
proportional hazards. Lifetime Data
Anal 25(3):439-468, 2019.
Hanley DF, Thompson RE, Rosenblum M, Yenokyan G, ..., Betz JF, Sugar EA, et al: Efficacy and safety of
minimally invasive surgery with thrombolysis in intracerebral haemorrhage evacuation (MISTIE III): a randomised,
controlled, open-label, blinded endpoint phase 3 trial. Lancet 393(10175):1021-1032, 2019.
Huang
EJ, Fang EX, Hanley DF, Rosenblum M:
Constructing a
confidence interval for the fraction who benefit from treatment, using
randomized trial data. Biometrics
75(4):1228-1239, 2019.
Rosenblum M, Wang
B: The critical role of
statistical analyses in maximizing power gains from covariate-adaptive trial
designs. JAMA Nets Open
2(4):e190789, 2019.
Rosenblum MA, Miller P, Reist B, Stuart EA, Thieme M, Louis
TA: Adaptive
design in surveys and clinical trials: similarities, differences and
opportunities for cross‐fertilization. JRSS-A 182(3):963-982, 2019.
Wang
B, Ogburn EL, Rosenblum M: Analysis of covariance in
randomized trials: More precision and valid confidence intervals, without model
assumptions. Biometrics
75(4):1391-1400, 2019.
Wu AW, Weston CM, Ibe CA, Ruberman
CF, Bone L, Boonyasai RT, Hwang S, Gentry J, Purnell
L, Lu Y, Liang S, Rosenblum M: The Baltimore
Community-based Organizations Neighborhood Network: Enhancing Capacity Together
(CONNECT) cluster RCT. Am J Prev Med
57(2):e31-e41, 2019.
Ingo
Ruczinski (go
to top of document)
Grant-McAuley W, Morgenlander
WR, Ruczinski I, Kammers
K, Laeyendecker O, Hudelson SE, Thakar M,
Piwowar-Manning E, et al: Identification
of antibody targets associated with lower HIV viral load and viremic control.
PLoS One 19(9):e0305976, 2024.
Keener R, Chhetri SB, Connelly CJ, Taub MA, ..., Ruczinski
I, et al: Validation of
human telomere length multi-ancestry meta-analysis association signals
identifies POP5 and KBTBD6 as human telomere length regulation genes. Nat
Commun 15(1):4417, 2024.
Liebhoff
AM, Venkataraman T, Morgenlander WR, Na M, Kula T,
Waugh K, Morrison C, Rewers M, Longman R, Round J, Elledge S, Ruczinski
I, Langmead B, Larman HB: Efficient
encoding of large antigenic spaces by epitope prioritization with Dolphyn. Nat Commun
15(1):1577, 2024.
Morgenlander WR, Chia WN, Parra B, Monaco DR, Ragan I, Pardo CA, Bowen R, Zhong D,
Norris DE, Ruczinski I, Durbin A, Wang LF, Larman HB, Robinson ML: Precision arbovirus serology
with a pan-arbovirus peptidome. Nat Commun
15(1):5833, 2024.
Szczesny B, Boorgula MP,
Chavan S, Campbell M, Johnson RK, Kammers
K, ..., Ruczinski I, ..., Taub MA, et al: Multi-omics in nasal
epithelium reveals three axes of dysregulation for asthma risk in the African
Diaspora populations. Nat Commun
15(1):4546, 2024.
Berube
S, Kobayashi T, Norris DE, Ruczinski I, Moss WJ, Wesolowski A, Louis TA:
Novel bioinformatic methods
and machine learning approaches reveal candidate biomarkers of the intensity
and timing of past exposure to Plasmodium falciparum. PLoS
Glob Public Health 3(8):e0001840, 2023.
Berube
S, Kobayashi T, Wesolowski A, Norris DE, Ruczinski I, Moss WJ, Louis TA:
A Bayesian hierarchical
model for signal extraction from protein microarrays. Stat Med
42(9):1445-1460, 2023.
Grant-McAuley W, Morgenlander
W, ..., Ruczinski I, Kammers
K, Laeyendecker O, Larman HB, Eshleman SH: Comprehensive profiling of
pre-infection antibodies identifies HIV targets associated with viremic control
and viral load. Front Immunol 14:1178520, 2023.
Huffaker MF, Kanchan K, Bahnson HT, Ruczinski
I, Shankar G, Leung DYM, Baloh C, Du Toit G, Lack G, Nepom
GT, Mathias RA: Epidermal
differentiation complex genetic variation in atopic dermatitis and peanut
allergy. J Allergy Clin Immunol 151(4):1137-1142, 2023.
Li X, Quick C, Zhou H, Gaynor SM, ..., NHLBI
Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Ruczinski
I), et al: Powerful,
scalable and resource-efficient meta-analysis of rare variant associations in
large whole genome sequencing studies. Nat Genet 55(1):154-164,
2023.
Recto K, Kachroo P, Huan
T, Van Den Berg D, Lee GY, Bui H, Lee DH, Gereige J,
Yao C, Hwang SJ, Joehanes R, Weiss ST; NHLBI
Trans-Omics in Precision Medicine (TOPMed) Consortium (includes Ruczinski I),
O'Connor GT, Levy D, DeMeo D: Epigenome-wide DNA methylation
association study of circulating IgE levels
identifies novel targets for asthma. EBioMedicine
95:104758, 2023.
Weinstock JS, Gopakumar J, Burugula
BB, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes
Ruczinski I), et al: Aberrant
activation of TCL1A promotes stem cell expansion in clonal haematopoiesis.
Nature 616(7958):755-763, 2023.
Wong WJ, Emdin C, Bick
AG, ..., NHLBI TOPMed Hematology Working Group (includes Ruczinski I),
et al: Clonal haematopoiesis and risk of chronic liver disease. Nature
616(7958):747-754, 2023.
Angkeow
JW, Monaco DR, Chen
A, ..., Ruczinski I, et al: Phage display of environmental
protein toxins and virulence factors reveals the prevalence, persistence, and
genetics of antibody responses. Immunity 55(6):1051-1066, 2022.
Berube
S, Kobayashi T, Wesolowski A, Norris DE, Ruczinski I, Moss WJ, Louis TA:
A pre-processing pipeline
to quantify, visualize, and reduce technical variation in protein microarray
studies. Proteomics 22(3):e2100033, 2022.
Chen
A, Kammers
K, Larman HB, Scharpf
RB, Ruczinski I: Detecting
and quantifying antibody reactivity in PhIP-Seq data
with BEER. Bioinformatics 38(19):4647-4649, 2022.
Chen
A, Kammers
K, Larman HB, Scharpf
RB, Ruczinski I: Detecting
antibody reactivities in Phage ImmunoPrecipitation
Sequencing data. BMC Genomics 23(1):654, 2022.
Grant-McAuley W, Laeyendecker
O, Monaco D, Chen
A, Hudelson SE, Klock E, Brookmeyer R, ..., Ruczinski I, Kammers
K, et al: Evaluation of
multi-assay algorithms for cross-sectional HIV incidence estimation in settings
with universal antiretroviral treatment. BMC Infect Dis 22(1):838,
2022.
Hu X, Qiao D, Kim W, Moll M, ..., Ruczinski
I, et al: Polygenic
transcriptome risk scores for COPD and lung function improve cross-ethnic
portability of prediction in the NHLBI TOPMed program. Am J Hum Genet
109(5):857-870, 2022.
Kanchan K, Grinek
S, Bahnson HT, Ruczinski I, Shankar G, Larson D, et al: HLA alleles and sustained
peanut consumption promote IgG4 responses in subjects protected from peanut
allergy. J Clin Invest 132(1):e152070, 2022.
Kanchan K, Shankar G, Huffaker
MF, Bahnson HT, Chinthrajah RS, Sanda S, Manohar M,
Ling H, Paschall JE, Toit GD, Ruczinski I, Togias
A, Lack G, Nadeau KC, Jones SM, Nepom GT, Mathias RA:
HLA-associated outcomes in
peanut oral immunotherapy trials identify mechanistic and clinical determinants
of therapeutic success. Front Immunol 13:941839, 2022.
Katz DH, Tahir UA, Bick AG, Pampana A, ..., National Heart, Lung, and Blood Institute
TOPMed (Trans-Omics for Precision Medicine) Consortium (includes Ruczinski
I): Whole genome sequence
analysis of the plasma proteome in black adults provides novel insights into
cardiovascular disease. Circulation 145(5):357-370, 2022.
Li Z, Li X, Zhou H, ..., NHLBI
Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Ruczinski
I), et al: A framework for
detecting noncoding rare-variant associations of large-scale whole-genome
sequencing studies. Nat Methods 19(12):1599-1611, 2022.
Mason SE, Moreta-Martinez R,
Labaki WW, ..., COPDGene Investigators (includes Ruczinski
I): Longitudinal
association between muscle loss and mortality in ever smokers. Chest
161(4):960-970, 2022.
Ngwa
JS, Yanek LR, Kammers
K, Kanchan K, Taub MA, Scharpf
RB, Faraday N, Becker LC, Mathias RA, Ruczinski I: Secondary analyses for
genome-wide association studies using expression quantitative trait loci. Genet
Epidemiol 46(3-4):170-181, 2022.
Selvaraj MS, Li X, Li Z, ...,
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Ruczinski
I), et al: Whole genome
sequence analysis of blood lipid levels in >66,000 individuals. Nat Commun 13(1):5995, 2022.
Tahir UA, Katz DH, Avila-Pachecho J, ..., NHLBI Trans-Omics for Precision Medicine 1
Consortium (includes Ruczinski I), et al: Whole genome association study
of the plasma metabolome identifies metabolites linked to cardiometabolic
disease in black individuals. Nat Commun
13(1):4923, 2022.
Taub MA, Conomos
MP, Keener R, Iyer KR ..., Ruczinski
I, et al: Genetic
determinants of telomere length from 109,122 ancestrally diverse whole-genome
sequences in TOPMed. Cell Genom 2(1):100084, 2022.
Wainschtein P, Jain D, Zheng Z, TOPMed Anthropometry Working
Group, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Ruczinski
I), et al: Assessing the
contribution of rare variants to complex trait heritability from whole-genome
sequence data. Nat Genet 54(3):263-273, 2022.
Bin L, Malley C, Taylor P,
..., Ruczinski I, et al: Whole genome sequencing
identifies novel genetic mutations in patients with eczema herpeticum. Allergy
76(8):2510-2523, 2021.
Cade BE, Lee J, Sofer T, Wang H, Zhang M, Chen H,
Gharib SA, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
(includes Ruczinski I), et al: Whole-genome association
analyses of sleep-disordered breathing phenotypes in the NHLBI TOPMed program.
Genome Med 13(1):136, 2021.
Chen
A, Laeyendecker O, Eshleman SH, Monaco DR, Kammers
K, Larman HB, Ruczinski I: A top scoring pairs classifier
for recent HIV infections. Stat Med 40(11):2604-2612, 2021.
Daya M, Cox C, Acevedo N, Boorgula
MP, Campbell M, ..., Ruczinski I, et al: Multiethnic genome-wide and
HLA association study of total serum IgE level. J
Allergy Clin Immunol 148(6):1589-1595, 2021.
Kammers
K, Chen
A, Monaco DR, Hudelson SE, Grant-McAuley W, Moore RD, Alter G, Deeks SG,
Morrison CS, Eller LA, Blankson JN, Laeyendecker O, Ruczinski
I, Eshleman SH, Larman HB: HIV
antibody profiles in HIV controllers and persons with treatment-induced viral
suppression. Front Immunol 12:740395, 2021.
Kammers
K, Taub MA, Rodriguez B, Yanek LR, Ruczinski I, Martin J, Kanchan K,
Battle A, Cheng L, Wang ZZ, Johnson AD, Leek JT, Faraday N, Becker LC, Mathias
RA: Transcriptional profile
of platelets and iPSC-derived megakaryocytes from whole-genome and RNA
sequencing. Blood 137(7):959-968, 2021.
Kasela
S, Ortega VE, Martorella M, ..., NHLBI Trans-Omics for Precision Medicine
(TOPMed) Consortium (includes Ruczinski I), et al: Genetic and non-genetic
factors affecting the expression of COVID-19-relevant genes in the large airway
epithelium. Genome Med 13(1):66, 2021.
Keramati
AR, Chen MH, Rodriguez BAT, ..., Ruczinski I, ..., Taub MA, et al: Genome sequencing unveils
a regulatory landscape of platelet reactivity. Nat Commun
12(1):3626, 2021.
Luo Y, Kanai M, Choi W, ..., NHLBI Trans-Omics for
Precision Medicine (TOPMed) Consortium (includes Ruczinski I), et al: A high-resolution HLA
reference panel capturing global population diversity enables multi-ancestry
fine-mapping in HIV host response. Nat Genet 53(10):1504-1516, 2021.
Morgenlander WR, Henson SN, Monaco DR, Chen
A, Littlefield K, Bloch EM, Fujimura E, Ruczinski I, et al: Antibody responses to endemic
coronaviruses modulate COVID-19 convalescent plasma functionality. J
Clin Invest 131(7):e146927, 2021.
Natarajan P, Pampana A,
Graham SE, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
(includes Ruczinski I), et al: Chromosome Xq23 is associated
with lower atherogenic lipid concentrations and favorable cardiometabolic
indices. Nat Commun 12(1):2182, 2021.
Ray D, Venkataraghavan S, Zhang W, Leslie EJ, Hetmanski JB, Weinberg SM, Murray JC, Marazita ML, Ruczinski
I, Taub MA, Beaty TH: Pleiotropy
method reveals genetic overlap between orofacial clefts at multiple novel loci
from GWAS of multi-ethnic trios. PLoS
Genet 17(7):e1009584, 2021.
Reiner AP, Raffield LM, Franceschini N,
Auer PL, Lange EM, Nickerson DA, Zakai NA, Correa A, Olson N, National Heart,
Lung, and Blood Institute Trans-Omics for Precision Medicine Consortium
(includes Ruczinski I): Effect of sickle cell trait
and APOL1 genotype on the association of soluble uPAR
with kidney function measures in black Americans. Clin J Am Soc Nephrol
16(2):287-289, 2021.
Sofer T, Zheng X, Laurie CA, ..., NHLBI Trans-Omics
for Precision Medicine (TOPMed) Consortium (includes Ruczinski I), et
al: Variant-specific
inflation factors for assessing population stratification at the phenotypic
variance level. Nat Commun 12(1):3506,
2021.
Taliun D, Harris DN, Kessler MD, ..., Ruczinski
I, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, et al: Sequencing of 53,831 diverse
genomes from the NHLBI TOPMed Program. Nature 590(7845):290-299,
2021.
Yang C, Hallmark B, Chai JC, O'Connor TD, Reynolds
LM, Wood AC, Seeds M, Chen YI, Steffen LM, Tsai MY, Kaplan RC, Daviglus ML, Mandarino LJ, Fretts AM, Lemaitre RN, Coletta
DK, Blomquist SA, Johnstone LM, Tontsch C, Qi Q, Ruczinski I, Rich SS,
Mathias RA, Chilton FH, Manichaikul A: Impact of Amerind ancestry and
FADS genetic variation on omega-3 deficiency and cardiometabolic traits in
Hispanic populations. Commun Biol
4(1):918, 2021.
Zhang W, Venkataraghavan S, Hetmanski
JB, Leslie EJ, Marazita ML, Feingold E, Weinberg SM, Ruczinski I, Taub
MA, Scott AF, Ray D, Beaty TH: Detecting gene-environment
interaction for maternal exposures using case-parent trios ascertained through
a case with non-syndromic orofacial cleft. Front Cell Dev Biol
9:621018, 2021.
Bick AG, Weinstock JS, Nandakumar SK,
..., NHLBI Trans-Omics for Precision Medicine Consortium (includes Ruczinski
I), et al: Inherited causes
of clonal haematopoiesis in 97,691 whole genomes.
Nature 586(7831):763-768, 2020.
Bishop MR, Diaz Perez KK, Sun M, Ho S,
Chopra P, Mukhopadhyay N, Hetmanski JB, Taub MA, ...,
Ruczinski I, et al: Genome-wide
enrichment of de novo coding mutations in orofacial cleft trios. Am J
Hum Genet 107(1):124-136, 2020.
Cristiano
S, McKean D, Carey J, Bracci P, Brennan P, Chou M, Du M, Gallinger S, Goggins
MG, Hassan MM, Hung RJ, Kurtz RC, Li D, Lu L, Neale R, Olson S, Petersen G,
Rabe KG, Fu
J, Risch H, Rosner GL, Ruczinski I, Klein
AP, Scharpf
RB: Bayesian copy number
detection and association in large-scale studies. BMC Cancer
20(1):856, 2020.
Hecker J, Ruczinski I, Cho MH,
Silverman EK, Coull B, Lange C: A flexible and nearly
optimal sequential testing approach to randomized testing: QUICK-STOP. Genet
Epidemiol 44(2):139-147, 2020.
Kanchan K, Iyer K, Yanek LR,
Carcamo-Orive I, Taub MA, ..., Ruczinski I, et al: Genomic integrity of human
induced pluripotent stem cells across nine studies in the NHLBI NextGen program.
Stem Cell Res 46:101803, 2020.
Kessler MD, Loesch DP, Perry JA, ...,
TOPMed Population Genetics Working Group (includes Ruczinski I), et al: De novo mutations across
1,465 diverse genomes reveal mutational insights and reductions in the Amish
founder population. Proc Natl Acad Sci U S A
117(5):2560-2569, 2020.
Li X, Li Z, Zhou H, Gaynor SM, Liu Y,
..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Ruczinski
I), et al: Dynamic
incorporation of multiple in silico functional annotations empowers rare
variant association analysis of large whole-genome sequencing studies at scale.
Nat Genet 52(9):969-983, 2020.
Milne S, Li X, Hernandez Cordero AI,
Yang CX, Cho MH, Beaty TH, Ruczinski I, Hansel NN, Bosse Y, Brandsma CA,
Sin DD, Obeidat M: Protective
effect of club cell secretory protein (CC-16) on COPD risk and progression: a
Mendelian randomisation study. Thorax
75(11):934-943, 2020.
Sergeant S, Hallmark B, Mathias RA,
Mustin TL, Ivester P, Bohannon ML, Ruczinski I, Johnstone L, Seeds MC,
Chilton FH: Prospective
clinical trial examining the impact of genetic variation in FADS1 on the
metabolism of linoleic acid- and ɣ-linolenic
acid-containing botanical oils. Am J Clin Nutr
111(5):1068-1078, 2020.
Strand M, Austin E, Moll M, ..., Ruczinski
I, et al: A risk prediction
model for mortality among smokers in the COPDGene
study. Chronic Obstr Pulm
Dis 7(4):346-361, 2020.
Vince N, Limou
S, Daya M, ..., Ruczinski I, ..., Taub M, et al: Association of HLA-DRB1∗09:01
with tIgE levels among African-ancestry individuals
with asthma. J Allergy Clin Immunol 146(1):147-155, 2020.
Zhao X, Qiao D, Yang C, Kasela S, ..., Ruczinski I, et al: Whole genome sequence analysis
of pulmonary function and COPD in 19,996 multi-ethnic participants. Nat Commun 11(1):5182, 2020.
Boorgula MP, Taub MA, Rafaels N, Daya M,
Campbell M, Chavan S, Shetty A, Cheadle C, Barkataki
S, Fan J, David G, Beaty TH, Ruczinski
I, Hanifin J, Schneider LC, Gallo RL, Paller AS, Beck LA, Leung DY, Mathias RA,
Barnes KC: Replicated
methylation changes associated with eczema herpeticum and allergic response.
Clin Epigenetics 11(1):122, 2019.
Bureau A, Begum F, Taub MA, Hetmanski JB, Parker MM, Albacha-Hejazi
H, Scott AF, Murray JC, Marazita ML, Bailey-Wilson JE, Beaty TH, Ruczinski I: Inferring disease risk
genes from sequencing data in multiplex pedigrees through sharing of rare
variants. Genet Epidemiol
43(1):37-49, 2019.
Daya M, Rafaels N, Brunetti TM, ..., Ruczinski I, et al: Association study in
African-admixed populations across the Americas recapitulates asthma risk loci
in non-African populations. Nat Commun 10(1):880, 2019.
Eshleman SH, Laeyendecker
O, Kammers
K, Chen
A, Sivay MV, Kottapalli S, Sie BM, Yuan T, Monaco DR, Mohan D, Wansley D, Kula
T, Morrison C, Elledge SJ, Brookmeyer R, Ruczinski
I, Larman HB: Comprehensive
profiling of HIV antibody evolution. Cell
Rep 27(5):1422-1433, 2019.
Fu JM,
Leslie EJ, Scott AF, Murray JC, Marazita ML, Beaty TH, Scharpf
RB, Ruczinski I: Detection of de novo copy
number deletions from targeted sequencing of trios. Bioinformatics 35(4):571-578, 2019.
Harris DN, Ruczinski I, Yanek LR, Becker LC, Becker DM, Guio H, Cui T, Chilton
FH, Mathias RA, O'Connor TD: Evolution of hominin
polyunsaturated fatty acid metabolism: from Africa to the New World. Genome Biol Evol
11(5):1417-1430, 2019.
Kachroo P, Hecker J, Chawes BL, Ahluwalia TS,
..., National Heart, Lung, and Blood Institute Trans-Omics for Precision
Medicine (TOPMed) Consortium (includes Ruczinski
I): Whole genome
sequencing identifies CRISPLD2 as a lung function gene in children with asthma.
Chest 156(6):1068-1079, 2019.
Keramati AR, Yanek LR, Iyer K, Taub MA, Ruczinski I, Becker DM, Becker LC,
Faraday N, Mathias RA: Targeted
deep sequencing of the PEAR1 locus for platelet aggregation in European and
African American families. Platelets
30(3):380-386, 2019.
Lowe KE, Regan EA, Anzueto A, ..., Ruczinski I, et al: COPDGene
2019: Redefining the diagnosis of chronic obstructive pulmonary disease. Chronic Obstr Pulm Dis 6(5):384-399, 2019.
Obeidat M, Faiz A, Li X, van den Berge
M, Hansel NN, Joubert P, Hao K, Brandsma CA, Rafaels N, Mathias R, Ruczinski I, Beaty TH, Barnes KC, Man
SFP, Pare PD, Sin DD: The
pharmacogenomics of inhaled corticosteroids and lung function decline in COPD.
Eur Respir J 54(6):1900521, 2019.
Sherman RM, Forman J, Antonescu V, Puiu
D, ..., Ruczinski I, et al: Assembly of a pan-genome
from deep sequencing of 910 humans of African descent. Nat Genet 51(1):30-35, 2019.
Sherman T, Fu J, Scharpf
RB, Bureau A, Ruczinski I: Detection of rare disease
variants in extended pedigrees using RVS. Bioinformatics 35(14):2509-2511, 2019.
Tietz T, Selinski S, Golka K, Hengstler
JG, Gripp S, Ickstadt K, Ruczinski I, Schwender
H: Identification of
interactions of binary variables associated with survival time using survivalFS. Arch Toxicol 93(3):585-602, 2019.
Wang AW, Avramopoulos D, Lori A, Mulle
J, Conneely K, Powers A, Duncan E, Almli L, Massa N, McGrath J, Schwartz AC,
Goes FS, Weng L, Wang R, Yolken R, Ruczinski I, Gillespie CF, Jovanovic T,
Ressler K, Pulver AE, Pearce BD: Genome-wide association
study in two populations to determine genetic variants associated with
Toxoplasma gondii infection and relationship to schizophrenia risk. Prog Neuropsychopharmacol
Biol Psychiatry 92:133-147, 2019.
Winters A, Bahnson HT, Ruczinski I, Boorgula
MP, Malley C, Keramati AR, Chavan S, Larson D, Cerosaletti K, Sayre PH, Plaut M, Du Toit G, Lack G, Barnes
KC, Nepom GT, Mathias RA, Immune Tolerance Network
LEAP Study Team: The
MALT1 locus and peanut avoidance in the risk for peanut allergy. J Allergy Clin Immunol 143(6):2326-2329,
2019.
Ahmed Sabit (go
to top of document)
Ehsani JP, Duren ML, Grant BJB, Sabit A,
Yenokyan G: Prevalence and
profiles of risky driving behavior among US teenagers. JAMA Netw Open 7(7):e2425263, 2024.
Ehsani JP, Michael J, Duren M, Drabo E, Sabit
A: Prevalence and use of
driver monitoring systems: a national survey in the United States. J Law
Med Ethics 52(S1):26-30, 2024.
Mudalegundi S, Clifton M, Lifchez S, LaPorte D,
Ramanathan S, Sabit AH, Woreta F: Perspectives on application
and interview capping in residency selection of surgical subspecialties. J
Surg Educ 81(8):1013-1023, 2024.
Winicki NM, Radomski SN, Ciftci Y, Sabit AH,
Johnston FM, Greer JB: Mortality
risk prediction for primary appendiceal cancer. Surgery
175(6):1489-1495, 2024.
Ehsani JP, Michael JP, Frattaroli S, Yenokyan G, Sabit
A: Public support for
vehicle technology to prevent operation by impaired drivers. JAMA Netw Open 6(4):e239152. 2023.
Hassan MK, Houston R, Karim MS, Sabit
A: CEO duality and firm
performance during the 2020 coronavirus outbreak. J Econ Asymmetries
27:e00278, 2023.
Osman SMI, Sabit A: Predictors of COVID-19
vaccination rate in USA: a machine learning approach. Mach Learn Appl
10:100408, 2022.
Patrick Sadil
(go
to top of document)
Halchenko YO, Goncalves M, Ghosh S, ..., Sadil
P, et al: HeuDiConv-flexible DICOM conversion into structured
directory layouts. Journal of Open Source Software 9(99):5839, 2024.
Sadil P, Cowell RA, Huber DE: The push-pull of serial
dependence effects: Attraction to the prior response and repulsion from the
prior stimulus. Psychon Bull Rev
31(1):259-273, 2024.
Sadil P, Cowell RA, Huber DE: A modeling framework for
determining modulation of neural-level tuning from non-invasive human fMRI data.
Commun Biol 5(1):1244, 2022.
Cowell RA, Barense
MD, Sadil PS: A
roadmap for understanding memory: decomposing cognitive processes into
operations and representations. eNeuro
6(4):ENEURO.0122-19.2019, 2019.
Sadil P, Cowell RA, Huber DE: A hierarchical Bayesian state
trace analysis for assessing monotonicity while factoring out subject, item,
and trial level dependencies. J Math Psychol 90:118-131, 2019.
Sadil P, Potter KW, Huber DE, Cowell RA: Connecting the dots without
top-down knowledge: evidence for rapidly-learned low-level associations that
are independent of object identity. J Exp Psychol Gen
148(6):1058-1070, 2019.
Elizabeth Stuart (go
to top of document)
Brantner
CL, Nguyen
TQ, Tang T, Zhao C, Hong H, Stuart EA: Comparison of methods that
combine multiple randomized trials to estimate heterogeneous treatment effects.
Stat Med 43(7):1291-1314, 2024.
Castro F, Stuart E, Deal J, Varadaraj V,
Swenor BK: STEM doctorate
recipients with disabilities experienced early in life earn lower salaries and
are underrepresented among higher academic positions. Nat Hum Behav 8(1):72-81, 2024.
Chen R, Aherrera A, Jones
MR, Stuart EA, Davis MF, Rule AM: Association between prolonged
dual use of cigarettes and e-cigarettes and psychosocial factors among U.S.
smokers: secondary data analysis from the 2013 to 2019 PATH study. Hyg Environ Health Adv 11:100103, 2024.
Eddelbuettel JCP, Kennedy-Hendricks A, Meiselbach MK, Stuart
EA, Huskamp HA, Busch AB, Hollander MAG, Schilling C,
Barry CL, Eisenberg MD: Changes
in healthcare spending attributable to high deductible health plan offer among
enrollees with comorbid substance use disorder and cardiovascular disease. J
Gen Intern Med 39(11):1993-2000, 2024.
Ettman CK, Badillo-Goicoechea E, Stuart EA: Financial strain, schooling
modality and mental health of US adults living with children during the
COVID-19 pandemic. J Epidemiol Community Health 78(10):662-668,
2024.
Ettman CK, Brantner
CL, Albert M, Goes FS, Mojtabai R, Spivak S, Stuart EA, Zandi
PP: Trends in
telepsychiatry and in-person psychiatric care for depression in an academic
health system, 2017-2022. Psychiatr
Serv 75(2):178-181, 2024.
Ettman CK, Subramanian M, Fan AY, Adam GP, Abdalla
SM, Galea S, Stuart EA: Assets and depression in U.S.
adults during the COVID-19 pandemic: a systematic review. Soc Psychiatry
Psychiatr Epidemiol 59(4):571-583, 2024.
Flores JP, Kahn G, Penfold RB, Stuart EA, Ahmedani BK, Beck A, Boggs JM, Coleman KJ, Daida YG, Lynch
FL, Richards JE, Rossom RC, Simon GE, Wilcox HC: Adolescents who do not endorse
risk via the Patient Health Questionnaire before self-harm or suicide. JAMA
Psychiatry 81(7):717-726, 2024.
Gemmill A, Margerison CE, Stuart EA, Bell
SO: Infant deaths after
Texas' 2021 ban on abortion in early pregnancy. JAMA Pediatr
178(8):784-791, 2024.
Gibbons JB, Li W, Stuart EA, Saloner B: Simulated impact of mobile
opioid treatment program units on increasing access to methadone for opioid use
disorder. Health Serv Res 59(5):e14271, 2024.
Kabata
D, Stuart EA, Shintani A: Prognostic score-based model
averaging approach for propensity score estimation. BMC Med Res Methodol 24(1):228, 2024.
Kahn GD, Wilcox HC, Stuart EA: Identifying causal risk
factors for self-harm among adolescents with U.S. Child Protective Services
contact. Arch Suicide Res 28(1):173-183, 2024.
McGinty EE, Alegria M, Beidas
RS, Braithwaite J, Kola L, Leslie DL, Moise N, Mueller B, Pincus HA, Shidhaye
R, Simon K, Singer SJ, Stuart EA, Eisenberg MD: The Lancet Psychiatry
Commission: transforming mental health implementation research. Lancet
Psychiatry 11(5):368-396, 2024.
McGinty EE, Seewald NJ, Bandara S, ..., Stuart
EA: Scaling interventions
to manage chronic disease: innovative methods at the intersection of health
policy research and implementation science. Prev Sci 25(Suppl
1):96-108, 2024.
Mehta R, Hochberg M, Shardell
M, Ryan A, Dong Y, Beamer BA, Peer J, Stuart EA, Schuler M, Gallo JJ,
Rathbun AM: Evaluation of
dynamic effects of depressive symptoms on physical function in knee
osteoarthritis. Arthritis Care Res 76(5):673-681, 2024.
Murphy KA, Sarker
E, Stuart EA, Cook C, Goldsholl S, Daumit GL: Effect of care management on
cholesterol for individuals with serious mental illness: a secondary analysis
of an RCT. J Gen Intern Med 39(2):354-356, 2024.
Nguyen
TQ, Carlson MC, Stuart EA: Identification of complier and
noncomplier average causal effects in the presence of latent missing-at-random
(LMAR) outcomes: a unifying view and choices of assumptions. Biostatistics
25(4):978-996, 2024.
Nguyen
TQ, Stuart EA: Multiple
imputation for propensity score analysis with covariates missing at random:
some clarity on "within" and "across" methods. Am J
Epidemiol 193(10):1470-1476, 2024.
Nguyen
TQ, Stuart EA, Scharfstein DO, Ogburn EL: Sensitivity analysis for
principal ignorability violation in estimating
complier and noncomplier average causal effects. Stat Med
43(19):3664-3688, 2024.
Olsen RB, Orr LL, Bell SH, Petraglia E,
Badillo-Goicoechea E, Miyaoka A, Stuart EA: Using a multi-site RCT to
predict impacts for a single site: do better data and methods yield more
accurate predictions? J Res Educ Eff 17(1):184-210, 2024.
Pampati
S, Liddon N, Stuart EA, Waller LA, Mpofu JJ, Lopman
B, Adkins SH, Guest JL, Jones J: Disparities in unmet health
care needs among US children during the COVID-19 pandemic. Ann Fam Med
22(2):130-139, 2024.
Rathbun AM, Shardell
MD, Gallo JJ, Ryan AS, Stuart EA, Schuler MS, Dong Y, Beamer B, Mehta R,
Peer JE, Hochberg MC: Time-varying
treatment effect modification of oral analgesic effectiveness by depressive
symptoms in knee osteoarthritis: an application of structural nested mean
models in a prospective cohort. Int J Epidemiol 53(1):dyad152, 2024.
Ringlein
GV, Ettman CK, Stuart EA: Income or job loss and
psychological distress during the COVID-19 pandemic. JAMA Netw Open 7(7):e2424601, 2024.
Robertson SE, Joyce NR, Steingrimsson
JA, Stuart EA, Aberle DR, Gatsonis CA, Dahabreh IJ: Comparing lung cancer
screening strategies in a nationally representative US population using
transportability methods for the National Lung Cancer Screening Trial. JAMA
Netw Open 7(1):e2346295, 2024.
Robertson SE, Steingrimsson
JA, Joyce NR, Stuart EA, Dahabreh IJ: Estimating subgroup effects in
generalizability and transportability analyses. Am J Epidemiol
193(1):149-158, 2024.
Ross RK, Nunes EV, Olfson
M, Shulman M, Krawczyk N, Stuart EA, Rudolph
KE: Comparative
effectiveness of extended-release naltrexone and sublingual buprenorphine for
treatment of opioid use disorder among Medicaid patients. Addiction
119(11):1975-1986, 2024.
Si Y, Bandoli G, Cole KM,
Daniele Fallin M, Stuart EA, Gurka KK, Althoff KN, Thompson WK, HBCD
Design Workgroup and Biostatistics Workgroup: Advancing high quality
longitudinal data collection: Implications for the HEALthy
Brain and Child Development (HBCD) Study design and recruitment. Dev Cogn Neurosci 69:101432,
2024.
Stone EM, Wise E, Stuart EA, McGinty EE: Experiences of health care
services among people with cognitive disabilities and mental health conditions.
Disabil Health J 17(2):101547, 2024.
Tormohlen KN, Eisenberg MD, Fingerhood
MI, Yu J, McCourt AD, Stuart EA, Rutkow L,
Quintero L, White SA, McGinty EE: Trends in opioid use disorder
outpatient treatment and telehealth utilization before and during the COVID-19
pandemic. Psychiatr Serv
75(1):72-75, 2024.
Tormohlen KN, Schmid I, Stuart EA, Davis C,
McGinty EE: State laws that
require coprescribing opioids and naloxone and codispensing practices. Am J Prev Med
66(1):138-145, 2024.
Assini-Meytin LC, Nair R,
McGinty EB, Stuart EA, Letourneau EJ: Is the Affordable Care Act
Medicaid expansion associated with reported incidents of child sexual abuse?
Child Maltreat 28(2):203-208, 2023.
Bell SO, Stuart EA, Gemmill A: Texas' 2021 ban on abortion in
early pregnancy and changes in live births. JAMA 330(3):281-282,
2023.
Brantner
CL, Chang
TH, Nguyen
TQ, Hong H, Di
Stefano L, Stuart EA: Methods
for integrating trials and non-experimental data to examine treatment effect
heterogeneity. Stat Sci 38(4):640-654, 2023.
Busch AB, Kennedy-Hendricks A, Schilling C, Stuart
EA, Hollander M, Meiselbach MK, Barry CL, Huskamp HA, Eisenberg MD: Measurement approaches to
estimating methadone continuity in opioid use disorder care. Med Care
61(5):314-320, 2023.
Carroll G, Solomon KT, Heil J, Saloner B, Stuart
EA, Patel EY, Greifer N, Salzman M, Murphy E, Baston
K, Haroz R: Impact of
administering buprenorphine to overdose survivors using emergency medical
services. Ann Emerg Med 81(2):165-175, 2023.
Chokesuwattanaskul R, Ananwattanasuk T,
Hughey AB, Stuart EA, et al: Three-dimensional-guided and
ICE-guided transseptal puncture for cardiac ablations: a propensity score match
study. J Cardiovasc Electrophysiol
34(2):382-388, 2023.
Dahabreh IJ,
Robins JM, Haneuse SJA, Saeed I, Robertson SE, Stuart EA, Hernan MA: Sensitivity analysis using
bias functions for studies extending inferences from a randomized trial to a
target population. Stat Med 42(13):2029-2043, 2023.
Dang LE, Gruber S, Lee H, Dahabreh
IJ, Stuart EA, Williamson BD, Wyss R, Diaz
I, et al: A causal roadmap
for generating high-quality real-world evidence. J Clin Transl Sci 7(1):e212, 2023.
Diouf I, Malpas CB, Sharmin S, ..., Stuart
EA, et al: Effectiveness of
multiple disease-modifying therapies in relapsing-remitting multiple sclerosis:
causal inference to emulate a multiarm randomised trial. J Neurol Neurosurg Psychiatry
94(12):1004-1011, 2023.
Eddelbuettel JCP, Barry CL, Kennedy-Hendricks A, Busch AB, Hollander MAG, Huskamp HA, Meiselbach MK,
Schilling C, Stuart EA, Eisenberg MD: High-deductible health plans
and nonfatal opioid overdose. Med Care 61(9):601-604, 2023.
Ettman CK, Badillo-Goicoechea E, Stuart EA: Evolution of depression and
anxiety during the COVID-19 pandemic and across demographic groups in a large
sample of U.S. adults. AJPM Focus 2(4):100140, 2023.
Ettman CK, Fan AY, Subramanian M, Adam GP, Badillo
Goicoechea E, Abdalla SM, Stuart EA, Galea S: Prevalence of depressive
symptoms in U.S. adults during the COVID-19 pandemic: a systematic review. SSM
Popul Health 21:101348, 2023.
Gazit S, Saciuk Y, Perez
G, Peretz A, Ben-Tov A, Stuart EA, Patalon T: Hybrid immunity against
reinfection with SARS-CoV-2 following a previous SARS-CoV-2 infection and
single dose of the BNT162b2 vaccine in children and adolescents: a target trial
emulation. Lancet Microbe 4(7):e495-e505, 2023.
Griffin BA, Schuler MS, Pane J, Patrick SW, Smart
R, Stein BD, Grimm G, Stuart EA: Methodological considerations
for estimating policy effects in the context of co-occurring policies. Health
Serv Outcomes Res Methodol 23(2):149-165, 2023.
Griffin BA, Schuler MS, Stone EM, Patrick SW, Stein
BD, Nascimento de Lima P, Griswold M, Scherling A, Stuart EA: Identifying optimal methods
for addressing confounding bias when estimating the effects of state-level
policies. Epidemiology 34(6):856-864, 2023.
Hansford HJ, Cashin AG, Jones MD, Swanson
SA, Islam N, Dahabreh IJ, Dickerman BA, Egger M,
Garcia-Albeniz X, Golub RM, Lodi S, Moreno-Betancur M, Pearson SA, Schneeweiss
S, Sterne J, Sharp MK, Stuart EA, Hernan MA, Lee H, McAuley JH: Development of the TrAnsparent ReportinG of
observational studies Emulating a Target trial (TARGET) guideline. BMJ
Open 13(9):e074626, 2023.
Hansford HJ, Cashin AG, Jones MD, Swanson
SA, Islam N, Douglas SRG, Rizzo RRN, Devonshire JJ, Williams SA, Dahabreh IJ, Dickerman BA, Egger M, Garcia-Albeniz X, Golub
RM, Lodi S, Moreno-Betancur M, Pearson SA, Schneeweiss S, Sterne JAC, Sharp MK,
Stuart EA, et al: Reporting
of observational studies explicitly aiming to emulate randomized trials: a
systematic review. JAMA Netw Open
6(9):e2336023, 2023.
Hollander MAG, Kennedy-Hendricks A, Schilling C, Meiselbach MK, Stuart EA, Huskamp
HA, Busch AB, Eddelbuettel JCP, Barry CL, Eisenberg
MD: Do high-deductible
health plans incentivize changing the timing of substance use disorder
treatment? Med Care Res Rev 80(5):530-539, 2023.
Hong H, Liu L, Mojtabai R, Stuart EA: Calibrated meta-analysis to
estimate the efficacy of mental health treatments in target populations: an
application to paliperidone trials for treatment of schizophrenia. BMC
Med Res Methodol 23(1):150, 2023.
Kennedy-Hendricks A, Eddelbuettel
JCP, Bicket MC, Meiselbach MK, Hollander MAG, Busch
AB, Huskamp HA, Stuart EA, Barry CL, Eisenberg
MD: Impact of high
deductible health plans on U.S. adults with chronic pain. Am J Prev Med
65(5):800-808, 2023.
Li F, Hong H, Stuart EA: A note on semiparametric
efficient generalization of causal effects from randomized trials to target
populations. Commun Stat Theory Methods
52(16):5767-5798, 2023.
Lupton-Smith
C, Goicoechea EB, Collins M, Lessler
J, Grabowski MK, Stuart EA: Consistency between household
and county measures of onsite schooling during the COVID-19 pandemic. J
Res Educ Eff 16(3):419-441, 2023.
McCourt AD, Tormohlen KN, Schmid I, Stone EM, Stuart
EA, Davis CS, Bicket MC, McGinty EE: Effects of opioid prescribing
cap laws on opioid and other pain treatments among persons with chronic pain.
J Gen Intern Med 38(4):929-937, 2023.
McGinty EE, Tormohlen KN, Seewald NJ, Bicket MC,
McCourt AD, Rutkow L, White SA, Stuart EA: Effects of U.S. state medical
cannabis laws on treatment of chronic noncancer pain. Ann Intern Med
176(7):904-912, 2023.
Meiselbach MK, Huskamp HA, Eddelbuettel
JCP, Kennedy-Hendricks A, Hollander MAG, Schilling C, Busch AB, Stuart
EA, Barry CL, Eisenberg MD: Choice
of high-deductible health plans among enrollees with a substance use disorder.
J Subst Use Addict Treat 154:209152, 2023.
Nadamuni
M, Takvorian KS, Stuart E, Muller D, Vining T, Knoper K, Hardin CC,
Sacks CA: Good intentions
to treat. NEJM Evid 2(3):EVIDstat2300007, 2023.
Nolley EP, Sahetya SK,
Hochberg CH, Hossen S, Hager DN, Brower RG, Stuart EA, Checkley
W: Outcomes among
mechanically ventilated patients with severe pneumonia and acute hypoxemic
respiratory failure from SARS-CoV-2 and other etiologies. JAMA Netw Open 6(1):e2250401, 2023.
Purtle J, Goldman ML, Stuart EA: Interpreting between-state
variation in 988 suicide and crisis lifeline call volume rates. Psychiatr Serv 74(9):901, 2023.
Purtle J, Lindsey MA, Raghavan R, Stuart EA:
National Suicide Prevention
Lifeline 2020 in-state answer rates, stratified by call volume rates and
geographic region. Psychiatr Serv
74(2):204-205, 2023.
Samuel LJ, Crews DC, Swenor BK, Zhu J, Stuart
EA, Szanton SL, Kim B, Dwivedi P, Li Q, Reed NS,
Thorpe RJ Jr: Supplemental
nutrition assistance program access and racial disparities in food insecurity.
JAMA Netw Open 6(6):e2320196, 2023.
Samuel LJ, Zhu J, Dwivedi P, Stuart EA, Szanton SL, Li Q, Thorpe RJ Jr, Reed NS, Swenor BK: Food insecurity gaps in the
Supplemental Nutrition Assistance Program based on disability status. Disabil Health J 16(4):101486, 2023.
Sharifi V, Shahrivar Z, Zarafshan H, Ashezary SB, Arabgol F, Khademi
M, Jafarinia M, Hajebi A,
Abolhassani F, Emami S, Ashkezari AB, Stuart
EA, Mojtabai R, Wissow L: Effect of general practitioner
training in a collaborative child mental health care program on children's
mental health outcomes in a low-resource setting: a cluster randomized trial.
JAMA Psychiatry 80(1):22-30. 2023.
Solomon KT, O'Connor J, Gibbons JB, Kilaru AS,
Feder KA, Xue L, Saloner B, Stuart EA, Cole ES, Hulsey E, Meisel Z,
Patel E, Donohue JM: Association
between hospital adoption of an emergency department treatment pathway for
opioid use disorder and patient initiation of buprenorphine after discharge.
JAMA Health Forum 4(3):e230245, 2023.
Williamson BD, Wyss R, Stuart EA, Dang LE,
Mertens AN, Neugebauer RS, Wilson A, Gruber S: An application of the Causal
Roadmap in two safety monitoring case studies: Causal inference and outcome
prediction using electronic health record data. J Clin Transl Sci 7(1):e208, 2023.
Bandara S, Maniates H, Hulsey E, Smith JS,
DiDomenico E, Stuart EA, Saloner B, Krawczyk N: Opioid treatment program
safety measures during the COVID-19 pandemic: a statewide survey. BMC
Health Serv Res 22(1):418, 2022.
Brenneke SG, Nordeck CD, Riehm KE, Schmid I,
Tormohlen KN, Smail EJ, Johnson RM, Kalb LG, Stuart EA, Thrul J: Trends
in cannabis use among U.S. adults amid the COVID-19 pandemic. Int J Drug
Policy 100:103517, 2022.
Chang
TH, Nguyen
TQ, Lee
Y, Jackson JW, Stuart EA: Flexible propensity score
estimation strategies for clustered data in observational studies. Stat
Med 41(25):5016-5032, 2022.
Chang
TH, Stuart EA: Propensity
score methods for observational studies with clustered data: A review. Stat
Med 41(18):3612-3626, 2022.
Darden ME, Dowdy D, Gardner L, Hamilton BH, Kopecky
K, Marx M, Papageorge NW, Polsky D, Powers KA, Stuart EA, Zahn MV: Modeling to inform
economy-wide pandemic policy: bringing epidemiologists and economists together.
Health Econ 31(7):1291-1295, 2022.
Eisenberg MD, Kennedy-Hendricks A, Schilling C,
Busch AB, Huskamp HA, Stuart EA, Meiselbach MK, Barry CL: The impact of HDHPs on service
use and spending for substance use disorders. Am J Manag Care
28(10):530-536, 2022.
Gibbons JB, Stuart EA, Saloner B: Methadone on wheels-a new
option to expand access to care through mobile units. JAMA Psychiatry
79(3):187-188, 2022.
Greifer
N, Stuart EA: Matching
methods for confounder adjustment: an addition to the epidemiologist's toolbox.
Epidemiol Rev 43(1):118-129, 2022.
Haber NA, Clarke-Deelder
E, Feller A, Smith ER, Salomon JA, MacCormack-Gelles B, Stone EM,
Bolster-Foucault C, Daw JR, Hatfield LA, Fry CE, Boyer CB, Ben-Michael E, Joyce
CM, Linas BS, Schmid I, Au EH, Wieten SE, Jarrett B, Axfors
C, Nguyen VT, Griffin BA, Bilinski A, Stuart EA: Problems with evidence
assessment in COVID-19 health policy impact evaluation: a systematic review of
study design and evidence strength. BMJ Open 12(1):e053820, 2022.
Haber NA, Wieten SE, Rohrer JM, Arah OA, Tennant
PWG, Stuart EA, et al: Causal and associational
language in observational health research: a systematic evaluation. Am J
Epidemiol 191(12):2084-2097, 2022.
Hecht AA, Stuart EA, Pollack Porter KM: Factors associated with
universal free school meal provision adoption among US public schools. J
Acad Nutr Diet
122(1):49-63, 2022.
Kahn GD, Rabinowitz JA, Stuart EA, Wilcox
HC: Prospective examination
of self-harm up to three years after contact with Child Protective Services
(CPS). Int J Inj Contr
Saf Promot 29(1):15-22,
2022.
Kennedy-Hendricks A, Schilling CJ, Busch AB, Stuart
EA, Huskamp HA, Meiselbach
MK, Barry CL, Eisenberg MD: Impact
of high deductible health plans on continuous buprenorphine treatment for
opioid use disorder. J Gen Intern Med 37(4):769-776, 2022.
Krawczyk N, Maniates H, Hulsey E, Smith JS,
DiDomenico E, Stuart EA, Saloner B, Bandara S: Shifting medication treatment
practices in the COVID-19 pandemic: a statewide survey of Pennsylvania opioid
treatment programs. J Addict Med 16(6):645-652, 2022.
Letourneau EJ, Assini-Meytin
LC, Nair R, Stuart EA, Decker MR, McGinty EB: Health insurance expansion and
family violence prevention: a conceptual framework. Child Abuse Negl 129:105664, 2022.
Lupton-Smith
C, Badillo-Goicochea E, Chang
TH, Maniates H, Riehm KE, Schmid I, Stuart EA: Factors associated with
county-level mental health during the COVID-19 pandemic. J Community
Psychol 50(5):2431-2442, 2022.
Lupton-Smith
C, Stuart EA, McGinty EE, Dalcin AT, Jerome GJ, Wang
NY, Daumit GL: Determining predictors of
weight loss in a behavioral intervention: a case study in the use of Lasso
regression. Front Psychiatry 12:707707, 2022.
McGinty EE, Bicket MC, Seewald NJ, Stuart
EA, Alexander GC, Barry CL, McCourt AD, Rutkow L: Effects of state opioid
prescribing laws on use of opioid and other pain treatments among commercially
insured U.S. adults. Ann Intern Med 175(5):617-627, 2022.
McGinty EE, Nair R, Assini-Meytin
LC, Stuart EA, Letourneau EJ: Impact of Medicaid expansion
on reported incidents of child neglect and physical abuse. Am J Prev Med
62(1):e11-e20, 2022.
Meiselbach MK, Kennedy-Hendricks A, Schilling C, Busch AB, Huskamp
HA, Stuart EA, Hollander MAG, Barry CL, Eisenberg MD: High deductible health plans
and spending among families with a substance use disorder. Drug Alcohol
Depend 241:109681, 2022.
Nordeck CD, Riehm KE, Smail EJ, Holingue
C, Kane JC, Johnson RM, Veldhuis CB, Kalb LG, Stuart EA, Kreuter F, Thrul J: Changes
in drinking days among United States adults during the COVID-19 pandemic. Addiction
117(2):331-340, 2022.
Riehm KE, Badillo Goicoechea E, Wang FM, Kim E,
Aldridge LR, Lupton-Smith
CP, Presskreischer R, Chang
TH, LaRocca S, Kreuter F, Stuart EA: Association of non-pharmaceutical
interventions to reduce the spread of SARS-CoV-2 with anxiety and depressive
symptoms: a multi-national study of 43 countries. Int J Public Health
67:1604430, 2022.
Riehm KE, Brignone E, Gallo JJ, Stuart EA,
Mojtabai R: Emergency
health services use and medically-treated suicidal behaviors following
depression screening among adolescents: A longitudinal cohort study. Prev
Med 161:107148, 2022.
Riehm KE, Brignone E, Stuart EA, Gallo JJ,
Mojtabai R: Diagnoses and
treatment after depression screening in primary care among youth. Am J
Prev Med 62(4):511-518, 2022.
Schilling CJ, Eisenberg MD, Kennedy-Hendricks A,
Busch AB, Huskamp HA, Stuart EA, Meiselbach MK, Barry CL: Effects of high-deductible
health plans on enrollees with mental health conditions with and without
substance use disorders. Psychiatr Serv
73(5):518-525, 2022.
Schmid I, Rudolph
KE, Nguyen
TQ, Hong H, Seamans MJ, Ackerman
B, Stuart EA: Comparing
the performance of statistical methods that generalize effect estimates from
randomized controlled trials to much larger target populations. Commun Stat Simul Comput
51(8):4326-4348, 2022.
Schmid I, Stuart EA, McCourt AD, Tormohlen
KN, Stone EM, Davis CS, Bicket MC, McGinty EE: Effects of state opioid
prescribing cap laws on opioid prescribing after surgery. Health Serv
Res 57(5):1154-1164, 2022.
Smail EJ, Riehm KE, Veldhuis CB, Johnson RM, Holingue C, Stuart EA, Kalb LG, Thrul
J: Associations of
household structure and presence of children in the household with mental
distress during the early stages of the U.S. COVID-19 pandemic. Fam Syst
Health 40(1):46-59, 2022.
Solomon KT, Bandara S, Reynolds IS, Krawczyk N,
Saloner B, Stuart E, Connolly E: Association between
availability of medications for opioid use disorder in specialty treatment and
use of medications among patients: A state-level trends analysis. J Subst Abuse Treat 132:108424, 2022.
Stone EM, Tormohlen KN, McCourt AD, Schmid I, Stuart
EA, Davis CS, Bicket MC, McGinty EE: Association between state
opioid prescribing cap laws and receipt of opioid prescriptions among children
and adolescents. JAMA Health Forum 3(8):e222461, 2022.
Stuart
EA, Schmid I, Nguyen
T, Sarker
E, Pittman
A, Benke
K, Rudolph
K, Badillo-Goicoechea E, Leoutsakos
JM: Assumptions not often
assessed or satisfied in published mediation analyses in psychology and
psychiatry. Epidemiol Rev 43(1):48-52, 2022.
Tormohlen KN, McCourt AD, Schmid I, Stone EM, Stuart
EA, Davis C, Bicket MC, McGinty EE: State prescribing cap laws'
association with opioid analgesic prescribing and opioid overdose. Drug
Alcohol Depend 240:109626, 2022.
Wiens KE, Smith
CP, Badillo-Goicoechea E, Grantz
KH, Grabowski MK, Azman
AS, Stuart EA, Lessler
J: In-person schooling and
associated COVID-19 risk in the United States over spring semester 2021. Sci
Adv 8(16):eabm9128, 2022.
Yin X, Mishra-Kalyan PS, Sridhara R, Stewart MD, Stuart
EA, Davi RC: Exploring the
potential of external control arms created from patient level data: a case
study in non-small cell lung cancer. J Biopharm
Stat 32(1):204-218, 2022.
Ackerman
B, Lesko CR, Siddique J, Susukida R, Stuart
EA: Generalizing randomized
trial findings to a target population using complex survey population data.
Stat Med 40(5):1101-1120, 2021.
Ackerman
B, Siddique J, Stuart EA: Calibrating validation samples
when accounting for measurement error in intervention studies. Stat
Methods Med Res 30(5):1235-1248, 2021.
Antiporta
DA, Cutipe YL, Mendoza M, Celentano DD, Stuart
EA, Bruni A: Depressive
symptoms among Peruvian adult residents amidst a national lockdown during the
COVID-19 pandemic. BMC Psychiatry 21(1):111, 2021.
Austin PC, Stuart EA: The effect of a constraint on
the maximum number of controls matched to each treated subject on the
performance of full matching on the propensity score when estimating risk
differences. Stat Med 40(1):101-118, 2021.
Badillo-Goicoechea E, Chang
TH, Kim E, LaRocca S, Morris K, Deng X, Chiu S, Bradford A, Garcia A, Kern C,
Cobb C, Kreuter F, Stuart EA: Global trends and predictors
of face mask usage during the COVID-19 pandemic. BMC Public Health
21(1):2099, 2021.
Ben-Michael E, Feller A, Stuart EA: A trial emulation approach for
policy evaluations with group-level longitudinal data. Epidemiology
32(4):533-540, 2021.
Brenneke SG, Nordeck CD, Riehm KE, Schmid I,
Tormohlen KN, Smail EJ, Johnson RM, Kalb LG, Stuart EA, Thrul J: Trends
in cannabis use among U.S. adults amid the COVID-19 pandemic. Int J Drug
Policy 100:103517, 2021.
Burgdorf JG, Arbaje AI, Stuart
EA, Wolff JL: Unmet family
caregiver training needs associated with acute care utilization during home
health care. J Am Geriatr Soc
69(7):1887-1895, 2021.
Burgdorf JG, Stuart EA, Arbaje
AI, Wolff JL: Family
caregiver training needs and medicare home health
visit utilization. Med Care 59(4):341-347, 2021.
Dahabreh IJ, Haneuse SJA, Robins
JM, Robertson SE, Buchanan AL, Stuart EA, Hernan MA: Study designs for extending
causal inferences from a randomized trial to a target population. Am J
Epidemiol 190(8):1632-1642, 2021.
Dick AS, Lopez DA, Watts AL, ..., Stuart EA,
et al: Meaningful
associations in the adolescent brain cognitive development study. Neuroimage
239:118262, 2021.
Eisenberg MD, McCourt A, Stuart EA, Rutkow L, Tormohlen KN, Fingerhood
MI, Quintero L, White SA, McGinty EE: Studying how state health
services delivery policies can mitigate the effects of disasters on drug
addiction treatment and overdose: protocol for a mixed-methods study. PLoS One 16(12):e0261115, 2021.
Ferris LM, Saloner B, Jackson K, Lyons BC, Murthy
V, Kharrazi H, Latimore A, Stuart EA, Weiner JP: Performance of a predictive
model versus prescription-based thresholds in identifying patients at risk of
fatal opioid overdose. Subst Use Misuse
56(3):396-403, 2021.
Gianattasio KZ, Bennett EE, Wei J, Mehrotra ML, Mosley T,
Gottesman RF, Wong DF, Stuart EA, Griswold
ME, Couper D, Glymour MM, Power MC, Alzheimer's Disease Neuroimaging
Initiative: Generalizability
of findings from a clinical sample to a community-based sample: A comparison of
ADNI and ARIC. Alzheimers Dement
17(8):1265-1276, 2021.
Griffin BA, Schuler MS, Stuart EA, Patrick
S, McNeer E, Smart R, Powell D, Stei BD, Schell TL, Pacula RL: Moving beyond the classic
difference-in-differences model: a simulation study comparing statistical
methods for estimating effectiveness of state-level policies. BMC Med
Res Methodol 21(1):279, 2021.
Haber NA, Clarke-Deelder
E, Salomon JA, Feller A, Stuart EA: Impact evaluation of
coronavirus disease 2019 policy: a guide to common design issues. Am J
Epidemiol 190(11):2474-2486, 2021.
Kalb LG, Badillo-Goicoechea E, Holingue
C, Riehm KE, Thrul J, Stuart EA, Smail EJ, Law
K, White-Lehman C, Fallin D: Psychological
distress among caregivers raising a child with autism spectrum disorder during
the COVID-19 pandemic. Autism Res 14(10):2183-2188. 2021.
Kennedy-Hendricks A, Bandara S, Daumit
GL, Busch AB, Stone EM, Stuart EA, Murphy KA, McGinty EE: Behavioral health home impact
on transitional care and readmissions among adults with serious mental illness.
Health Serv Res 56(3):432-439, 2021.
Koenecke A, Powell M, Xiong R, Shen Z, Fischer N,
Huq S, Khalafallah AM, Trevisan M, Sparen P, Carrero
JJ, Nishimura A, Caffo B, Stuart EA, Bai R, Staedtke
V, Thomas DL, Papadopoulos N, Kinzler KW, Vogelstein B, Zhou S, Bettegowda C, Konig MF, Mensh BD, Vogelstein JT, Athey S: Alpha-1 adrenergic receptor
antagonists to prevent hyperinflammation and death from lower respiratory tract
infection. Elife 10:e61700, 2021.
Krawczyk N, Garrett B, Ahmad NJ, Patel E, Solomon
K, Stuart EA, Saloner B: Medications for opioid use
disorder among American Indians and Alaska natives: availability and use across
a national sample. Drug Alcohol Depend 220:108512, 2021.
Lee
Y, Nguyen
TQ, Stuart EA: Partially
pooled propensity score models for average treatment effect estimation with
multilevel data. JRSS-A 184(4):1578-1598, 2021.
Lessler
J, Grabowski MK, Grantz
KH, Badillo-Goicoechea E, Metcalf CJE, Lupton-Smith
C, Azman
AS, Stuart EA: Household
COVID-19 risk and in-person schooling. Science 372(6546):1092-1097,
2021.
McGinty EE, Murphy KA, Dalcin AT, Stuart EA,
Wang
NY, Dickerson F, Gudzune K, Jerome G, Thompson D,
Cullen BA, Gennusa J, Kilbourne AM, Daumit GL: A model for advancing scale-up
of complex interventions for vulnerable populations: the ALACRITY Center for
Health and Longevity in Mental Illness. J Gen Intern Med
36(2):500-505, 2021.
McGinty EE, Thompson D, Murphy KA, Stuart
EA, Wang
NY, Dalcin A, Mace E, Gennusa JV 3rd, Daumit GL: Adapting the Comprehensive
Unit Safety Program (CUSP) implementation strategy to increase delivery of
evidence-based cardiovascular risk factor care in community mental health
organizations: protocol for a pilot study. Implement Sci Commun 2(1):26, 2021.
McGinty EE, Tormohlen KN, Barry CL, Bicket MC, Rutkow L, Stuart EA: Protocol: mixed-methods study
of how implementation of US state medical cannabis laws affects treatment of
chronic non-cancer pain and adverse opioid outcomes. Implement Sci
16(1):2, 2021.
Oh ES, Rosenberg PB, Rattinger
GB, Stuart EA, Lyketsos CG, Leoutsakos
JS: Psychotropic medication
and cognitive, functional, and neuropsychiatric outcomes in Alzheimer's disease
(AD). J Am Geriatr Soc 69(4):955-963,
2021.
Patel E, Bandara S, Saloner B, Stuart EA,
Goodman D, Terplan M, McCourt A, White S, McGinty EE:
Heterogeneity in prenatal
substance use screening despite universal screening recommendations: findings
from the Pregnancy Risk Assessment Monitoring System, 2016-2018. Am J Obstet Gynecol 3(5):100419,
2021.
Powell M, Koenecke A, Byrd JB,
Nishimura A, Konig MF, Xiong R, Mahmood S, Mucaj V, Bettegowda
C, Rose L, Tamang S, Sacarny A, Caffo B, Athey S, Stuart
EA, Vogelstein JT: Ten
rules for conducting retrospective pharmacoepidemiological
analyses: example COVID-19 study. Front Pharmacol
12:700776, 2021.
Riehm KE, Brenneke SG, Adams LB, Gilan D, Lieb K,
Kunzler AM, Smail EJ, Holingue C, Stuart EA,
Kalb LG, Thrul J: Association between
psychological resilience and changes in mental distress during the COVID-19
pandemic. J Affect Disord 282:381-385,
2021.
Riehm KE, Holingue C,
Smail EJ, Kapteyn A, Bennett D, Thrul J, Kreuter F,
McGinty EE, Kalb LG, Veldhuis CB, Johnson RM, Fallin MD, Stuart EA: Trajectories of mental
distress among U.S. adults during the COVID-19 pandemic. Ann Behav Med 55(2):93-102, 2021.
Schuler MS, Griffin BA, Cerda M, McGinty EE, Stuart
EA: Methodological
challenges and proposed solutions for evaluating opioid policy effectiveness.
Health Serv Outcomes Res Methodol 21(1):21-41,
2021.
Seamans MJ, Hong H, Ackerman
B, Schmid I, Stuart EA: Generalizability of subgroup
effects. Epidemiology 32(3):389-392, 2021.
Solomon KT, Bandara S, Reynolds IS, Krawczyk N,
Saloner B, Stuart E, Connolly E: Association between
availability of medications for opioid use disorder in specialty treatment and
use of medications among patients: A state-level trends analysis. J Subst Abuse Treat 132:108424, 2021.
Stuart
EA, Dowdy DW: Evidence-based
COVID-19 policy-making in schools. Nat Med 27(12):2078-2079, 2021.
Tormohlen KN, Bicket MC, White S, Barry CL, Stuart
EA, Rutkow L, McGinty EE: The state of the evidence on
the association between state cannabis laws and opioid-related outcomes: a
review. Curr Addict Rep 8(4):538-545, 2021.
Tormohlen KN, Mojtabai R, Seiwell A, McGinty EE, Stuart
EA, Tobin KE, Troiani V: Co-occurring
opioid use and depressive disorders: patient characteristics and co-occurring
health conditions. J Dual Diagn
17(4):296-303, 2021.
Yan M, Sigurdson S, Greifer
N, Kennedy TAC, Toh TS, Lindsay PE, Weiss J, Hueniken K, Yeung C, Sugumar V,
Sun A, Bezjak A, Cho BCJ, Raman S, Hope AJ, Giuliani ME, Stuart EA, Owen
T, Ashworth A, Robinson A, de Moraes FY, Liu G, Lok BH: A comparison of hypofractionated and twice-daily thoracic irradiation in
limited-stage small-cell lung cancer: an overlap-weighted analysis. Cancers
13(12):2895, 2021.
Amoah J, Stuart EA, Cosgrove SE, Harris AD,
Han JH, Lautenbach E, Tamma PD: Comparing propensity score
methods versus traditional regression analysis for the evaluation of
observational data: a case study evaluating the treatment of gram-negative
bloodstream infections. Clin Infect Dis 71(9):e497-e505, 2020.
Bandara SN, Kennedy-Hendricks A, Stuart EA,
Barry CL, Abrams MT, Daumit GL, McGinty EE: The effects of the Maryland
Medicaid Health Home Waiver on Emergency Department and inpatient utilization
among individuals with serious mental illness. Gen Hosp Psychiatry
64:99-104, 2020.
Cowling K, Stuart EA, Neff RA, Vernick J,
Magraw D, Pollack Porter K: The relationship between
joining a US free trade agreement and processed food sales, 2002-2016: a
comparative interrupted time-series analysis. Public Health Nutr 23(9):1609-1617, 2020.
Dahabreh IJ,
Robertson SE, Steingrimsson
JA, Stuart EA, Hernan MA: Extending
inferences from a randomized trial to a new target population. Stat Med
39(14):1999-2014, 2020.
Dong N, Stuart EA, Lenis
D, Quynh
Nguyen T: Using
propensity score analysis of survey data to estimate population average
treatment effects: a case study comparing different methods. Eval Rev
44(1):84-108, 2020.
Feder KA, Ali MM, Sherman LJ, Letourneau E, Barry
CL, Stuart EA, Mutter R: Elevated prevalence of
antisocial behavior in adolescent children whose mothers misuse opioids. Drug
Alcohol Depend 215:108153, 2020.
Feder KA, Mojtabai R, Stuart EA, Musci R,
Letourneau EJ: Florida's
opioid crackdown and mortality from drug overdose, motor vehicle crashes, and
suicide: a Bayesian interrupted time-series analysis. Am J Epidemiol
189(9):885-893, 2020.
Flores JP, Swartz KL, Stuart EA, Wilcox HC: Co-occurring risk factors
among U.S. high school students at risk for suicidal thoughts and behaviors.
J Affect Disord 266:743-752, 2020.
Fox MP, Arah OA, Stuart EA: Commentary: The value of E-values and why
they are not enough. Int J Epidemiol 49(5):1505-1506, 2020.
French B, Stuart EA: Study designs and statistical methods
for studies of child and adolescent health policies. JAMA Pediatr 174(10):925-927, 2020.
Heyward J, Olson L, Sharfstein JM, Stuart
EA, Lurie P, Alexander GC: Evaluation
of the extended-release/long-acting opioid prescribing risk evaluation and
mitigation strategy program by the US Food and Drug Administration: a review.
JAMA Intern Med 180(2):301-309, 2020.
Holingue
C, Badillo-Goicoechea E, Riehm KE, Veldhuis CB, Thrul
J, Johnson RM, Fallin MD, Kreuter F, Stuart EA, Kalb LG: Mental distress during the
COVID-19 pandemic among US adults without a pre-existing mental health
condition: findings from American trend panel survey. Prev Med
139:106231, 2020.
Holingue
C, Kalb LG, Riehm KE, Bennett D, Kapteyn A, Veldhuis CB, Johnson RM, Fallin MD,
Kreuter F, Stuart EA, Thrul J: Mental distress in the United
States at the beginning of the COVID-19 pandemic. Am J Public Health
110(11):1628-1634, 2020.
Krawczyk N, Mojtabai R, Stuart EA, Fingerhood M, Agus D, Lyons BC, Weiner JP, Saloner B: Opioid agonist treatment and
fatal overdose risk in a state-wide US population receiving opioid use disorder
services. Addiction 115(9):1683-1694, 2020.
Krawczyk N, Schneider KE, Eisenberg MD, Richards
TM, Ferris L, Mojtabai R, Stuart EA, Casey Lyons B, Jackson K, Weiner
JP, Saloner B: Opioid
overdose death following criminal justice involvement: Linking statewide
corrections and hospital databases to detect individuals at highest risk. Drug
Alcohol Depend 213:107997, 2020.
McCourt AD, Crifasi CK, Stuart EA, Vernick
JS, Kagawa RMC, Wintemute GJ, Webster DW: Purchaser licensing,
point-of-sale background check laws, and firearm homicide and suicide in 4 US
states, 1985-2017. Am J Public Health 110(10):1546-1552, 2020.
McGinty EE, Stone EM, Kennedy-Hendricks A, Bandara
S, Murphy KA, Stuart EA, Rosenblum MA, Daumit
GL: Effects of Maryland's
Affordable Care Act Medicaid health home waiver on quality of cardiovascular
care among people with serious mental illness. J Gen Intern Med
35(11):3148-3158, 2020.
Mendelson T, Clary LK, Sibinga
E, Tandon D, Musci R, Mmari K, Salkever
D, Stuart EA, Ialongo N: A randomized controlled
trial of a trauma-informed school prevention program for urban youth:
Rationale, design, and methods. Contemp Clin Trials 90:105895, 2020.
Murphy KA, Daumit GL,
Bandara SN, Stone EM, Kennedy-Hendricks A, Stuart EA, Pollack CE,
McGinty EE: Association
between the Maryland Medicaid behavioral health home program and cancer
screening in people with serious mental illness. Psychiatr
Serv 71(6):608-611, 2020.
Nguyen
TQ, Stuart EA: Propensity
score analysis with latent covariates: measurement error bias correction using
the covariate's posterior mean, aka the inclusive factor score. J Educ Behav Stat 45(5):598-636, 2020.
Pittman
A, Stuart EA, Siddique J: Characterizing measurement
error in dietary sodium in longitudinal intervention studies. Front Nutr 7:581439, 2020.
Rathbun AM, Schuler MS, Stuart EA, Shardell
MD, Yau MS, Gallo JJ, Ryan AS, Hochberg MC: Depression subtypes in
individuals with or at risk for symptomatic knee osteoarthritis. Arthritis
Care Res 72(5):669-678, 2020.
Rathbun AM, Shardell
MD, Ryan AS, Yau MS, Gallo JJ, Schuler MS, Stuart EA, Hochberg MC: Association between disease
progression and depression onset in persons with radiographic knee
osteoarthritis. Rheumatology 59(11):3390-3399, 2020.
Riehm KE, Holingue C,
Kalb LG, Bennett D, Kapteyn A, Jiang Q, Veldhuis CB, Johnson RM, Fallin MD,
Kreuter F, Stuart EA, Thrul J: Associations between media
exposure and mental distress among U.S. adults at the beginning of the COVID-19
pandemic. Am J Prev Med 59(5):630-638, 2020.
Rudolph
KE, Goin DE, Stuart EA: The peril of power: a tutorial
on using simulation to better understand when and how we can estimate mediating
effects. Am J Epidemiol 189(12):1559-1567, 2020.
Rudolph
KE, Levy J, Schmidt NM, Stuart EA, Ahern J: Using
transportability to understand differences in mediation mechanisms across trial
sites of a housing voucher experiment. Epidemiology 31(4):523-533,
2020.
Samples H, Stuart EA, Saloner B, Barry CL,
Mojtabai R: The role of
screening in depression diagnosis and treatment in a representative sample of
US primary care visits. J Gen Intern Med 35(1):12-20, 2020.
Schuler MS, Heins SE, Smart R, Griffin BA, Powell
D, Stuart EA, Pardo B, Smucker S, Patrick SW, Pacula RL, Stein BD: The state of the science in
opioid policy research. Drug Alcohol Depend 214:108137, 2020.
Stuart
EA, Lesko CR: The promise, and
challenges, of methods to enhance the external validity of randomized trial
results. Clin Pharmacol Ther
108(6):1132-1134, 2020.
Wang L, Motter J, Bae
S, Ahn JB, Kanakry JA, Jackson J, Schnitzler MA, Hess
G, Lentine KL, Stuart EA, Segev
DL, McAdams-DeMarco M: Induction
immunosuppression and the risk of incident malignancies among older and younger
kidney transplant recipients: A prospective cohort study. Clin
Transplant 34(12):e14121, 2020.
Ackerman
B, Schmid I, Rudolph
KE, Seamans MJ, Susukida R, Mojtabai R, Stuart EA: Implementing statistical
methods for generalizing randomized trial findings to a target population. Addict Behav
94:124-132, 2019.
Cowling K, Stuart
EA, Neff RA, Magraw D, Vernick J, Porter KP: World Trade Organization
membership and changes in noncommunicable disease risk factors: a comparative
interrupted time-series analysis, 1980-2013. Bull World Health Organ 97(2):83-96A, 2019.
Dahabreh
IJ, Robertson SE, Tchetgen EJ, Stuart EA, Hernan MA: Generalizing causal
inferences from individuals in randomized trials to all trial-eligible
individuals. Biometrics
75(2):685-694, 2019.
Goldstein BA, Phelan M, Pagidipati
NJ, Holman RR, Pencina MJ, Stuart EA: An
outcome model approach to transporting a randomized controlled trial results to
a target population. J Am Med Inform
Assoc 26(5):429-437, 2019.
Hong H, Aaby DA, Siddique J, Stuart EA: Propensity
score-based estimators with multiple error-prone covariates. Am J Epidemiol 188(1):222-230, 2019.
Kalb LG, Stuart
EA, Vasa RA: Characteristics
of psychiatric emergency department use among privately insured adolescents
with autism spectrum disorder. Autism
23(3):566-573, 2019.
Knapp EA, Bennett WL, Wilson RF, Zhang A, Tseng E,
Cheskin LJ, Bass EB, Kharrazi H, Stuart
EA: Methods and risks of
bias in natural experiments in obesity: opportunities for the future informed
by a systematic review. Obesity
27(12):1950-1957, 2019.
Kohler U, Kreuter F, Stuart EA: Nonprobability
sampling and causal analysis. Annu
Rev Stat Appl 6:149-172, 2019.
Lenis
D, Nguyen
TQ, Dong N, Stuart EA: It's all about balance: propensity
score matching in the context of complex survey data. Biostatistics 20(1):147-163, 2019.
Li P, Stuart
EA: Best (but
oft-forgotten) practices: missing data methods in randomized controlled
nutrition trials. Am J Clin Nutr 109(3):504-508, 2019.
Mayo-Wilson E, Fusco N, Li T, Hong H, Canner JK,
Dickersin K, MUDS investigators (includes Stuart
E): Harms are assessed
inconsistently and reported inadequately part 1: systematic adverse events.
J Clin Epidemiol 113:20-27, 2019.
Mayo-Wilson E, Fusco N, Li T, Hong H, Canner JK,
Dickersin K, MUDS investigators (includes Stuart
E): Harms are assessed
inconsistently and reported inadequately Part 2: nonsystematic adverse events.
J Clin Epidemiol 113:11-19, 2019.
McDonald EM, Davani A, Price A, Mahoney P, Shields
W, Musci RJ, Solomon BS, Stuart EA,
Gielen AC: Health
education intervention promoting infant safe sleep in paediatric
primary care: randomised controlled trial. Inj Prev 25(3):146-151, 2019.
Musci RJ, Stuart
E: Ensuring causal, not
casual, inference. Prev Sci 20(3):452-456,
2019.
Nguyen
TQ, Ebnesajjad C, Stuart EA, Kennedy RD, Johnson RM: Does marijuana use at ages
16-18 predict initiation of daily cigarette smoking in late adolescence and
early adulthood? a propensity score analysis of Add Health data. Prev Sci 20(2):246-256, 2019.
Parekh J, Stuart
E, Blum R, Caldas V, Whitfield B, Jennings JM: Addressing the
adherence-adaptation debate: lessons from the replication of an evidence-based
sexual health program in school settings. Prev Sci 20(7):1074-1088, 2019.
Raghavan R, Fallin MD, Hong X, Wang G, Ji Y, Stuart EA, Paige D, Wang X: Cord and early childhood
plasma adiponectin levels and autism risk: a prospective birth cohort study.
J Autism Dev Disord
49(1):173-184, 2019.
Resnick BA, Morlock L, Diener-West M, Stuart EA, Spencer M, Sharfstein JM: PH WINS and the future of
public health education. J Public
Health Manag Pract
25(Suppl 2):S10-S12, 2019.
Rosenblum MA, Miller P, Reist B, Stuart EA, Thieme M, Louis TA: Adaptive
design in surveys and clinical trials: similarities, differences and
opportunities for cross‐fertilization. JRSS-A 182(3):963-982, 2019.
Rudolph
KE, Goin DE, Paksarian D, Crowder R, Merikangas KR, Stuart EA: Causal mediation analysis
with observational data: considerations and illustration examining mechanisms
linking neighborhood poverty to adolescent substance use. Am J Epidemiol 188(3):598-608, 2019.
Samples H, Stuart
EA, Olfson M: Opioid use and misuse and
suicidal behaviors in a nationally representative sample of US adults. Am J Epidemiol 188(7):1245-1253, 2019.
Sharifi V, Shahrivar Z, Zarafshan H, Ashkezary SB, Stuart
E, Mojtabai R, Wissow L: Collaborative care for
child and youth mental health problems in a middle-income country: study
protocol for a randomized controlled trial training general practitioners. Trials 20(1):405, 2019.
Shelley KD, Mpembeni R, Frumence G, Stuart
EA, Killewo J, Baqui AH, Peters DH: Integrating community
health worker roles to improve facility delivery utilization in Tanzania:
evidence from an interrupted time series analysis. Matern Child Health J 23(10):1327-1338, 2019.
Siddique J, Daniels MJ, Carroll RJ, Raghunathan TE,
Stuart EA, Freedman LS: Measurement error
correction and sensitivity analysis in longitudinal dietary intervention
studies using an external validation study. Biometrics 75(3):927-937, 2019.
Stern HS, Blower D, Cohen ML, Czeisler CA, Dinges
DF, Greenhouse JB, Guo F, Hanowski RJ, Hartenbaum NP,
Krueger GP, Mallis MM, Pain RF, Rizzo M, Sinha E, Small DS, Stuart EA, Wegman DH: Data and methods for
studying commercial motor vehicle driver fatigue, highway safety and long-term
driver health. Accid Anal Prev 126:37-42, 2019.
Townsend L, Musci R, Stuart E, Heley K, Beaudry MB, Schweizer B, Ruble A, Swartz K,
Wilcox H: Gender
differences in depression literacy and stigma after a randomized controlled
evaluation of a universal depression education program. J Adolesc Health
64(4):472-477, 2019.
Westreich D, Edwards JK, Lesko CR, Cole SR, Stuart EA: Target validity and the
hierarchy of study designs. Am J
Epidemiol 188(2):438-443, 2019.
Elizabeth
Sugar (go
to top of document)
Blake KV, Antal H, Bunnell HT, He J, Henderson R,
Holbrook JT, McCahan SM, Pennington C, Rogers L, Shade D, Sugar EA,
Taylor A, Wise RA, Wysocki T: Comprehension by caregivers
and adolescents of clinical trial information delivered via multimedia video
versus conventional practice: nonrandomized controlled trial. JMIR Pediatr Parent 6:e44252, 2023.
Cassard SD, Fitzgerald KC, Qian P, Emrich SA,
Azevedo CJ, Goodman AD, Sugar EA, Pelletier D, Waubant
E, Mowry EM: High-dose
vitamin D3 supplementation in relapsing-remitting multiple sclerosis: a randomised clinical trial. EClinicalMedicine
59:101957, 2023.
Jabs DA, Sugar EA, Burke AE, Altaweel MM, Dunn JP, Gangaputra
S, Kempen
JH, Pepple KL, Stawell RJ, Holbrook JT, Multicenter
Uveitis Steroid Treatment (MUST) Trial and Follow-up Study Research Group: Cataract surgery in patients
with uveitis treated with systemic therapy in the Multicenter Uveitis Steroid
Treatment (MUST) Trial and Follow-up Study: Risk factors and outcomes. Am
J Ophthalmol 254:210-220, 2023.
Kaminsky DA, He J, Henderson R, Dixon AE, Irvin CG,
Mastronarde J, Smith LJ, Sugar EA, Wise RA,
Holbrook JT: Bronchodilator
response does not associate with asthma control or symptom burden among
patients with poorly controlled asthma. Respir Med 218:107375, 2023.
Multicenter Uveitis Steroid Treatment Trial (MUST)
Research Group, Writing Committee: Acharya NR, Vitale AT, Sugar EA,
Holbrook JT, Burke AE, Thorne JE, Altaweel MM, Kempen JH,
Jabs DA: Intravitreal
therapy for uveitic macular edema-ranibizumab versus
methotrexate versus the dexamethasone implant: the MERIT Trial results. Ophthalmology
130(9):914-923, 2023.
Synn AJ, Menson KE, Carnethon
MR, Kalhan R, Sugar EA, Washko GR, Wise RA, Eakin MN: "It's a cause I believe
in": factors motivating participation and engagement in longitudinal,
respiratory-focused research studies. BMC Pulm
Med 23(1):285, 2023.
Taraborelli D, Thomas JJ, Kim L, Fashina T, Hayek B, Mattia JG, Vandy M, Sugar E,
Crozier I, Yeh S, Shantha JG: Visual acuity and
vision-related quality of life outcomes following cataract surgery in Ebola
virus disease survivors. Glob J Cataract Surg Res Ophthalmol
2(2):23-29, 2023.
Heumann TR, Baretti M, Sugar
EA, Durham JN, Linden S, Lopez-Vidal TY, Leatherman J, Cope L, Sharma A, Weekes
CD, O'Dwyer PJ, Reiss KA, Monga DK, Ahuja N, Azad NS: A randomized, phase II trial
of oral azacitidine (CC-486) in patients with resected pancreatic
adenocarcinoma at high risk for recurrence. Clin Epigenetics
14(1):166, 2022.
Jabs DA, Berkenstock MK, Altaweel
MM, Holbrook JT, Sugar EA, ADVISE Research Group: The conundrum of clinical
trials for the uveitides: appropriate outcome
measures for one treatment used in several diseases. Epidemiol Rev
44(1):2-16, 2022.
Askenase
MH, Goods BA, Beatty HE, Steinschneider AF, ..., Thompson RE, ..., ICHseq Investigators MISTIE III Investigators (includes Sugar
E): Longitudinal
transcriptomics define the stages of myeloid activation in the living human
brain after intracerebral hemorrhage. Sci Immunol 6(56):eabd6279,
2021.
Ho WJ, Zhu Q, Durham J, Popovic A, ..., Stein-O'Brien
G, Sugar EA, et al: Neoadjuvant
cabozantinib and nivolumab converts locally advanced
HCC into resectable disease with enhanced antitumor
immunity. Nat Cancer 2(9):891-903, 2021.
Reyfman PA,
Sugar E, Hazucha H, Hixon J, Reynolds C, Bose S, Dransfield MT, Han MK, Estepar RSJ, Rice MB, Washko GR, Carnethon
M, Kalhan R, American Lung Association Airways Clinical Research Network,
American Lung Association Airway's Clinical Research Network: Study protocol for a national
cohort of adults focused on respiratory health: the American Lung Association
Lung Health Cohort (ALA-LHC) Study. BMJ Open 11(7):e053342, 2021.
Rosenthal ES, Elm JJ, Ingles J, ..., Established Status
Epilepticus Treatment Trial Study Group (includes Sugar E): Early neurologic recovery,
practice pattern variation, and the risk of endotracheal intubation following
established status epilepticus. Neurology 96(19):e2372-e2386, 2021.
Tomkins-Netzer
O, Lightman SL, Burke AE, Sugar EA, Lim LL, Jaffe GJ, Altaweel MM, Kempen
JH,
Holbrook JT, Jabs DA, Multicenter Steroid Treatment Trial and Follow-up Study
Research Group: Seven-year
outcomes of uveitic macular edema: the Multicenter
Uveitis Steroid Treatment Trial and Follow-up Study results. Ophthalmology
128(5):719-728, 2021.
Yohannes AM, N Eakin M, Holbrook JT, Sugar
EA, Henderson R, Baker AM, Casper AS, Kaminsky DA, Rea AL, Mathews AM, Que LG,
Ramsdell JW, Gerald LB, Wise RA, Hanania NA: Association of mild cognitive
impairment and characteristic of COPD and overall health status in a cohort
study. Expert Rev Respir Med 15(1):153-159, 2021.
Zheng L, Ding D, Edil BH, Judkins C, ..., Sugar
E, et al: Vaccine-induced intratumoral lymphoid aggregates correlate with survival
following treatment with a neoadjuvant and adjuvant vaccine in patients with resectable pancreatic adenocarcinoma. Clin Cancer
Res 27(5):1278-1286, 2021.
Bose S, Bime C, Henderson
RJ, Blake KV, Castro M, DiMango E, Hanania NA, Holbrook JT, Irvin CG, Kraft M,
Peters SP, Reibman J, Sugar EA, Sumino K, Wise RA, Rogers L, American
Lung Association Airways Clinical Research Centers: Biomarkers of type 2 airway
inflammation as predictors of loss of asthma control during step-down therapy
for well-controlled disease: the Long-Acting Beta-Agonist Step-Down Study
(LASST). J Allergy Clin Immunol Pract
8(10):3474-3481, 2020.
De Jesus-Acosta A, Sugar EA, O'Dwyer PJ,
Ramanathan RK, Von Hoff DD, Rasheed Z, Zheng L, Begum A, Anders R, Maitra A,
McAllister F, Rajeshkumar NV, Yabuuchi S, de Wilde
RF, Batukbhai B, Sahin I, Laheru
DA: Phase 2 study of vismodegib, a hedgehog inhibitor, combined with gemcitabine
and nab-paclitaxel in patients with untreated metastatic pancreatic
adenocarcinoma. Br J Cancer 122(4):498-505, 2020.
Kempen
JH, Van
Natta ML, Friedman DS, Altaweel MM, Ansari H,
Dunn JP, Elner SG, Holbrook JT, Lim LL, Sugar EA, Jabs DA, Multicenter
Uveitis Steroid Treatment (MUST) Trial and Follow-up Study Research Group: Incidence and outcome of uveitic glaucoma in eyes with intermediate, posterior, or panuveitis
followed up to 10 years after randomization to fluocinolone acetonide implant
or systemic therapy. Am J Ophthalmol 219:303-316, 2020.
Sugar
EA, Burke AE, Venugopal
V, Thorne JE, Holbrook JT, Multicenter Uveitis Steroid Treatment Trial and
Follow-up Study Research Group: Responsiveness of
vision-specific and general quality of life metrics to ocular and systemic
events in patients with uveitis. Ophthalmology 127(12):1710-1718,
2020.
Tsujikawa
T, Crocenzi T, Durham JN, Sugar EA, et al: Evaluation of
cyclophosphamide/GVAX pancreas followed by listeria-mesothelin (CRS-207) with
or without nivolumab in patients with pancreatic cancer. Clin Cancer Res
26(14):3578-3588, 2020.
Wu AA, Bever KM, Ho WJ, Fertig EJ, Niu N, Zheng L,
Parkinson RM, Durham JN, Onners B, Ferguson AK, Wilt
C, Ko AH, Wang-Gillam A, Laheru DA, Anders RA,
Thompson ED, Sugar EA, Jaffee EM, Le DT: A phase II study of allogeneic
GM-CSF-transfected pancreatic tumor vaccine (GVAX) with ipilimumab as
maintenance treatment for metastatic pancreatic cancer. Clin Cancer Res
26(19):5129-5139, 2020.
Hanley DF, Thompson RE, Rosenblum M, Yenokyan G,
..., Betz JF, Sugar EA, et al: Efficacy and safety of
minimally invasive surgery with thrombolysis in intracerebral haemorrhage evacuation (MISTIE III): a randomised,
controlled, open-label, blinded endpoint phase 3 trial. Lancet 393(10175):1021-1032, 2019.
Kaminsky DA, Chapman DG, Holbrook JT, Henderson RJ,
Sugar EA, Mastronarde
J, Teague WG, Busk M, Sumino K, Dixon AE, Wise RA, Irvin CG: Older age and obesity are
associated with increased airway closure in response to methacholine in
patients with asthma. Respirology
24(7):638-645, 2019.
Thorne JE, Sugar
EA, Holbrook JT, Burke AE, Altaweel MM, Vitale AT,
Acharya NR, Kempen
JH, Jabs DA, Multicenter Uveitis Steroid Treatment Trial Research Group: Periocular triamcinolone
vs. intravitreal triamcinolone vs. intravitreal dexamethasone implant for the
treatment of uveitic macular edema: The PeriOcular vs. INTravitreal
corticosteroids for uveitic macular edema (POINT)
Trial. Ophthalmology
126(2):283-295, 2019.
Margaret
Taub (go
to top of document)
Awotoye
W, Mossey PA, Hetmanski JB, Gowans LJJ, ..., Taub
M, et al: Damaging
mutations in AFDN contribute to risk of nonsyndromic
cleft lip with or without cleft palate. Cleft Palate Craniofacial J
61(4):697-705, 2024.
Keener R, Chhetri SB, Connelly CJ, Taub MA,
..., Ruczinski I, et al: Validation
of human telomere length multi-ancestry meta-analysis association signals
identifies POP5 and KBTBD6 as human telomere length regulation genes. Nat
Commun 15(1):4417, 2024.
Leroux
A, Crainiceanu C, Zeger S, Taub M, Ansari B, Wager TD, Bayman E, Coffey
C, Langefeld C, McCarthy R, Tsodikov A, Brummet C, Clauw DJ, Edwards RR, Lindquist MA, A2CPS Consortium: Statistical modeling of acute
and chronic pain patient-reported outcomes obtained from ecological momentary
assessment. Pain 165(9):1955-1965, 2024.
Pershad Y, Mack T, Poisner
H, ..., Taub MA, et al: Determinants of mosaic
chromosomal alteration fitness. Nat Commun
15(1):3800, 2024.
Rocheleau G, Clarke SL, Auguste G, Hasbani NR, ...,
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Taub
M), et al: Rare variant
contribution to the heritability of coronary artery disease. Nat Commun 15(1):8741, 2024.
Szczesny B, Boorgula MP,
Chavan S, Campbell M, Johnson RK, Kammers
K, ..., Ruczinski I, ..., Taub MA, et al: Multi-omics in nasal
epithelium reveals three axes of dysregulation for asthma risk in the African
Diaspora populations. Nat Commun
15(1):4546, 2024.
Wright C, Meng
Q, Breshock MR, Atta L, Taub MA, Jager LR, Muschelli
J, Hicks SC: Open
case studies: statistics and data science education through real-world
applications. J Stat Data Sci Educ 32(4):331-344, 2024.
Jakubek YA, Zhou Y, Stilp A, Bacon J, Wong JW, ...,
Taub M, et al: Mosaic
chromosomal alterations in blood across ancestries using whole-genome
sequencing. Nat Genet 55(11):1912-1919, 2023.
Kim JS, Manichaikul AW, Hoffman EA, ..., Taub MA, et al:
MUC5B, telomere length and longitudinal quantitative
interstitial lung changes: the MESA Lung Study. Thorax
78(6):566-573, 2023.
Li X, Quick C, Zhou H, Gaynor SM, ..., NHLBI
Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Taub M),
et al: Powerful, scalable
and resource-efficient meta-analysis of rare variant associations in large
whole genome sequencing studies. Nat Genet 55(1):154-164, 2023.
Lynch MT, Taub MA, Farfel JM, Yang J, Abadir
P, De Jager PL, Grodstein F, Bennett DA, Mathias RA: Evaluating genomic signatures
of aging in brain tissue as it relates to Alzheimer's disease. Sci Rep 13(1):14747,
2023.
Oladayo A, Gowans LJJ, Awotoye
W, Alade A, ..., Taub M, et al: Clinically actionable
secondary findings in 130 triads from sub-Saharan African families with
non-syndromic orofacial clefts. Mol Genet Genomic Med 11(10):e2237,
2023.
Recto K, Kachroo P, Huan
T, Van Den Berg D, Lee GY, Bui H, Lee DH, Gereige J,
Yao C, Hwang SJ, Joehanes R, Weiss ST; NHLBI
Trans-Omics in Precision Medicine (TOPMed) Consortium (includes Taub M),
O'Connor GT, Levy D, DeMeo D: Epigenome-wide DNA methylation
association study of circulating IgE levels
identifies novel targets for asthma. EBioMedicine
95:104758, 2023.
Schuermans A, Nakao T, Uddin MM, Hornsby W, Ganesh S, Shadyab
AH, Liu S, Haring B, Shufelt CL, Taub MA, Mathias RA, Kooperberg C, Reiner AP, Bick AG, Manson JE, Natarajan P, Honigberg MC: Age at menopause, leukocyte
telomere length, and coronary artery disease in postmenopausal women. Circ
Res 133(5):376-386, 2023.
Weinstock JS, Gopakumar J, Burugula
BB, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes
Taub M), et al: Aberrant
activation of TCL1A promotes stem cell expansion in clonal haematopoiesis.
Nature 616(7958):755-763, 2023.
Wong WJ, Emdin C, Bick
AG, ..., NHLBI TOPMed Hematology Working Group (includes Taub M), et al:
Clonal haematopoiesis
and risk of chronic liver disease. Nature 616(7958):747-754, 2023.
Awotoye
W, Mossey PA, Hetmanski JB, Gowans LJJ, Eshete MA,
Adeyemo WL, Alade A, Zeng E, ..., Taub M, et al: Whole-genome sequencing
reveals de-novo mutations associated with nonsyndromic
cleft lip/palate. Sci Rep 12(1):11743, 2022.
Berardi G, Frey-Law L, ..., Lindquist M, Caffo BS,
Crainiceanu C, Zeger S, ..., Taub M, et al: Multi-site observational study
to assess biomarkers for susceptibility or resilience to chronic pain: The
Acute to Chronic Pain Signatures (A2CPS) study protocol. Front Med
9:849214, 2022.
Johnson RK, Brunetti T, Quinn
K, Doenges K, Campbell M, Arehart C, Taub MA, Mathias RA, Reisdorph N,
Barnes KC, Daya M: Discovering
metabolite quantitative trait loci in asthma using an isolated population. J
Allergy Clin Immunol 149(5):1807-1811, 2022.
Katz DH, Tahir UA, Bick AG, Pampana A, ..., National Heart, Lung, and Blood Institute
TOPMed (Trans-Omics for Precision Medicine) Consortium (includes Taub
M): Whole genome sequence
analysis of the plasma proteome in black adults provides novel insights into
cardiovascular disease. Circulation 145(5):357-370, 2022.
Li Z, Li X, Zhou H, ..., Taub
MA, ..., et al: A framework
for detecting noncoding rare-variant associations of large-scale whole-genome
sequencing studies. Nat Methods 19(12):1599-1611, 2022.
Nakao T, Bick AG, Taub
MA, et al: Mendelian
randomization supports bidirectional causality between telomere length and
clonal hematopoiesis of indeterminate potential. Sci Adv
8(14):eabl6579, 2022.
Ngwa
JS, Yanek LR, Kammers
K, Kanchan K, Taub MA, Scharpf
RB, Faraday N, Becker LC, Mathias RA, Ruczinski I: Secondary analyses for
genome-wide association studies using expression quantitative trait loci. Genet
Epidemiol 46(3-4):170-181, 2022.
Ray D, Vergara C, Taub
MA, Wojcik G, Ladd-Acosta C, Beaty TH, Duggal P: Benchmarking statistical
methods for analyzing parent-child dyads in genetic association studies. Genet
Epidemiol 46(5-6):266-284, 2022.
Selvaraj MS, Li X, Li Z, ...,
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Taub
M), et al: Whole genome
sequence analysis of blood lipid levels in >66,000 individuals. Nat Commun 13(1):5995, 2022.
Tahir UA, Katz DH, Avila-Pachecho J, ..., NHLBI Trans-Omics for Precision Medicine 1
Consortium (includes Taub M), et al: Whole genome association study
of the plasma metabolome identifies metabolites linked to cardiometabolic
disease in black individuals. Nat Commun
13(1):4923, 2022.
Taub MA, Conomos MP, Keener
R, Iyer KR, et al: Genetic
determinants of telomere length from 109,122 ancestrally diverse whole-genome
sequences in TOPMed. Cell Genom 2(1):100084, 2022.
Wainschtein P, Jain D, Zheng Z, TOPMed Anthropometry Working
Group, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Taub
M), et al: Assessing the
contribution of rare variants to complex trait heritability from whole-genome
sequence data. Nat Genet 54(3):263-273, 2022.
Washington C 3rd, Dapas M, Biddanda A, Magnaye KM, Aneas I, Helling BA, Szczesny B, Boorgula MP, Taub MA, et al: African-specific alleles
modify risk for asthma at the 17q12-q21 locus in African Americans. Genome
Med 14(1):112, 2022.
Cade BE, Lee J, Sofer T, Wang H, Zhang M, Chen H,
Gharib SA, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
(includes Taub M), et al: Whole-genome association
analyses of sleep-disordered breathing phenotypes in the NHLBI TOPMed program.
Genome Med 13(1):136, 2021.
Kammers
K, Taub MA, Mathias RA, Yanek LR, Kanchan K, Venkatraman V, Sundararaman
N, Martin J, Liu S, Hoyle D, Raedschelders K,
Holewinski R, Parker S, Dardov V, Faraday N, Becker
DM, Cheng L, Wang ZZ, Leek JT, Van Eyk JE, Becker LC:
Gene and protein expression
in human megakaryocytes derived from induced pluripotent stem cells. J Thromb Haemost
19(7):1783-1799, 2021.
Kammers
K, Taub MA, Rodriguez B, Yanek LR, Ruczinski I, Martin J, Kanchan K,
Battle A, Cheng L, Wang ZZ, Johnson AD, Leek JT, Faraday N, Becker LC, Mathias
RA: Transcriptional profile
of platelets and iPSC-derived megakaryocytes from whole-genome and RNA
sequencing. Blood 137(7):959-968, 2021.
Kasela
S, Ortega VE, Martorella M, ..., NHLBI Trans-Omics for Precision Medicine
(TOPMed) Consortium (includes Taub M), et al: Genetic and non-genetic
factors affecting the expression of COVID-19-relevant genes in the large airway
epithelium. Genome Med 13(1):66, 2021.
Keramati
AR, Chen MH, Rodriguez BAT, ..., Ruczinski I, ..., Taub MA, et al: Genome sequencing unveils
a regulatory landscape of platelet reactivity. Nat Commun
12(1):3626, 2021.
Luo Y, Kanai M, Choi W, ..., NHLBI Trans-Omics for
Precision Medicine (TOPMed) Consortium (includes Taub M), et al: A high-resolution HLA
reference panel capturing global population diversity enables multi-ancestry
fine-mapping in HIV host response. Nat Genet 53(10):1504-1516, 2021.
Natarajan P, Pampana A,
Graham SE, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
(includes Taub M), et al: Chromosome Xq23 is associated
with lower atherogenic lipid concentrations and favorable cardiometabolic
indices. Nat Commun 12(1):2182, 2021.
Ray D, Venkataraghavan S, Zhang W, Leslie EJ, Hetmanski JB, Weinberg SM, Murray JC, Marazita ML,
Ruczinski I, Taub MA, Beaty TH: Pleiotropy method reveals
genetic overlap between orofacial clefts at multiple novel loci from GWAS of
multi-ethnic trios. PLoS Genet
17(7):e1009584, 2021.
Reiner AP, Raffield LM, Franceschini N,
Auer PL, Lange EM, Nickerson DA, Zakai NA, Correa A, Olson N, National Heart,
Lung, and Blood Institute Trans-Omics for Precision Medicine Consortium
(includes Taub M): Effect
of sickle cell trait and APOL1 genotype on the association of soluble uPAR with kidney function measures in black Americans. Clin
J Am Soc Nephrol 16(2):287-289, 2021.
Sofer T, Zheng X, Laurie CA, ..., NHLBI Trans-Omics
for Precision Medicine (TOPMed) Consortium (includes Taub M), et al: Variant-specific inflation
factors for assessing population stratification at the phenotypic variance
level. Nat Commun 12(1):3506, 2021.
Taliun D, Harris DN, Kessler MD, ...,
Ruczinski I, ..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
(includes Taub M), et al: Sequencing of 53,831 diverse
genomes from the NHLBI TOPMed Program. Nature 590(7845):290-299,
2021.
Vergara C, Valencia A, Thio CL, ..., Taub M,
et al: A multiancestry sex-stratified genome-wide association study
of spontaneous clearance of hepatitis C virus. J Infect Dis
223(12):2090-2098, 2021.
Zhang W, Venkataraghavan S, Hetmanski
JB, Leslie EJ, Marazita ML, Feingold E, Weinberg SM, Ruczinski I, Taub
MA, Scott AF, Ray D, Beaty TH: Detecting gene-environment
interaction for maternal exposures using case-parent trios ascertained through
a case with non-syndromic orofacial cleft. Front Cell Dev Biol
9:621018, 2021.
Bick AG, Weinstock JS, Nandakumar SK,
..., Taub MA, et al: Inherited
causes of clonal haematopoiesis in 97,691 whole
genomes. Nature 586(7831):763-768, 2020.
Bishop MR, Diaz Perez KK, Sun M, Ho S,
Chopra P, Mukhopadhyay N, Hetmanski JB, Taub
MA, ..., Ruczinski I, et al: Genome-wide
enrichment of de novo coding mutations in orofacial cleft trios. Am J
Hum Genet 107(1):124-136, 2020.
Kanchan K, Iyer K, Yanek LR,
Carcamo-Orive I, Taub MA, ..., Ruczinski I, et al: Genomic integrity of human
induced pluripotent stem cells across nine studies in the NHLBI NextGen program.
Stem Cell Res 46:101803, 2020.
Kessler MD, Loesch DP, Perry JA, ...,
TOPMed Population Genetics Working Group (includes Taub M), et al: De novo mutations across
1,465 diverse genomes reveal mutational insights and reductions in the Amish
founder population. Proc Natl Acad Sci U S A
117(5):2560-2569, 2020.
Li X, Li Z, Zhou H, Gaynor SM, Liu Y,
..., NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium (includes Taub
M), et al: Dynamic
incorporation of multiple in silico functional annotations empowers rare
variant association analysis of large whole-genome sequencing studies at scale.
Nat Genet 52(9):969-983, 2020.
Mukhopadhyay N, Bishop M, Mortillo M, Chopra P, Hetmanski
JB, Taub MA, Moreno LM, Valencia-Ramirez LC, Restrepo C, Wehby GL, Hecht
JT, Deleyiannis F, Butali
A, Weinberg SM, Beaty TH, Murray JC, Leslie EJ, Feingold E, Marazita ML: Whole genome sequencing of
orofacial cleft trios from the Gabriella Miller Kids First Pediatric Research
Consortium identifies a new locus on chromosome 21. Hum Genet
139(2):215-226, 2020.
Vergara C, Duggal P, Thio CL, Valencia
A, Brien TRO, Latanich R, Timp W, Johnson EO, Kral
AH, Mangia A, Goedert JJ, Piazzola V, Mehta SH, Kirk GD, Peters MG, Donfield
SM, Edlin BR, Busch MP, Alexander G, Murphy EL, Kim AY, Lauer GM, Chung RT,
Cramp ME, Cox AL, Khakoo SI, Rosen HR, Alric L,
Wheelan SJ, Wojcik GL, Thomas DL, Taub MA: Multi-ancestry fine mapping of
interferon lambda and the outcome of acute hepatitis C virus infection. Genes
Immun 21(5):348-359, 2020.
Vince N, Limou
S, Daya M, ..., Ruczinski I, ..., Taub M, et al: Association of HLA-DRB1∗09:01
with tIgE levels among African-ancestry individuals
with asthma. J Allergy Clin Immunol 146(1):147-155, 2020.
Boorgula MP, Taub MA, Rafaels N, Daya M, Campbell M, Chavan S, Shetty A, Cheadle
C, Barkataki S, Fan J, David G, Beaty TH, Ruczinski
I, Hanifin J, Schneider LC, Gallo RL, Paller AS, Beck LA, Leung DY, Mathias RA,
Barnes KC: Replicated
methylation changes associated with eczema herpeticum and allergic response.
Clin Epigenetics 11(1):122, 2019.
Bureau A, Begum F, Taub MA, Hetmanski JB, Parker MM, Albacha-Hejazi H, Scott AF, Murray JC, Marazita ML,
Bailey-Wilson JE, Beaty TH, Ruczinski I: Inferring disease risk
genes from sequencing data in multiplex pedigrees through sharing of rare
variants. Genet Epidemiol
43(1):37-49, 2019.
Daya M, Rafaels N, Brunetti TM, ..., Taub MA, et al: Association study in
African-admixed populations across the Americas recapitulates asthma risk loci
in non-African populations. Nat Commun 10(1):880, 2019.
Kachroo P, Hecker J, Chawes BL, Ahluwalia TS,
..., National Heart, Lung, and Blood Institute Trans-Omics for Precision
Medicine (TOPMed) Consortium (includes Taub
M): Whole genome
sequencing identifies CRISPLD2 as a lung function gene in children with asthma.
Chest 156(6):1068-1079, 2019.
Keramati AR, Yanek LR, Iyer K, Taub MA, Ruczinski I, Becker DM, Becker
LC, Faraday N, Mathias RA: Targeted deep sequencing of
the PEAR1 locus for platelet aggregation in European and African American
families. Platelets
30(3):380-386, 2019.
Sherman RM, Forman J, Antonescu V, Puiu
D, ..., Taub M, et al: Assembly of a pan-genome
from deep sequencing of 910 humans of African descent. Nat Genet 51(1):30-35, 2019.
Vergara C, Thio CL, Johnson E, Kral AH,
O'Brien TR, Goedert JJ, Mangia A, Piazzolla V, Mehta
SH, Kirk GD, Kim AY, Lauer GM, Chung RT, Cox AL, Peters MG, Khakoo
SI, Alric L, Cramp ME, Donfield SM, Edlin BR, Busch MP, Alexander G, Rosen HR,
Murphy EL, Latanich R, Wojcik GL, Taub MA, Valencia A, Thomas DL, Duggal
P: Multi-ancestry
genome-wide association study of spontaneous clearance of hepatitis C virus.
Gastroenterology 156(5):1496-1507,
2019.
Carol
Thompson (go
to top of document)
Jin Q, Pandey D, Thompson
CB, Lewis S, Sung HW, Nguyen TD, Kuo S, Wilson KL, Gracias DH, Romer LH: Acute downregulation of emerin alters actomyosin cytoskeleton connectivity and
function. Biophys J 122(18):3690-3703,
2023.
Pytell JD, Li X, Thompson C, Lesko CR, McCaul ME,
Hutton H, Scott Batey D, Cachay E, Mayer KH, Napravnik
S, Christopoulos K, Yang C, Crane HM, Chander G, Lau B:
The temporal relationship
of alcohol use and subsequent self-reported health status among people with HIV.
Am J Med Open 9:100020, 2023.
Singh B, Berry J, Volovsky
M, Xu Y, Soliman AM, Thompson CB, Segars JH: The utility and impact of the
Painful Periods Screening Tool (PPST) to improve healthcare delivery for people
with symptoms of pelvic pain. Reprod
Sci 30(5):1676-1683, 2023.
Aboumatar H, Thompson C, Garcia-Morales E, Gurses AP, Naqibuddin M, Saunders
J, Kim SW, AWise R: Perspective on reducing errors
in research. Contemp Clin Trials Commun
23:100838, 2021.
Askenase
MH, Goods BA, Beatty HE, Steinschneider AF, ..., Thompson RE, ..., ICHseq Investigators MISTIE III Investigators (includes Thompson
C): Longitudinal
transcriptomics define the stages of myeloid activation in the living human
brain after intracerebral hemorrhage. Sci Immunol 6(56):eabd6279,
2021.
Gusdon
AM, Thompson CB, Quirk K, Mayasi YM, Avadhani R, Awad IA, Hanley DF,
Ziai WC: CSF and serum
inflammatory response and association with outcomes in spontaneous
intracerebral hemorrhage with intraventricular extension: an analysis of the
CLEAR-III Trial. J Neuroinflammation 18(1):179, 2021.
Messing BP, Ward EC, Lazarus C, Ryniak K, Maloney
J, Thompson CB, Kramer E: Longitudinal comparisons of a
whole-mouth taste test to clinician-rated and patient-reported outcomes of
dysgeusia postradiotherapy in patients with head and neck cancer and
associations with oral intake. Head Neck 43(7):2159-2177, 2021.
Ziai WC, Parry-Jones AR, Thompson CB,
Sansing LH, Mullen MT, Murthy SB, Mould A, Nekoovaght-Tak S, Hanley DF: Early inflammatory cytokine
expression in cerebrospinal fluid of patients with spontaneous intraventricular
hemorrhage. Biomolecules 11(8):1123, 2021.
Stachelek GC, McNutt T, Thompson CB, Smith
K, DeWeese TL, Song DY: Improvements
in physician clinical workflow measures after implementation of a dashboard
program. Pract Radiat
Oncol 10(3):151-157, 2020.
Weston CM, Terkowitz MS, Thompson
CB, Ford DE: Approaches
to measuring trends in interdisciplinary research publications at one academic
medical center. Acad Med
95(4):637-643, 2020.
Aboumatar H, Naqibuddin
M, Chung S, Chaudhry H, Kim SW, Saunders J, Bone L, Gurses AP, Knowlton A,
Pronovost P, Putcha N, Rand C, Roter D, Sylvester C, Thompson C, Wolff JL, Hibbard J, Wise RA: Effect of a
hospital-initiated program combining transitional care and long-term
self-management support on outcomes of patients hospitalized with chronic
obstructive pulmonary disease: a randomized clinical trial. JAMA 322(14):1371-1380, 2019.
Hanley DF, Thompson RE, Rosenblum M, Yenokyan G,
..., Betz JF, Sugar EA, ..., MISTIE III Investigators (includes Thompson CB): Efficacy and safety of
minimally invasive surgery with thrombolysis in intracerebral haemorrhage evacuation (MISTIE III): a randomised,
controlled, open-label, blinded endpoint phase 3 trial. Lancet 393(10175):1021-1032, 2019.
Hutton HE, Lesko CR, Li X, Thompson CB, Lau
B, Napravnik S, Mayer KH, Mathews WC, McCaul ME,
Crane HM, Fredericksen RJ, Cropsey KL, Saag M, Christopoulos K, Chander G: Alcohol use patterns and
subsequent sexual behaviors among women, men who have sex with men and men who
have sex with women engaged in routine HIV care in the United States. AIDS Behav
23(6):1634-1646, 2019.
Messing BP, Ward EC, Lazarus C, Ryniak K, Kim M, Silinonte J, Gold D, Thompson
CB, Pitman KT, Blanco R, Sobel R, Harrer K, Ulmer K, Neuner G, Patel K, Tang M,
Lee G: Establishing a
multidisciplinary head and neck clinical pathway: an implementation evaluation
and audit of dysphagia-related services and outcomes. Dysphagia 34(1):89-104, 2019.
Ullman NL, Tahsili-Fahadan
P, Thompson CB, Ziai WC, Hanley DF: Third ventricle obstruction
by thalamic intracerebral hemorrhage predicts poor functional outcome among
patients treated with alteplase in the CLEAR III Trial. Neurocrit Care 30(2):380-386, 2019.
Ziai WC, McBee N, Lane K, Lees KR, Dawson J, Vespa
P, Thompson RE, Mendelow AD, Kase CS, Carhuapoma JR, Thompson CB, Mayo SW, Reilly P, Janis
S, Anderson CS, Harrigan MR, Camarata PJ, Caron JL, Zuccarello M, Awad IA,
Hanley DF, MISTIE III Investigators: A randomized 500-subject
open-label phase 3 clinical trial of minimally invasive surgery plus alteplase
in intracerebral hemorrhage evacuation (MISTIE III). Int J Stroke 14(5):548-554, 2019.
Ziai WC, Thompson
CB, Mayo S, McBee N, Freeman WD, Dlugash R, Ullman N,
Hao Y, Lane K, Awad I, Hanley DF, Clot Lysis: Evaluating Accelerated Resolution
of Intraventricular Hemorrhage (CLEAR III) Investigators: Intracranial hypertension
and cerebral perfusion pressure insults in adult hypertensive intraventricular
hemorrhage: occurrence and associations with outcome. Crit Care Med 47(8):1125-1134, 2019.
Richard
Thompson (go
to top of document)
Avadhani R, Ziai WC, Thompson RE, Mould WA, Lane K, Nanni A, Iacobelli M, Sharrock MF,
Sansing LH, Van Eldik LJ, Hanley DF, BEACH trial
consortium: Clinical trial
protocol for BEACH: a phase 2a study of MW189 in patients with acute
nontraumatic intracerebral hemorrhage. Neurocrit
Care 40(2):807-815, 2024.
Baumann ME, Haddad NR, Salazar A, Childers WL,
Farrokhi S, Goldstein NB, Hendershot BD, Reider L, Thompson RE, Valerio
MS, Dearth CL, Garza LA, Major Extremity Trauma Research Consortium (METRC): Testing the reliability of
optical coherence tomography to measure epidermal thickness and distinguish
volar and nonvolar skin. JID Innov 4(4):100276, 2024.
Casella JF, Furstenau DK, Adams RJ, Brambilla DJ, Lebensburger JD, ..., Thompson RE, et al: Hydroxyurea to prevent brain
injury in children with sickle cell disease (HU Prevent)-a randomized,
placebo-controlled phase II feasibility/pilot study. Am J Hematol 99(10):1906-1916,
2024.
Eyob E, Shaw JS, Bakker A, Munro C, Spira A, Wu M,
Rabinowitz JA, Peters M, Wanigatunga S, Zipunnikov V, Thompson R, Burhanullah MH, Leoutsakos
JM, Rosenberg P, Greenberg B: A randomized-controlled trial
targeting cognition in early Alzheimer's disease by improving sleep with
trazodone (REST). J Alzheimers Dis
101(s1):S205-S215, 2024.
Flemming KD, Kim H, Hage S, ..., Thompson R,
et al: Trial readiness of
cavernous malformations with symptomatic hemorrhage, part I: event rates and
clinical outcome. Stroke 55(1):22-30, 2024.
Hage S, Kinkade S, Girard R, Flemming KD, ..., Thompson
RE, et al: Trial readiness
of cavernous malformations with symptomatic hemorrhage, part II: biomarkers and
trial modeling. Stroke 55(1):31-39, 2024.
Alkon DL, Sun MK, Tuchman AJ, Thompson RE: Advanced Alzheimer's disease
patients show safe, significant, and persistent benefit in 6-month bryostatin trial. J Alzheimers
Dis 96(2):759-766, 2023.
Yeo TP, Cannaday S, Thompson RE, Fogg R, Nevler A, Lavu H, Yeo CJ: Distress, depression, and the
effect of ZIP code in pancreaticobiliary cancer patients and their significant
others. J Am Coll Surg 236(2):339-349, 2023.
Archer KR, Davidson CA, Alkhoury
D, Vanston SW, Moore TL, Deluca A, Betz JF, Thompson RE, Obremskey WT, Slobogean GP,
Melton DH, Wilken JM, Karunakar MA, Rivera JC, Mir HR, McKinley TO, Frey KP,
Castillo RC, Wegener ST, METRC: Cognitive-Behavioral-Based
Physical Therapy for Improving Recovery After Traumatic Orthopaedic
Lower Extremity Injury (CBPT-Trauma). J Orthop
Trauma 36(Suppl 1):S1-S7, 2022.
Gitajn
IL, Natoli RM, Spitler CA, Firoozabadi R, Tatman LM,
Gary JL, Githens MF, Thompson RE, DeLuca A, Reider L, Wysocki E, Obremskey W: Radiographic assessment of
ankle fracture displacement: a validation study. Foot Ankle Int
43(10):1269-1276, 2022.
Lane K, Majkowski R, Gruber J, Amirault D, Hillery
S, Wieber C, Thompson DD, Huvane J, Bridges J, Ryu EP, Eyzaguirre LM, Gildea M,
Thompson RE, Ford DE, Hanley D: Using gamification to enhance
clinical trial start-up activities. J Clin Trans Sci 6(1):e75, 2022.
Nelson SE, Aldrich E, Johnson B, Groman S, Thompson
RE, Urrutia V: Sustainability
of intravenous alteplase administration via telephone-based consult: data from
a US health system. J Stroke Cerebrovasc Dis
31(4):106316, 2022.
Shah VA, Thompson RE, Yenokyan G, Acosta JN,
Avadhani R, Dlugash R, McBee N, Li Y, Hansen BM,
Ullman N, Falcone G, Awad IA, Hanley DF, Ziai WC: One-year outcome trajectories
and factors associated with functional recovery among survivors of
intracerebral and intraventricular hemorrhage with initial severe disability.
JAMA Neurol 79(9):856-868, 2022.
Stinner DJ, Rivera JC, Smith CS, Weiss DB, Hymes
RA, Matuszewski PE, Gary JL, Morshed S, Schmidt AH, Wilken JM, Archer KR,
Bailey L, Kleihege J, McLaughlin KH, Thompson RE, Chung S, Remenapp C, MacKenzie
EJ, Reider L, METRC: Early
advanced weight-bearing after periarticular fractures: a randomized trial
comparing antigravity treadmill therapy versus standard of care. J Orthop Trauma 36(Suppl 1):S8-S13, 2022.
Thompson
RE, Tuchman AJ, Alkon DL: Bryostatin placebo-controlled trials indicate cognitive
restoration above baseline for advanced Alzheimer's disease in the absence of
memantine1. J Alzheimers Dis
86(3):1221-1229, 2022.
Al-Kawaz MN, Li Y, Thompson
RE, Avadhani R, de Havenon A, Gruber J, Awad I,
Hanley DF, Ziai W: Intracranial
pressure and cerebral perfusion pressure in large spontaneous intracranial
hemorrhage and impact of minimally invasive surgery. Front Neurol
12:729831, 2021.
Avadhani R, Thompson RE, Carhuapoma
L, Yenokyan G, McBee N, Lane K, Ostapkovich N,
Stadnik A, Awad IA, Hanley DF, Ziai WC: Post-stroke depression in
patients with large spontaneous intracerebral hemorrhage. J Stroke Cerebrovasc Dis 30(11):106082, 2021.
Askenase
MH, Goods BA, Beatty HE, Steinschneider AF, ..., Thompson RE, ..., ICHseq Investigators MISTIE III Investigators: Longitudinal transcriptomics
define the stages of myeloid activation in the living human brain after
intracerebral hemorrhage. Sci Immunol 6(56):eabd6279, 2021.
Jassal MS, Lewis-Land C, Thompson RE, Butz
A: Randomised
pilot trial of cash incentives for reducing paediatric
asthmatic tobacco smoke exposures from maternal caregivers and members of their
social network. Arch Dis Child 106(4):345-354, 2021.
Kim H, Flemming KD, Nelson JA, Lui A, M..., Thompson
RE, et al: Baseline
characteristics of patients with cavernous angiomas with symptomatic hemorrhage
in multisite trial readiness project. Stroke 52(12):3829-3838, 2021.
Polster SP, Carrion-Penagos J, Lyne SB, Gregson BA,
Cao Y, Thompson RE, Stadnik A, Girard R, Money PL, Lane K, McBee N, Ziai
W, Mould WA, Iqbal A, Metcalfe S, Hao Y, Dodd R,
Carlson AP, Camarata PJ, Caron JL, Harrigan MR, Zuccarello M, Mendelow AD,
Hanley DF, Awad IA: Intracerebral
hemorrhage volume reduction and timing of intervention versus functional
benefit and survival in the MISTIE III and STICH trials. Neurosurgery
88(5):961-970, 2021.
Halstead MR, Mould WA,
Sheth KN, Rosand J, Thompson R, Levy A, Hanley DF, Goldstein JN, Nyquist
P: Haptoglobin is
associated with increased early perihematoma edema
progression in spontaneous intracranial hemorrhage. Int J Stroke
15(8):899-908, 2020.
Hansen BM, Ullman N, Muschelli J, Norrving B, Dlugash R, Avadhani
R, Awad I, Zuccarello M, Ziai WC, Hanley DF, Thompson RE, Lindgren A,
MISTIE and CLEAR Investigators: Relationship of white matter
lesions with intracerebral hemorrhage expansion and functional outcome: MISTIE
II and CLEAR III. Neurocrit Care
33(2):516-524, 2020.
Jassal MS, Lewis-Land C, Thompson RE, Butz
A: Linkage of maternal
caregiver smoking behaviors on environmental and clinical outcomes of children
with asthma: a post-hoc analysis of a financial incentive trial targeting
reduction in pediatric tobacco smoke exposures. Int J Environ Res Public
Health 17(22):E8502, 2020.
Nelson SE, Mould WA,
Gandhi D, Thompson RE, Salter
S, Dlugash R, Awad IA, Hanley DF, Ziai W: Primary intraventricular
hemorrhage outcomes in the CLEAR III trial. Int J Stroke
15(8):872-880, 2020.
Pasciak AS, Abiola G, Liddell RP, Crookston N, Besharati S, Donahue D, Thompson RE, Frey E, Anders RA,
Dreher MR, Weiss CR: The
number of microspheres in Y90 radioembolization directly affects no, 2020.rmal
tissue radiation exposure. Eur J Nucl Med Mol Imaging 47(4):816-827, 2020.
Awad IA, Polster SP, Carrion-Penagos J, Thompson RE, Cao Y, Stadnik A, Money
PL, Fam MD, Koskimaki J, Girard R, Lane K, McBee N, Ziai W, Hao Y, Dodd R,
Carlson AP, Camarata PJ, Caron JL, Harrigan MR, Gregson BA, Mendelow AD,
Zuccarello M, Hanley DF, MISTIE III Trial Investigators: Surgical performance
determines functional outcome benefit in the Minimally Invasive Surgery Plus
Recombinant Tissue Plasminogen Activator for Intracerebral Hemorrhage
Evacuation (MISTIE) procedure. Neurosurgery
84(6):1157-1168, 2019.
Butz AM, Tsoukleris M,
Elizabeth Bollinger M, Jassal M, Bellin MH, Kub J, Mudd S, Ogborn CJ,
Lewis-Land C, Thompson RE: Association between second
hand smoke (SHS) exposure and caregiver stress in children with poorly
controlled asthma. J Asthma
56(9):915-926, 2019.
Casella JF, Adams RJ, Brambilla DJ, Strouse JJ,
Maier P, Dlugash R, Avadhani R, Vermillion K,
Tonascia J, Voeks JH, Hanley DF, Thompson
RE, Lehmann HP: Developing
a risk-based composite neurologic outcome for a trial of hydroxyurea in young
children with sickle cell disease. Clin
Trials 16(1):20-31, 2019.
Eslami V, Tahsili-Fahadan
P, Rivera-Lara L, Gandhi D, Ali H, Parry-Jones A, Nelson LS, Thompson RE, Nekoobakht-Tak
S, Dlugash R, McBee N, Awad I, Hanley DF, Ziai WC: Influence of intracerebral
hemorrhage location on outcomes in patients with severe intraventricular
hemorrhage. Stroke
50(7):1688-1695, 2019.
Farlow MR, Thompson
RE, Wei LJ, Tuchman AJ, Grenier E, Crockford D, Wilke S, Benison J, Alkon DL: A randomized, double-blind,
placebo-controlled, Phase II study assessing safety, tolerability, and efficacy
of bryostatin in the treatment of moderately severe
to severe Alzheimer's disease. J Alzheimers Dis 67(2):555-570, 2019.
Hanley DF, Thompson
RE, Rosenblum M, Yenokyan G, ..., Betz JF, Sugar EA, et al: Efficacy and safety of
minimally invasive surgery with thrombolysis in intracerebral haemorrhage
evacuation (MISTIE III): a randomised, controlled, open-label, blinded endpoint
phase 3 trial. Lancet
393(10175):1021-1032, 2019.
Polster SP, Cao Y, Carroll T, Flemming K, Girard R,
Hanley D, Hobson N, Kim H, Koenig J, Koskimaki J, Lane K, Majersik
JJ, McBee N, Morrison L, Shenkar R, Stadnik A, Thompson RE, Zabramski
J, Zeineddine HA, Awad IA: Trial readiness in
Cavernous Angiomas With Symptomatic Hemorrhage (CASH). Neurosurgery 84(4):954-964, 2019.
Polster SP, Stadnik A, Akers AL, Cao Y,
Christoforidis GA, Fam MD, Flemming KD, Girard R, Hobson N, Koenig JI,
Koskimaki J, Lane K, Liao JK, Lee C, Lyne SB, McBee N, Morrison L, Piedad K, Shenkar R, Sorrentino M, Thompson RE, Whitehead KJ, Zeineddine HA, Hanley DF, Awad IA: Atorvastatin treatment of
Cavernous Angiomas with Symptomatic Hemorrhage Exploratory Proof of Concept (AT
CASH EPOC) Trial. Neurosurgery 85(6):843-853, 2019.
Weiss CR, Abiola GO, Fischman AM, Cheskin LJ, Vairavamurthy J, Holly BP, Akinwande O, Nwoke F, Paudel K, Belmustakov S, Hong K, Patel RS, Shin EJ, Steele KE, Moran
TH, Thompson RE, Dunklin T, Ziessman H, Kraitchman DL, Arepally A: Bariatric Embolization of
Arteries for the Treatment of Obesity (BEAT Obesity) Trial: Results at 1 year.
Radiology 291(3):792-800, 2019.
Ziai WC, McBee N, Lane K, Lees KR, Dawson J, Vespa
P, Thompson RE, Mendelow AD, Kase
CS, Carhuapoma JR, Thompson CB, Mayo SW, Reilly P,
Janis S, Anderson CS, Harrigan MR, Camarata PJ, Caron JL, Zuccarello M, Awad
IA, Hanley DF, MISTIE III Investigators: A randomized 500-subject
open-label phase 3 clinical trial of minimally invasive surgery plus alteplase
in intracerebral hemorrhage evacuation (MISTIE III). Int J Stroke 14(5):548-554, 2019.
Jiayi
(Jessie) Tong (go
to top of document)
He X, Wei R, Huang Y, Chen Z, Lyu T,
Bost S, Tong J, Li L, Zhou Y, Li Z, Guo J, Tang H, Wang F, DeKosky S, Xu
H, Chen
Y, Zhang R, Xu J, Guo Y, Wu Y, Bian J: Develop and validate a
computable phenotype for the identification of Alzheimer's disease patients
using electronic health record data. Alzheimers
Dement 16(3):e12613, 2024.
Lu Y, Tong J, Chubak J, Lumley T, Hubbard RA, Xu H, Chen
Y: Leveraging
error-prone algorithm-derived phenotypes: enhancing association studies for
risk factors in EHR data. J Biomed Inform 157:104690, 2024.
Tong J, Luo C, Sun
Y, Duan R, Saine ME, Lin L, Peng Y, Lu Y, Batra A, Pan A, Wang O, Li R,
Marks-Anglin A, Yang
Y, Zuo X, Liu Y, Bian J, Kimmel SE, Hamilton K, Cuker
A, Hubbard RA, Xu H, Chen
Y: Confidence score: a
data-driven measure for inclusive systematic reviews considering unpublished
preprints. J Am Med Inform Assoc 31(4):809-819, 2024.
Tong J, Shen Y, Xu A, He X, Luo C, Edmondson M, Zhang D, Lu Y,
Yan C, Li R, Siegel L, Sun L, Shenkman EA, Morton SC, Malin BA, Bian J, Asch
DA, Chen
Y: Evaluating
site-of-care-related racial disparities in kidney graft failure using a novel
federated learning framework. J Am Med Inform Assoc 31(6):1303-1312,
2024.
Wu Q, Tong J, Zhang B, Zhang D,
Chen J, Lei Y, Lu Y, Wang Y, et al: Real-world effectiveness of
BNT162b2 against infection and severe diseases in children and adolescents.
Ann Intern Med 177(2):165-176, 2024.
Zhang D, Tong J, Jing N, Yang
Y, Luo C, Lu Y, Christakis DA, Guthe D, Hornig M,
Kelleher KJ, Morse KE, Rogerson CM, Divers J, Carroll RJ, Forrest CB, Chen
Y: Learning competing risks
across multiple hospitals: one-shot distributed algorithms. J Am Med
Inform Assoc 31(5):1102-1112, 2024.
Zhang D, Tong J, Stein R, Lu Y,
Jing N, Yang
Y, Boland MR, Luo C, Baldassano RN, Carroll RJ, Forrest CB, Chen
Y: One-shot distributed
algorithms for addressing heterogeneity in competing risks data across clinical
sites. J Biomedi Inform 150:104595, 2024.
Abene JA, Tong J, Minuk J, Lindenfeldar G, Chen
Y, Chao AM: Food insecurity
and binge eating: a systematic review and meta-analysis. Int J Eat Disord 56(7):1301-1322, 2023.
Djulbegovic M, Tong J, Xu A, Yang J, Chen
Y, Cuker A, Pishko AM: Adding caplacizumab
to standard of care in thrombotic thrombocytopenic purpura: a systematic review
and meta-analysis. Blood Adv 7(10):2132-2142, 2023.
Duan R, Tong J, Lin L, Levine L,
Sammel M, Stoddard J, Li T, Schmid CH, Chu H, Chen
Y: PALM: PAtient-centered treatment ranking via Large-scale
Multivariate network meta-analysis. Ann Appl Stat 17(1):815-837,
2023.
Duan R, Tong J, Sutton AJ, Asch
DA, Chu H, Schmid CH, Chen
Y: Origami plot: a novel
multivariate data visualization tool that improves radar chart. J Clin
Epidemiol 156:85-94, 2023.
Rao S, Jing N, Liu X, Lorman V, Maltenfort M, Schuchard J, Wu Q, Tong J, Razzaghi H,
Mejias A, Lee GM, Pajor NM, Schulert GS, Thacker D,
Jhaveri R, Christakis DA, Bailey LC, Forrest CB, Chen
Y: Spectrum of severity of
multisystem inflammatory syndrome in children: an EHR-based cohort study from
the RECOVER program. Sci Rep 13(1):21005, 2023.
Thaweethai T, Jolley SE, Karlson EW, Levitan EB,
Levy B, ..., RECOVER Consortium (includes Tong J): Development of a definition of
postacute sequelae of SARS-CoV-2 infection. JAMA
329(22):1934-1946, 2023.
Tong J, Duan R, Li R, Luo C, Moore JH, Zhu J, Foster GD, Volpp
KG, Yancy WS Jr, Shaw PA, Chen
Y: Quantifying and
correcting bias due to outcome dependent self-reported weights in longitudinal
study of weight loss interventions. Sci Rep 13(1):19078, 2023.
Li W, Tong J, Anjum MM, Mohammed
N, Chen
Y, Jiang X: Federated
learning algorithms for generalized mixed-effects model (GLMM) on horizontally
partitioned data from distributed sources. BMC Med Inform Decis Mak 22(1):269, 2022.
Luo C, Islam MN, Sheils NE, Buresh J,
Reps J, Schuemie MJ, Ryan PB, Edmondson M, Duan R, Tong
J, et al: DLMM as a
lossless one-shot algorithm for collaborative multi-site distributed linear
mixed models. Nat Commun 13(1):1678, 2022.
Qin BE, Cheng C, Luo C, Liu J, Xu XF, Tong
J, Yuan D, Chen
Y, Peng FH, Jiang Y: The
effect on brain volume in HIV-negative and non-transplant cryptococcal
meningitis. Med Mycol 60(9):myac068, 2022.
Tong J, Luo C, Islam MN, Sheils NE, Buresh J, Edmondson M,
Merkel PA, Lautenbach E, Duan R, Chen
Y: Distributed learning for
heterogeneous clinical data with application to integrating COVID-19 data
across 230 sites. NPJ Digit Med 5(1):76, 2022.
Zhang M, Tong J, Ma W, Luo C,
Liu H, Jiang Y, Qin L, Wang X, Yuan L, Zhang J, Peng F, Chen
Y, Li W, Jiang Y: Predictors
of lung adenocarcinoma with leptomeningeal metastases: a 2022
targeted-therapy-assisted molGPA model. Front
Oncol 12:903851, 2022.
Duan R, Chen Z, Tong J, Luo C,
Lyu T, Tao C, Maraganore D, Bian J, Chen
Y: Leverage real-world
longitudinal data in large clinical research networks for Alzheimer's disease
and related dementia (ADRD). AMIA Annu Symp Proc 2020:393-401, 2021.
Fan R, Zhang Y, Xu Y, Tong J,
Chen Z, Gu M, Fan W, Chen
Y, Peng F, Jiang Y: Serum
antinuclear antibodies associate with worse prognosis in AQP4-positive
neuromyelitis optica spectrum disorder. Brain Behav 11(1):e01865, 2021.
Luo C, Jiang Y, Du J, Tong J,
Huang J, Lo Re V 3rd, Ellenberg SS, Poland GA, Tao C, Chen
Y: Prediction of
post-vaccination Guillain-Barre syndrome using data from a passive surveillance
system. Pharmacoepidemiol Drug Saf 30(5):602-609, 2021.
Tong J, Chen Z, Duan R, Lo-Ciganic WH,
Lyu T, Tao C, Merkel PA, Kranzler HR, Bian J, Chen
Y: Identifying clinical
risk factors for opioid use disorder using a distributed algorithm to combine
real-world data from a large clinical data research network. AMIA Annu
Symp Proc 2020:1220-1229, 2021.
Yin Z, Tong J, Chen
Y, Hubbard RA, Tang CY: A
cost-effective chart review sampling design to account for phenotyping error in
electronic health records (EHR) data. J Am Med Inform Assoc 29(1):52-61,
2021.
Duan R, Luo C, Schuemie
MJ, Tong J, Liang CJ, Chang HH, Boland MR, Bian J, Xu H, Holmes JH,
Forrest CB, Morton SC, Berlin JA, Moore JH, Mahoney KB, Chen
Y: Learning from local to
global: an efficient distributed algorithm for modeling time-to-event data.
J Am Med Inform Assoc 27(7):1028-1036, 2020.
Hubbard RA, Tong J, Duan R, Chen
Y: Reducing bias due to
outcome misclassification for epidemiologic studies using EHR-derived
probabilistic phenotypes. Epidemiology 31(4):542-550, 2020.
Paydary K, Banwell E, Tong J, Chen
Y, Cuker A: Diagnostic accuracy of the
PLASMIC score in patients with suspected thrombotic thrombocytopenic purpura: a
systematic review and meta-analysis. Transfusion 60(9):2047-2057,
2020.
Tong J, Duan R, Li R, Scheuemie MJ,
Moore JH, Chen
Y: Robust-ODAL: learning
from heterogeneous health systems without sharing patient-level data. Pac
Symp Biocomput 25:695-706, 2020.
Tong J, Huang J, Chubak J, Wang X,
Moore JH, Hubbard RA, Chen
Y: An augmented estimation
procedure for EHR-based association studies accounting for differential
misclassification. J Am Med Inform Assoc 27(2):244-253, 2020.
Chiasakul T, De Jesus E, Tong J, Chen
Y, Crowther M, Garcia D, Chai-Adisaksopha C, Messe
SR, Cuker A: Inherited thrombophilia and
the risk of arterial ischemic stroke: a systematic review and meta-analysis.
J Am Heart Assoc 8(19):e012877, 2019.
Huang J, Zhang X, Tong J, Du J,
Duan R, Yang L, Moore JH, Tao C, Chen
Y: Comparing drug safety of
hepatitis C therapies using post-market data. BMC Med Inform Decis Mak 19(Suppl 4):147, 2019.
Liang J, Liu J, Fan R, Chen Z, Chen X, Tong
J, Chen
Y, Peng F, Jiang Y: Plasma
homocysteine level is associated with the expanded disability status scale in
neuromyelitis optica spectrum disorder. Neuroimmunomodulation
26(5):258-264, 2019.
Jiangxia Wang (go
to top of document)
Arbaje
AI, Hsu YJ, Keita M, Greyson S, Wang J, Werner NE, Carl K, Hohl D, Jones
K, Bowles KH, Chan KS, Marsteller JA, Gurses AP, Leff
B: Development and
validation of the Hospital-to-Home-Health Transition Quality (H3TQ) Index: A
novel measure to engage patients and home health providers in evaluating
hospital-to-home care transition quality. Qual Manag Health Care
33(3):140-148, 2024.
Brinson J, Kumar P, Wang J, Varadaraj V,
Swenor BK, Scott AW: Disparities
in eye care utilization by self-reported vision difficulty and diabetes status
in the United States. Ophthalmic Epidemiol 31(3):283-290, 2024.
Huang JJ, Channa R, Wolf RM, Dong
Y, Liang
M, Wang J, Abramoff MD, Liu TYA: Autonomous artificial
intelligence for diabetic eye disease increases access and health equity in
underserved populations. NPJ Digit Med 7(1):196, 2024.
Nugent L, Son HS, Wang J, Varadaraj V, Smith
K, Soiberman US, Srikumaran D: Racial variation in visual
impairment of patients with keratoconus at presentation. Cornea
43(1):31-37, 2024.
Sachdeva MM, Lee Y, Unlu EK, Koseoglu
ND, Cha E, Wang J, Prescott CR, Eghrari AO, Na
CH: Tandem mass tag LC-MS/MS
of aqueous humor from individuals with type 2 diabetes without retinopathy
reveals early dysregulation of synaptic proteins. Invest Ophthalmol Vis
Sci 65(3):16, 2024.
Shou BL, Venkatesh K, Chen
C, Ghidey R, Lee JH, Wang J, Channa R, Wolf
RM, Abramoff MD, Liu TYA: Risk
factors for nondiagnostic imaging in a real-world deployment of artificial
intelligence diabetic retinal examinations in an integrated healthcare system:
maximizing workflow efficiency through predictive dilation. J Diabetes
Sci Technol 18(2):302-308, 2024.
Soldan A, Wang J, Pettigrew C, Davatzikos C, Erus G, Hohman TJ,
Dumitrescu L, Bilgel M, Resnick SM, Rivera-Rivera LA,
Langhough R, Johnson SC, Benzinger T, Morris JC, Laws
SM, Fripp J, Masters CL, Albert MS: Alzheimer's disease genetic
risk and changes in brain atrophy and white matter hyperintensities in
cognitively unimpaired adults. Brain Commun
6(5):fcae276, 2024.
Son HS, Nugent L, Wang J, Varadaraj V, Smith
K, Bower KS, Mgboji G, Soiberman
US, Srikumaran D: Factors
associated with receipt of crosslinking for keratoconus. Cornea
43(2):214-220, 2024.
Awidi
AA, Wang J, Varadaraj V, Ali M, Cai CX, Sommer A, Ramulu
PY, Woreta FA: The impact of social determinants
of health on vision loss from cataracts and cataract surgery utilization in the
United States-a national tealth interview survey analysis. Am J
Ophthalmol 254:44-53, 2023.
Cai CX, Wang J, Ahmad S, Klawe J, Woreta F,
Srikumaran D, Mahoney NR, Ramulu P: National trends in surgical
subspecialisation in ophthalmology in the USA. Br J Ophthalmol
107(6):883-887, 2023.
Chen JH, Orden T, Wang J, Sowho M, Tversky J: Risk of anaphylaxis in cluster
vs standard subcutaneous multiallergen immunotherapy. Ann Allergy Asthma
Immunol 130(5):622-627, 2023.
Fermo OP, Zhang Y, Wang J, Moghekar AR: Cognitive
impairment in chronic migraine compared to pseudotumor cerebri. Neurol Neurochir Pol 57(2):189-197, 2023.
Kumar P, Brinson J, Wang J, Samuel L, Swenor
BK, Scott AW, Varadaraj V: Self-reported
vision impairment and food insecurity in the US: National Health Interview
Survey, 2011-2018. Ophthalmic Epidemiol 30(5):468-476, 2023.
Liu TYA, Wang J, Csaky
KG: Correlation between
hyperreflective foci and visual function testing in eyes with intermediate
age-related macular degeneration. Int J Retina Vitreous 9(1):24,
2023.
Maru JA, Wang J, Knight OJ, Tsou BC, Oatts
JT, Ross DA, Moore EZ, Zhang AY, Ramanathan S, Woreta FA: Barriers in ophthalmology
residency applications for students identifying as underrepresented in
medicine: A San Francisco Match analysis. J Surg Educ 80(7):971-980,
2023.
Massenzio
SS, Uhler TA, Massenzio EM, Sun E, Srikumaran D,
Clifton MM, Green LK, Sun G, Wang J, Woreta FA: Navigating the ophthalmology
& urology match with a significant other. J Surg Educ
80(1):135-142, 2023.
Miller SC, Tsou BC, Fliotsos
MJ, Legault GL, Wang J, Mondzelewski TJ,
Munson PD, Lorch A, Green LK, Kim WI, Pelton RW, Woreta FA, Justin GA: Perspectives of resident and
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C, Langefeld C, McCarthy R, Tsodikov A, Brummet C, Clauw DJ, Edwards RR, Lindquist MA, A2CPS Consortium: Statistical modeling of acute
and chronic pain patient-reported outcomes obtained from ecological momentary
assessment. Pain 165(9):1955-1965, 2024.
Mohs R, Bakker A, Rosenzweig-Lipson S, Rosenblum M,
Barton RL, Albert MS, Cohen S, Zeger S, Gallagher M: The HOPE4MCI study: A
randomized double-blind assessment of AGB101 for the treatment of MCI due to AD.
Alzheimers Dement 10(1):e12446, 2024.
Tang T, Tran D, Han D, Zeger SL, Crews DC,
Cai CX: Place, race, and
lapses in diabetic retinopathy care. JAMA Ophthalmol 142(6):581-583,
2024.
Xu
Y, Kim
JS, Hummers LK, Shah AA, Zeger SL: Causal inference using
multivariate generalized linear mixed-effects models. Biometrics
80(3):ujae100, 2024.
Cai CX, Tran D, Tang T, Liou W, Harrigian
K, Scott
E, Nagy P, Kharrazi H, Crews DC, Zeger SL: Health disparities in lapses
in diabetic retinopathy care. Ophthalmol Sci 3(3):100295, 2023.
Cowley HP, Robinette MS, Matelsky
JK, Xenes D, Kashyap A, Ibrahim NF, Robinson ML, Zeger S, Garibaldi BT,
Gray-Roncal W: Using
machine learning on clinical data to identify unexpected patterns in groups of
COVID-19 patients. Sci Rep 13(1):2236, 2023.
Dillon LW, Gui
G, Page KM, Ravindra N, Wong ZC, Andrew G, Mukherjee D, Zeger SL, et al:
DNA sequencing to detect
residual disease in adults with acute myeloid leukemia prior to hematopoietic
cell transplant. JAMA 329(9):745-755, 2023.
Fiksel
J, Gilbert
B, Wilson E, Kalter H, Kante A, Akum A, Blau D, Bassat Q, Macicame
I, Samo Gudo E, Black R, Zeger S, Amouzou
A, Datta A: Correcting for
verbal autopsy misclassification bias in cause-specific mortality estimates.
Am J Trop Med Hyg 108(5_Suppl):66-77, 2023.
Gilbert
B, Fiksel
J, Wilson E, Kalter H, Kante A, Akum A, Blau D, Bassat Q, Macicame
I, Samo Gudo E, Black R, Zeger S, Amouzou
A, Datta A: Multi-cause
calibration of verbal autopsy-based cause-specific mortality estimates of
children and neonates in Mozambique. Am J Trop Med Hyg
108(5_Suppl):78-89, 2023.
Macicame
I, Kante AM, Wilson E, Gilbert
B, Koffi A, Nhachungue S, Monjane
C, Duce P, Adriano A, Chicumbe S, Jani I, Kalter HD,
Datta A, Zeger S, Black RE, Gudo ES, Amouzou
A, COMSA-Mozambique Study Team: Countrywide mortality
surveillance for action in Mozambique: results from a national sample-based
vital statistics system for mortality and cause of death. Am J Trop Med Hyg 108(5_Suppl):5-16, 2023.
Richardson C, Perin J, Zeger S, Wigley FM,
Hummers LK, Casciola-Rosen L, Rosen A, Shah AA: Cumulative disease damage and
anti-PM/Scl antibodies are associated with a heavy burden of calcinosis in
systemic sclerosis. Rheumatology 62(11):3636-3643, 2023.
Robinson ML, Morris CP, Betz JF, Zhang Y, Bollinger
R, Wang N, Thiemann DR, Fall A, Eldesouki RE, Norton
JM, Gaston DC, Forman M, Luo CH, Zeger SL, Gupta A, Garibaldi BT,
Mostafa HH: Impact of
severe acute respiratory syndrome coronavirus 2 variants on inpatient clinical
outcome. Clin Infect Dis 76(9):1539-1549, 2023.
Selvin E, Wang D, Rooney MR, Echouffo-Tcheugui J,
Fang M, Zeger S, Sartini
J, Tang O, Coresh
J, Aurora RN, Punjabi NM: The
associations of mean glucose and time in range from continuous glucose
monitoring with HbA1c in adults with type 2 diabetes. Diabetes Technol
Ther 25(1):86-90, 2023.
Selvin E, Wang D, Rooney MR, Fang M,
Echouffo-Tcheugui JB, Zeger S, Sartini
J, Tang O, Coresh
J, Nisha Aurora R, Punjabi NM: Within-person and
between-sensor variability in continuous glucose monitoring metrics. Clin
Chem 69(2):180-188, 2023.
Sheffel A, Carter E, Zeger S, Munos MK: Association between antenatal care
facility readiness and provision of care at the client level and facility level
in five low- and middle-income countries. BMC Health Serv Res
23(1):1109, 2023.
Yan T, Mullany LC,
Subedi S, Hazel EA, Khatry SK, Mohan D, Zeger
S, Tielsch JM, LeClerq SC, Katz J: Risk factors for neonatal
mortality: an observational cohort study in Sarlahi district of rural southern
Nepal. BMJ Open 13(9):e066931, 2023.
Alcorn SR, Elledge CR, LaVigne
AW, Kleinberg L, Smith TJ, Levin AS, Fiksel
J, Zeger S, McNutt T, DeWeese TL, Wright JL: Improving providers' survival
estimates and selection of prognosis- and guidelines-appropriate treatment for
patients with symptomatic bone metastases: Development of the Bone Metastases
Ensemble Trees for Survival Decision Support Platform. J Eval Clin Pract 28(4):581-598, 2022.
Alcorn SR, LaVigne AW,
Elledge CR, Fiksel
J, Hu C, Kleinberg L, Levin A, Smith T, Cheng Z, Kim K, Rao AD, Sloan L, Page
B, Stinson SF, Voong KR, McNutt TR, Bowers MR, DeWeese TL, Zeger S,
Wright JL: Evaluation of
the clinical utility of the Bone Metastases Ensemble Trees for Survival
Decision Support Platform (BMETS-DSP): a case-based pilot assessment. JCO
Clin Cancer Inform 6:e2200082, 2022.
Arbab-Zadeh A, Zeger SL, Blumenthal RS,
Weintraub WS, Boden WE: The
rising urgency to pivot back toward Hippocratic medicine. Am J Med
135(1):49-52, 2022.
Berardi G, Frey-Law L, ..., Lindquist M, Caffo BS,
Crainiceanu C, Zeger S, ..., Taub M, et al: Multi-site observational study
to assess biomarkers for susceptibility or resilience to chronic pain: The
Acute to Chronic Pain Signatures (A2CPS) study protocol. Front Med
9:849214, 2022.
Cai CX, Klawe J, Ahmad S, Zeger SL, Wang J,
Sun G, Ramulu P, Srikumaran D: Geographic variations in
gender differences in cataract surgery volume among a national cohort of
ophthalmologists. J Cataract Refract Surg 48(9):1023-1030, 2022.
Casciola-Rosen L, Thiemann DR, Andrade F, ..., Wang
Z, Zeger S, et al: IgM
anti-ACE2 autoantibodies in severe COVID-19 activate complement and perturb
vascular endothelial function. JCI Insight 7(9):e158362, 2022.
COVID-19 Community Research Partnership (includes Zeger
S): The COVID-19 Community
Research Partnership: a multistate surveillance platform for characterizing the
epidemiology of the SARS-CoV-2 pandemic. Biol Methods Protoc 7(1):bpac033, 2022.
Feikin
DR, Higdon MM, Abu-Raddad LJ, Andrews N, Araos R, Goldberg Y, Groome MJ,
Huppert A, O'Brien KL, Smith PG, Wilder-Smith A, Zeger S, Deloria Knoll
M, Patel MK: Duration of
effectiveness of vaccines against SARS-CoV-2 infection and COVID-19 disease:
results of a systematic review and meta-regression. Lancet
399(10328):924-944, 2022.
Fiksel
J, Datta A, Amouzou
A, Zeger S: Generalized
Bayes quantification learning under dataset shift. JASA
117(540):2163-2181, 2022.
Fiksel
J, Zeger S, Datta A: A
transformation-free linear regression for compositional outcomes and predictors.
Biometrics 78(3):974-987, 2022.
Garcia Quesada M, Hetrich
MK, Zeger S, Sharma J, Na YB, Veguilla V, Karron RA, Dawood FS, Knoll
MD, SEARCh Study Team: Predictors of severe acute
respiratory syndrome coronavirus 2 seropositivity before coronavirus disease
2019 vaccination among children 0-4 years and their household members in the
SEARCh Study. Open Forum Infect Dis (10):ofac507, 2022.
Hazel EA, Mohan D, Zeger S, Mullany
LC, Tielsch JM, Khatry SK,
Subedi S, LeClerq SC, Black RE, Katz J: Demographic, socio-economic,
obstetric, and behavioral factors associated with small-and
large-for-gestational-age from a prospective, population-based pregnancy cohort
in rural Nepal: a secondary data analysis. BMC Pregnancy Childbirth
22(1):652, 2022.
Hazel EA, Mullany
LC, Zeger SL, Mohan D, Subedi S, Tielsch JM, Khatry SK, Katz J: Development of an imputation
model to recalibrate birth weights measured in the early neonatal period to
time at delivery and assessment of its impact on size-for-gestational age and
low birthweight prevalence estimates: a secondary analysis of a pregnancy
cohort in rural Nepal. BMJ Open 12(7):e060105, 2022.
Lee H, Wang
Z, Tillekeratne A, Lukish
N, Puliyadi V, Zeger S, Gallagher M, Knierim
JJ: Loss of functional
heterogeneity along the CA3 transverse axis in aging. Curr Biol
32(12):2681-2693, 2022.
Liu Q, Miao H, Li
S, Zhang P, Gerber GF, Follmann D, Ji H, Zeger SL, Chertow
DS, Quinn TC, Robinson ML, Kickler TS, Rothman RE,
Fenstermacher KZJ, Braunstein EM, Cox AL, Farci P, Fauci AS, Lusso P: Anti-PF4 antibodies associated
with disease severity in COVID-19. Proc Natl Acad
Sci 119(47):e2213361119, 2022.
McCarthy ML, Li Y, Elmi A, Wilder ME, Zheng Z, Zeger
SL: Social determinants of
health influence future health care costs in the Medicaid cohort of the
District of Columbia Study. Milbank Q 100(3):761-784, 2022.
Muhoza P, Tine R, Faye A, Gaye I, Zeger SL,
Diaw A, Gueye AB, Kante AM, Ruff A, Marx MA: A data quality assessment of
the first four years of malaria reporting in the Senegal DHIS2, 2014-2017. BMC
Health Serv Res 22(1):18, 2022.
Pattnaik
A, Mohan D, Zeger S, Kanyuka M, Kachale F, Marx MA: From raw data to a score:
comparing quantitative methods that construct multi-level composite
implementation strength scores of family planning programs in Malawi. Popul Health Metr
20(1):18, 2022.
Peacock JE Jr, Herrington DM, Edelstein
SL, Seals AL, Plumb ID, Saydah S, Lagarde WH, Runyon MS, Maguire PD, Correa A,
Weintraub WS, Wierzba TF, Sanders JW, COVID-19 Community Research Partnership
Study Group (includes Zeger S): Survey of adherence with
COVID-19 prevention behaviors during the 2020 Thanksgiving and winter holidays
among members of the COVID-19 community research partnership. J
Community Health 47(1):71-78, 2022.
Subedi S, Hazel EA, Mohan D, Zeger S, Mullany
LC, Tielsch JM, Khatry SK,
LeClerq SC, Black RE, Katz J: Prevalence and predictors of
spontaneous preterm births in Nepal: findings from a prospective,
population-based pregnancy cohort in rural Nepal-a secondary data analysis.
BMJ Open 12(12):e066934, 2022.
Wang
Z, Bowring MG, Rosen A, Garibaldi B, Zeger S, Nishimura A: Learning and predicting from
dynamic models for COVID-19 patient monitoring. Stat Sci
37(2):251-265, 2022.
Wilder ME, Zheng Z, Zeger SL, Elmi A, Katz
RJ, Li Y, Mccarthy ML: Relationship between social
determinants of health and antihypertensive medication adherence in a Medicaid
cohort. Circ Cardiovasc Qual Outcomes 15(2):e008150, 2022.
Bennett JC, Hetrich MK,
Quesada MG, Sinkevitch JN, Knoll MD, Feikin DR, Zeger SL, et al: Changes in invasive
pneumococcal disease caused by Streptococcus pneumoniae serotype 1 following
introduction of PCV10 and PCV13: findings from the PSERENADE project. Microorganisms
9(4):696, 2021.
Bowring MG, Wang
Z, Xu
Y, Betz J, Muschelli J, Garibaldi BT, Zeger SL: Outcome-stratified analysis of
biomarker trajectories for patients infected with severe acute respiratory
syndrome coronavirus 2. Am J Epidemiol 190(10):2094-2106, 2021.
Cai CX, Li Y, Zeger SL, McCarthy ML: Social determinants of health
impacting adherence to diabetic retinopathy examinations. BMJ Open
Diabetes Res Care 9(1):e002374, 2021.
Darmstadt GL, Khan NZ, Rosenstock S, Muslima H,
Parveen M, Mahmood W, Ahmed ASMNU, Chowdhury MAKA, Zeger S, Saha SK: Impact of emollient therapy
for preterm infants in the neonatal period on child neurodevelopment in
Bangladesh: an observational cohort study. J Health Popul
Nutr 40(1):24, 2021.
Datta A, Fiksel
J, Amouzou
A, Zeger SL: Regularized
Bayesian transfer learning for population-level etiological distributions. Biostatistics
22(4):836-857, 2021.
Elledge CR, LaVigne AW, Fiksel
J, Wright JL, McNutt T, Kleinberg LR, Hu C, Smith TJ, Zeger S, DeWeese
TL, Alcorn SR: External
validation of the Bone Metastases Ensemble Trees for Survival (BMETS) machine
learning model to predict survival in patients with symptomatic bone metastases.
JCO Clin Cancer Inform 5:304-314, 2021.
Fojo
AT, Lesko CR, Benke
KS, Chander G, Lau
B, Moore RD, Zandi
PP, Zeger SL: A
learning algorithm for predicting mental health symptoms and substance use.
J Psychiatr Res 134:22-29, 2021.
Garcia Quesada M, Yang Y, Bennett JC, Hayford K, Zeger
SL, et al: Serotype
distribution of remaining pneumococcal meningitis in the mature PCV10/13
period: findings from the PSERENADE Project. Microorganisms
9(4):738, 2021.
Garibaldi BT, Fiksel
J, Muschelli J, Robinson ML, Rouhizadeh M, Perin J, Schumock
G, Nagy P, Gray JH, Malapati H, Ghobadi-Krueger M, Niessen TM, Kim BS, Hill PM,
Ahmed MS, Dobkin ED, Blanding R, Abele J, Woods B, Harkness K, Thiemann DR,
Bowring MG, Shah AB, Wang MC, Bandeen-Roche K, Rosen A, Zeger SL, Gupta
A: Patient trajectories
among persons hospitalized for COVID-19 : a cohort study. Ann Intern Med
174(1):33-41, 2021.
Garibaldi BT, Wang K, Robinson ML, Zeger SL,
Bandeen-Roche K, Wang MC, Alexander GC, Gupta A, Bollinger R, Xu Y: Comparison of time to clinical
improvement with vs without remdesivir treatment in hospitalized patients with
COVID-19. JAMA Netw Open 4(3):e213071,
2021.
Kim
JS, Shah AA, Hummers LK, Zeger SL: Predicting clinical events
using Bayesian multivariate linear mixed models with application to scleroderma.
BMC Med Res Methodol 21(1):249, 2021.
Lee H, Wang
Z, Zeger SL, Gallagher M, Knierim JJ: Heterogeneity of age-related
neural hyperactivity along the CA3 transverse axis. J Neurosci 41(4):663-673, 2021.
McCarthy ML, Zheng Z, Wilder ME, Elmi A, Kulie P, Johnson S, Zeger SL: Latent class analysis to
represent social determinant of health risk groups in the Medicaid cohort of
the District of Columbia. Med Care 59(3):251-258, 2021.
McCarthy ML, Zheng Z, Wilder ME, Elmi A, Li Y, Zeger
SL: The influence of social
determinants of health on emergency departments visits in a Medicaid sample.
Ann Emerg Med 77(5):511-522, 2021.
Scully EP, Schumock
G, Fu
M, Massaccesi G, Muschelli J, Betz J, Klein EY, West
NE, Robinson M, Garibaldi BT, Bandeen-Roche K, Zeger S, Klein SL, Gupta
A: Sex and gender
differences in testing, hospital admission, clinical presentation, and drivers
of severe outcomes from COVID-19. Open Forum Infect Dis
8(9):ofab448, 2021.
Shapiro JR, Li H, Morgan R, Chen Y, Kuo H, Ning X,
Shea P, Wu C, Merport K, Saldanha R, Liu S, Abrams E, Chen Y, Kelly DC,
Sheridan-Malone E, Wang L, Zeger SL, Klein SL, Leng SX: Sex-specific effects of aging
on humoral immune responses to repeated influenza vaccination in older adults.
NPJ Vaccines 6(1):147, 2021.
Wongvibulsin S, Garibaldi BT, Antar AAR, Wen
J, Wang MC, Gupta A, Bollinger R, Xu Y, Wang K, Betz JF, Muschelli J,
Bandeen-Roche K, Zeger SL, Robinson ML: Development of Severe COVID-19
Adaptive Risk Predictor (SCARP), a calculator to predict severe disease or
death in hospitalized patients with COVID-19. Ann Intern Med
174(6):777-785, 2021.
Wu
Z, Casciola-Rosen L, Rosen A, Zeger SL: A Bayesian approach to
restricted latent class models for scientifically structured clustering of
multivariate binary outcomes. Biometrics 77(4):1431-1444, 2021.
Keller
JP, Katz J, Pokhrel AK, Bates MN, Tielsch J, Zeger
SL: A hierarchical model
for estimating the exposure-response curve by combining multiple studies of
acute lower respiratory infections in children and household fine particulate
matter air pollution. Environ Epidemiol 4(6):e119, 2020.
Alcorn SR, Elledge CR, Wright JL, Smith TJ, McNutt
TR, Fiksel
J, Zeger SL, DeWeese TL: Frequency of complicated
symptomatic bone metastasis over a breadth of operational definitions. Int
J Radiat Oncol Biol Phys 106(4):800-810, 2020.
Alcorn SR, Fiksel
J, Wright JL, Elledge CR, Smith TJ, Perng P, Saleemi S, McNutt TR, DeWeese TL, Zeger
S: Developing an improved
statistical approach for survival estimation in bone metastases management: the
Bone Metastases Ensemble Trees for Survival (BMETS) model. Int J Radiat Oncol Biol Phys 108(3):554-563, 2020.
Craig ET, Perin J, Zeger S, Curtis JR,
Bykerk VP, Bingham CO 3rd, Bartlett SJ: What does the patient global
health assessment in rheumatoid arthritis really tell us? contribution of
specific dimensions of health-related quality of life. Arthritis Care
Res 72(11):1571-1578, 2020.
Katz J, Tielsch JM, Khatry SK, Shrestha L, Breysse P,
Zeger SL, Kozuki N, Checkley
W, LeClerq SC, Mullany
LC: Impact of improved
biomass and liquid petroleum gas stoves on birth outcomes in rural Nepal:
results of 2 randomized trials. Glob Health Sci Pract
8(3):372-382, 2020.
Mecoli
CA, Perin J, Van Eyk JE, Zhu J, Fu Q, Allmon AG, Rao
Y, Zeger S, Wigley FM, Hummers LK, Shah AA: Vascular biomarkers and
digital ulcerations in systemic sclerosis: results from a randomized controlled
trial of oral treprostinil (DISTOL-1). Clin Rheumatol
39(4):1199-1205, 2020.
Wongvibulsin S, Wu KC, Zeger SL: Improving
clinical translation of machine learning approaches through clinician-tailored
visual displays of black box algorithms: development and validation. JMIR
Med Inform 8(6):e15791, 2020.
Wongvibulsin S, Zeger SL: Enabling individualised health
in learning healthcare systems. BMJ Evid Based Med 25(4):125-129,
2020.
Wu KC, Wongvibulsin S, Tao S, Ashikaga H,
Stillabower M, Dickfeld TM, Marine JE, Weiss RG,
Tomaselli GF, Zeger SL: Baseline and dynamic risk
predictors of appropriate implantable cardioverter defibrillator therapy. J
Am Heart Assoc 9(20):e017002, 2020.
Choi DH, Kitchen G, Kim
JS, Li Y, Kim K, Jeong IC, Nguyen J, Stewart KJ, Zeger SL, Searson PC: Two distinct types of sweat
profile in healthy subjects while exercising at constant power output measured
by a wearable sweat sensor. Sci Rep
9(1):17877, 2019.
Lewis JF, Zeger
SL, Li X, Mann NC, Newgard CD, Haynes S, Wood SF, Dai M, Simon AE, McCarthy ML:
Gender differences in
the quality of EMS care nationwide for chest pain and out-of-hospital cardiac
arrest. Womens Health Issues 29(2):116-124, 2019.
McCarthy ML, Haynes S, Li X, Mann NC, Newgard CD,
Lewis JF, Simon AE, Wood SF, Zeger
SL: "Make the Call,
Don't Miss a Beat" campaign: effect on emergency medical services use in
women with heart attack signs. Womens Health Issues
29(5):392-399, 2019.
Pneumonia Etiology Research for Child Health
(PERCH) Study Group (includes Zeger
S): Causes of severe
pneumonia requiring hospital admission in children without HIV infection from
Africa and Asia: the PERCH multi-country case-control study. Lancet 394(10200):757-779, 2019.
Rosen A, Zeger
SL: Precision medicine:
discovering clinically relevant and mechanistically anchored disease subgroups
at scale. J Clin Invest
129(3):944-945, 2019.
Sheffel A, Wilson E, Munos M, Zeger S: Methods
for analysis of complex survey data: an application using the Tanzanian 2015
Demographic and Health Survey and Service Provision Assessment. J Glob Health 9(2):020902, 2019.
Sheffel A, Zeger
S, Heidkamp R, Munos MK: Development
of summary indices of antenatal care service quality in Haiti, Malawi and
Tanzania. BMJ Open 9(12):e032558,
2019.
Wongvibulsin S, Wu KC, Zeger SL: Clinical
risk prediction with random forests for survival, longitudinal, and
multivariate (RF-SLAM) data analysis. BMC
Med Res Methodol 20(1):1, 2019.
Wu
Z, Casciola-Rosen L, Shah AA, Rosen A, Zeger
SL: Estimating
autoantibody signatures to detect autoimmune disease patient subsets. Biostatistics 20(1):30-47, 2019.
Ni Zhao (go
to top of document)
Dong H, Li
R, Zhao N, Dadhania DM, Suthanthiran M, Lee
JR, Ling W: Antibiotic
subclasses differentially perturb the gut microbiota in kidney transplant
recipients. Front Transplant 3:1400067, 2024.
Feng X, Patel EU, White JL, Li
S, Zhu X, Zhao N, Shi J, Park DE, Liu CM, Kaul R, Prodger JL, Quinn TC,
Grabowski MK, Tobian AAR: Association
of oral microbiome with oral human papillomavirus infection: a population study
of the National Health and Nutrition Examination Survey, 2009-2012. J
Infect Dis 230(3):726-735, 2024.
He
M, Zhao N, Satten GA: MIDASim: a fast and simple simulator for realistic
microbiome data. Microbiome 12(1):135, 2024.
Li M,
Hua X, Li
S, Wu MC, Zhao N: A
multi-bin rarefying method for evaluating alpha diversities in TCR sequencing
data. Bioinformatics 40(7):btae431, 2024.
Jiang Z, Zhang
H, Ahearn TU, Garcia-Closas M, Chatterjee N, Zhu H, Zhan X, Zhao N: The sequence kernel
association test for multicategorical outcomes. Genet Epidemiol 47(6):432-449,
2023.
Liu H, Ling W, Hua X, Moon JY, Williams-Nguyen JS,
Zhan X, Plantinga AM, Zhao N, Zhang A, Knight R, Qi Q, Burk RD, Kaplan
RC, Wu MC: Kernel-based
genetic association analysis for microbiome phenotypes identifies host genetic
drivers of beta-diversity. Microbiome 11(1):80, 2023.
Liu T, Jia F, Differding MK, Zhao N, Doyon
M, Bouchard L, Perron P, Guerin R, Masse E, Hivert
MF, Mueller NT: Pre-pregnancy
body mass index and gut microbiota of mothers and children 5 years postpartum.
Int J Obes 47(9):807-816, 2023.
Mueller NT, Liu T, Debelius J, Zhao N: The gut-brain-sleep connection
in older adults: what do we learn from the microbiome? J Gerontol A Biol
Sci Med Sci 78(10):1933-1934, 2023.
Park B, Koh H,
Patatanian M, Reyes-Caballero H, Zhao N, Meinert J, Holbrook JT,
Leinbach LI, Biswal S: The
mediating roles of the oral microbiome in saliva and subgingival sites between
e-cigarette smoking and gingival inflammation. BMC Microbiol
23(1):35, 2023.
Song H, Ling W, Zhao N, Plantinga AM, Broedlow CA, Klatt NR, Hensley-McBain T, Wu MC: Accommodating multiple
potential normalizations in microbiome associations studies. BMC
Bioinformatics 24(1):22, 2023.
Goedert JJ, Wu Z, Yonehara
CH, Frankland TB, Sinha R, Jones GS, Wan Y, Ravel J, Zhao N, Honda SA: Reusing a prepaid
health plan's fecal immunochemical tests for microbiome associations
with colorectal adenoma. Sci Rep 12(1):14801, 2022.
Jiang Z, He
M, Chen J, Zhao N, Zhan X: MiRKAT-MC: A distance-based
microbiome kernel association test with multi-categorical outcomes. Front
Genet 13:841764, 2022.
Li M, Tyx RE, Rivera AJ, Zhao N, Satten GA: What can we learn about the
bias of microbiome studies from analyzing data from mock communities? Genes
13(10):1758, 2022.
Ling W, Lu
J, Zhao N, Lulla A, Plantinga AM, Fu W, Zhang A, Liu H, Song H, Li Z,
Chen J, Randolph TW, Koay WLA, White JR, Launer LJ, Fodor AA, Meyer KA, Wu MC: Batch effects removal for
microbiome data via conditional quantile regression. Nat Commun 13(1):5418, 2022.
Mallick H, An L, Chen M, Wang P, Zhao N: Editorial: Methods for
single-cell and microbiome sequencing data. Front Genet 13:920191,
2022.
Zhang
Y, D'Souza G, Fakhry C, Bigelow EO, Usyk M, Burk RD, Zhao N: Oral human papillomavirus associated
with differences in oral microbiota beta diversity and microbiota abundance.
J Infect Dis 226(6):1098-1108, 2022.
Koh H,
Tuddenham S, Sears CL, Zhao N: Meta-analysis methods for
multiple related markers: applications to microbiome studies with the results
on multiple α-diversity indices. Stat Med 40(12):2859-2876,
2021.
Ling W, Zhao N, Plantinga AM, Launer LJ,
Fodor AA, Meyer KA, Wu MC: Powerful
and robust non-parametric association testing for microbiome data via a
zero-inflated quantile approach (ZINQ). Microbiome 9(1):181, 2021.
Mirzayi
C, Renson A, ..., Zhao N, et al: Reporting guidelines for human
microbiome research: the STORMS checklist. Nat Med 27(11):1885-1892,
2021.
Sinha R, Zhao N, Goedert JJ, Byrd DA, Wan Y,
Hua X, Hullings AG, Knight R, Breda SV, Mathijs K, de Kok TM, Ward MH, PHYTOME
consortium members: Effects
of processed meat and drinking water nitrate on oral and fecal microbial
populations in a controlled feeding study. Environ Res 197:111084,
2021.
Wilson N, Zhao N, Zhan X, Koh H,
Fu W, Chen J, Li H, Wu MC, Plantinga AM: MiRKAT: kernel machine
regression-based global association tests for the microbiome. Bioinformatics
37(11):1595-1597, 2021.
Zhang
H, Zhao N, Ahearn TU, Wheeler W, Garcia-Closas M, Chatterjee N: A mixed-model approach for
powerful testing of genetic associations with cancer risk incorporating tumor
characteristics. Biostatistics 22(4):772-788, 2021.
Zhao N, Khamash DF, Koh H,
Voskertchian A, Egbert E, Mongodin EF, White JR,
Hittle L, Colantuoni E, Milstone AM: Low diversity in nasal
microbiome associated with Staphylococcus aureus colonization and bloodstream
infections in hospitalized neonates. Open Forum Infect Dis
8(10):ofab475, 2021.
Binka E, Zhao N, Wood S, Zimmerman SL,
Thompson WR: Exercise-induced
abnormalities of regional myocardial deformation in anomalous aortic origin of
the right coronary artery. World J Pediatr Congenit Heart Surg 11(6):712-719, 2020.
Koh H, Zhao N: A
powerful microbial group association test based on the higher criticism
analysis for sparse microbial association signals. Microbiome
8(1):63, 2020.
Tuddenham SA, Koay WLA, Zhao N, White JR,
Ghanem KG, Sears CL, HIV Microbiome Re-analysis Consortium: The impact of human
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Vadim
Zipunnikov
(go
to top of document)
Callow DD, Spira AP, Zipunnikov V, Lu H,
Wanigatunga SK, Rabinowitz JA, Albert M, Bakker A, Soldan A, BIOCARD Research
Team: Sleep and physical
activity measures are associated with resting-state network segregation in
non-demented older adults. Neuroimage Clin 43:103621, 2024.
Callow DD, Zipunnikov V, Spira AP,
Wanigatunga SK, Pettigrew C, Albert M, Soldan A, BIOCARD Research Team: Actigraphy estimated sleep
moderates the relationship between physical activity and cognition in older
adults. Ment Health Phys Act 26:100573, 2024.
Eyob E, Shaw JS, Bakker A, Munro C, Spira A, Wu M,
Rabinowitz JA, Peters M, Wanigatunga S, Zipunnikov V, Thompson R, Burhanullah MH, Leoutsakos
JM, Rosenberg P, Greenberg B: A randomized-controlled trial
targeting cognition in early Alzheimer's disease by improving sleep with
trazodone (REST). J Alzheimers Dis
101(s1):S205-S215, 2024.
Kang SJ, Leroux
A, Guo W, Dey
D, Strippoli MF, Di
J, Vaucher J, Marques-Vidal P, Vollenweider P, Preisig
M, Merikangas KR, Zipunnikov V: Integrative modeling of
accelerometry-derived sleep, physical activity, and circadian rhythm domains
with current or remitted major depression. JAMA Psychiatry
81(9):911-918, 2024.
Lateef TM, Dey
D, Leroux
A, Cui L, Xiao M, Zipunnikov V, Merikangas KR: Association between electronic
diary-rated sleep, mood, energy, and stress with incident headache in a
community-based sample. Neurology 102(4):e208102, 2024.
Liu
F, Schrack J, Wanigatunga SK, Rabinowitz JA, He L, Wanigatunga AA, Zipunnikov
V, Simonsick EM, Ferrucci L, Spira AP: Comparison of sleep parameters
from wrist-worn ActiGraph and Actiwatch devices. Sleep
47(2):zsad155, 2024.
Spira AP, Liu
F, Zipunnikov V, Bilgel M, Rabinowitz JA, An
Y, Di
J, Bai
J, Wanigatunga SK, Wu MN, Lucey BP, Schrack JA, Wanigatunga AA, Rosenberg PB, Simonsick EM, Walker KA, Ferrucci L, Resnick SM: Evaluating a novel 24-hour
rest/activity rhythm marker of preclinical β-amyloid deposition. Sleep
47(5):zsae037, 2024.
Antonsdottir IM, Low DV, Chen D, Rabinowitz JA, Yue Y, Urbanek
J, Wu MN, Zeitzer JM, Rosenberg PB, Friedman LF, Sheikh JI, Yesavage
JA, Zipunnikov V, Spira AP: 24 h rest/activity rhythms in
older adults with memory impairment: associations with cognitive performance
and depressive symptomatology. Adv Biol 7(11):e2300138, 2023.
Ghosal
R, Varma VR, Volfson D, Hillel I, Urbanek
J, Hausdorff JM, Watts A, Zipunnikov V: Distributional data analysis
via quantile functions and its application to modeling digital biomarkers of
gait in Alzheimer's disease. Biostatistics 24(3):539-561, 2023.
Glaus J, Kang SJ, Guo W, Lamers F, Strippoli MF, Leroux
A, Dey
D, Plessen KJ, Vaucher J, Vollenweider P, Zipunnikov V, Merikangas KR, Preisig M: Objectively assessed sleep and
physical activity in depression subtypes and its mediating role in their
association with cardiovascular risk factors. J Psychiatr
Res 163:325-336, 2023.
Li
H, Lynn HS, Zipunnikov V: Sex and age differences in
association between physical activity and metabolic syndrome: results from
NHANES 2003-2006. Healthcare 11(8):1059, 2023.
Luken A, Desjardins MR, Moran MB, Mendelson T, Zipunnikov
V, Kirchner TR, Naughton F, Latkin C, Thrul J: Using
smartphone survey and GPS data to inform smoking cessation intervention
delivery: case study. JMIR mHealth uHealth
11:e43990, 2023.
Owusu JT, Rabinowitz JA, Tzuang
M, An Y, Kitner-Triolo M, Zipunnikov V, Wu MN, Wanigatunga SK, Schrack
JA, Thorpe RJ, Simonsick EM, Ferrucci L, Resnick SM,
Spira AP: Associations
between objectively measured sleep and cognition: main effects and interactions
with race in adults aged ≥50 years. J Gerontol A Biol Sci Med Sci
78(3):454-462, 2023.
Stapp EK, Zipunnikov V, Leroux
A, Cui L, Husky MM, Dey
D, Merikangas KR: Specificity
of affective dynamics of bipolar and major depressive disorder. Brain Behav 13(9):e3134, 2023.
Wanigatunga AA, Liu
F, Urbanek
JK, Wang
H, Di J,
Zipunnikov V, Cai Y, Dougherty RJ, Simonsick
EM, Ferrucci L, Schrack JA: Wrist-worn
accelerometry, aging, and gait speed in the Baltimore Longitudinal Study of
Aging. J Aging Phys Act 31(3):408-416, 2023.
Alfini AJ, Won J, Weiss LR, Nyhuis CC, Zipunnikov
V, Spira AP, Liu-Ambrose T, Shackman AJ, Smith JC: Cardiorespiratory fitness as a
moderator of sleep-related associations with hippocampal volume and cognition.
Brain Sci 12(10):1360, 2022.
Brown CH 4th, Yanek L, Healy R, Tsay T, Di
J, Goeddel L, Young D, Zipunnikov V, Schrack J, Cardiac Surgery Mobility
Working Group: Comparing
three wearable accelerometers to measure early activity after cardiac surgery.
JTCVS Open 11:176-191, 2022.
Ghosal
R, Ghosh S, Urbanek
J, Schrack JA, Zipunnikov V: Shape-constrained
estimation in functional regression with Bernstein polynomials. Comp
Stat Data Anal 178:107614, 2022.
Ghosal
R, Varma VR, Volfson D, Urbanek
J, Hausdorff JM, Watts A, Zipunnikov V: Scalar on time-by-distribution
regression and its application for modelling associations between daily-living
physical activity and cognitive functions in Alzheimer's Disease. Sci
Rep 12(1):11558, 2022.
Kuo
PL, An Y, Gross
AL, Tian Q, Zipunnikov V, Spira AP, Wanigatunga AA, Simonsick
EM, Ferrucci L, Resnick SM, Schrack JA: Association between walking
energy utilisation and longitudinal cognitive performance in older adults. Age
Ageing 51(12):afac240, 2022.
McDonnell EI, Zipunnikov V, Schrack JA, Goldsmith
J, Wrobel J: Registration
of 24-hour accelerometric rest-activity profiles and its application to human
chronotypes. Biol Rhythm Res 53(8):1299-1319, 2022.
Migueles
JH, Aadland E, Andersen LB, ..., External review group (includes Zipunnikov
V): GRANADA consensus on
analytical approaches to assess associations with accelerometer-determined
physical behaviours (physical activity, sedentary behaviour and sleep) in
epidemiological studies. Br J Sports Med 56(7):376-384, 2022.
Mun CJ, Nordeck C, Goodell EMA, Vandrey R, Zipunnikov
V, Dunn KE, Finan PH, Thrul J: Real-time monitoring of
cannabis and prescription opioid co-use patterns, analgesic effectiveness, and
the opioid-sparing effect of cannabis in individuals with chronic pain. J
Pain 23(11):1799-1810, 2022.
Rabinowitz JA, An Y, He L, Alfini AJ, Zipunnikov
V, Wu MN, Wanigatunga SK, Schrack JA, Jackson CL, Ferrucci L, Simonsick EM, Resnick SM, Spira AP: Associations of circadian
rest/activity rhythms with cognition in middle-aged and older adults:
demographic and genetic interactions. Front Neurosci
16:952204, 2022.
Soldan A, Alfini A, Pettigrew C, Faria A, Hou X,
Lim C, Lu H, Spira AP, Zipunnikov V, Albert M, BIOCARD Research Team: Actigraphy-estimated physical
activity is associated with functional and structural brain connectivity among
older adults. Neurobiol Aging
116:32-40, 2022.
Wanigatunga AA, Liu
F, Urbanek
JK, Wang
H, Di
J, Zipunnikov V, Cai Y, Dougherty RJ, Simonsick
EM, Ferrucci L, Schrack JA: Wrist-worn
accelerometry, aging, and gait speed in the Baltimore Longitudinal Study of
Aging. J Aging Phys Act 31(3):408-416, 2022.
Alfini A, Albert M, Faria AV, Soldan A, Pettigrew
C, Wanigatunga S, Zipunnikov V, Spira AP: Associations of actigraphic
sleep and circadian rest/activity rhythms with cognition in the early phase of
Alzheimer's disease. Sleep Adv 2(1):zpab007, 2021.
Difrancesco S, Riese H, Merikangas KR, Shou
H, Zipunnikov V, Antypa N, van Hemert AM, Schoevers RA, Penninx BWJH,
Lamers F: Sociodemographic,
health and lifestyle, sampling, and mental health determinants of 24-hour motor
activity patterns: observational study. J Med Internet Res
23(2):e20700, 2021.
Godfrey A, Vandendriessche B, Bakker JP,
Fitzer-Attas C, Gujar N, Hobbs M, Liu Q, Northcott CA, Parks V, Wood WA, Zipunnikov
V, Wagner JA, Izmailova ES: Fit-for-purpose biometric
monitoring technologies: leveraging the laboratory biomarker experience. Clin
Transl Sci 14(1):62-74, 2021.
Izmailova
ES, Wood WA, Liu Q, Zipunnikov V, Bloomfield D, Homsy J, Hoffmann SC,
Wagner JA, Menetski JP: Remote cardiac safety
monitoring through the lens of the FDA Biomarker Qualification Evidentiary
Criteria Framework: a case study analysis. Digit Biomark
5(1):103-113, 2021.
Liu F, Wanigatunga AA, Kuo
PL, Zipunnikov V, Simonsick EM, Ferrucci L,
Schrack JA: Association
between walking energetics and fragmented physical activity in mid- to
late-life. J Gerontol A Biol Sci Med Sci 76(10):e281-e289, 2021.
Rojo-Wissar DM,
Wanigatunga AA, Simonsick EM, Terracciano A, Wu MN, Zipunnikov
V, Schrack JA, Hossain S, Ferrucci L, Costa PT, Spira AP: Personality and insomnia
symptoms in older adults: the Baltimore Longitudinal Study of Aging. Sleep
44(9):zsab082, 2021.
Spira AP, Zipunnikov V, Raman R, Choi J, Di
J, Bai
J, Carlsson CM, Mintzer JE, Marshall GA, Porsteinsson
AP, Yaari R, Wanigatunga SK, Kim J, Wu MN, Aisen PS, Sperling RA, Rosenberg PB:
Brain amyloid burden, sleep,
and 24-hour rest/activity rhythms: screening findings from the Anti-Amyloid
Treatment in Asymptomatic Alzheimer's and Longitudinal Evaluation of Amyloid
Risk and Neurodegeneration Studies. Sleep Adv 2(1):zpab015, 2021.
Varma VR, Ghosal
R, Hillel I, Volfson D, Weiss J, Urbanek
J, Hausdorff JM, Zipunnikov V, Watts A: Continuous gait monitoring
discriminates community-dwelling mild Alzheimer's disease from cognitively
normal controls. Alzheimers Dement
7(1):e12131, 2021.
Wanigatunga AA, Wang H, An Y, Simonsick
EM, Tian Q, Davatzikos C, Urbanek
JK, Zipunnikov V, Spira AP, Ferrucci L, Resnick SM, Schrack JA: Association between brain
volumes and patterns of physical activity in community-dwelling older adults.
J Gerontol A Biol Sci Med Sci 76(8):1504-1511, 2021.
Alfini AJ, Schrack JA, Urbanek
JK, Wanigatunga AA, Wanigatunga SK, Zipunnikov V, Ferrucci L, Simonsick EM, Spira AP: Associations of actigraphic
sleep parameters with fatigability in older adults. J Gerontol A Biol
Sci Med Sci 75(9):e95-e102, 2020.
Atkinson JA, Song YJC, Merikangas KR, Skinner A,
Prodan A, Iorfino F, Freebairn L, Rose D, Ho N,
Crouse J, Zipunnikov V, Hickie IB: The science of complex systems
is needed to ameliorate the impacts of COVID-19 on mental health. Front
Psychiatry 11:606035, 2020.
Murray G, Gottlieb J, Hidalgo MP, Etain B, Ritter
P, Skene DJ, Garbazza C, Bullock B, Merikangas K, Zipunnikov
V, Shou
H, Gonzalez R, Scott J, Geoffroy PA, Frey BN: Measuring circadian function
in bipolar disorders: Empirical and conceptual review of physiological,
actigraphic, and self-report approaches. Bipolar Disord
22(7):693-710, 2020.
Povazan
M, Mikkelsen M, ..., Zipunnikov V, et al: Comparison of multivendor single-voxel
MR spectroscopy data acquired in healthy brain at 26 sites. Radiology
295(1):171-180, 2020.
Reider L, Bai
J, Scharfstein DO, Zipunnikov V, for METRC OUTLET Study Investigators: Methods for step count data:
determining "valid" days and quantifying fragmentation of walking
bouts. Gait Posture 81:205-212, 2020.
Schmidt AH, Di
J, Zipunnikov V, Frey KP, Scharfstein DO, OʼToole RV, Bosse MJ, Obremskey
WT, Stinner DJ, Hayda R, Karunakar MA, Hak DJ, Carroll EA, Collins SCJ, MacKenzie
EJ, METRC: Perfusion
pressure lacks diagnostic specificity for the diagnosis of acute compartment
syndrome. J Orthop Trauma 34(6):287-293,
2020.
Schrack JA, Wanigatunga AA, Zipunnikov V, Kuo
PL, Simonsick EM, Ferrucci L: Longitudinal association
between energy regulation and fatigability in mid-to-late life. J
Gerontol A Biol Sci Med Sci 75(9):e74-e80, 2020.
Smirnova E, Leroux
A, Cao Q, Tabacu L, Zipunnikov V, Crainiceanu C, Urbanek
JK: The predictive
performance of objective measures of physical activity derived from
accelerometry data for 5-year all-cause mortality in older adults: National
Health and Nutritional Examination Survey 2003-2006. J Gerontol A Biol
Sci Med Sci 75(9):1779-1785, 2020.
Benadjaoud MA, Menai M, van Hees VT, Zipunnikov V, Regnaux
JP, Kivimaki M, Singh-Manoux A, Sabia S: The association between
accelerometer-assessed physical activity and respiratory function in older
adults differs between smokers and non-smokers. Sci Rep 9(1):10270, 2019.
Di
J, Spira A, Bai
J, Urbanek
J, Leroux
A, Wu M, Resnick S, Simonsick E, Ferrucci L, Schrack
J, Zipunnikov V: Joint and
individual representation of domains of physical activity, sleep, and circadian
rhythmicity. Stat Biosci
11(2):371-402, 2019.
Huang
L, Bai
J, Ivanescu A, Harris T, Maurer M, Green P, Zipunnikov V: Multilevel
matrix-variate analysis and its application to accelerometry-measured physical
activity in clinical populations. JASA
114(526):553-564, 2019.
Johns
JT, Crainiceanu C, Zipunnikov V, Gellar
J: Variable-domain
functional principal component analysis. J Comp Graph Stat
28(4):993-1006, 2019.
Johns
JT, Di
J, Merikangas K, Cui L, Swendsen J, Zipunnikov
V: Fragmentation as a
novel measure of stability in normalized trajectories of mood and attention
measured by ecological momentary assessment. Psychol Assess 31(3):329-339, 2019.
Karas
M, Bai
J, Straczkiewicz M, Harezlak
J, Glynn NW, Harris T, Zipunnikov V,
Crainiceanu C, Urbanek
JK: Accelerometry data
in health research: challenges and opportunities. Stat Biosci 11(2):210-237, 2019.
Leroux
A, Di
J, Smirnova E, McGuffey EJ, Cao Q, Bayatmokhtari E,
Tabacu L, Zipunnikov V, Urbanek
JK, Crainiceanu C: Organizing
and analyzing the activity data in NHANES. Stat Biosci 11(2):262-287, 2019.
Merikangas KR, Swendsen J, Hickie IB, Cui L, Shou
H, Merikangas AK, Zhang J, Lamers F, Crainiceanu C, Volkow ND, Zipunnikov V: Real-time mobile monitoring
of the dynamic associations among motor activity, energy, mood, and sleep in
adults with bipolar disorder. JAMA
Psychiatry 76(2):190-198, 2019.
Mikkelsen M, Rimbault DL, ..., Zipunnikov V, et al:Big GABA II:
Water-referenced edited MR spectroscopy at 25 research sites. Neuroimage 191:537-548, 2019.
Schrack JA, Kuo
PL, Wanigatunga AA, Di
J, Simonsick EM, Spira AP, Ferrucci L, Zipunnikov V: Active-to-sedentary
behavior transitions, fatigability, and physical functioning in older adults.
J Gerontol A Biol Sci Med Sci
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